Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Dothistroma_20septosporum_20[genbank_20GCA_5F002236475.1_202017-07-
28] 296 sequences; 30,157,647 total letters
Query= NC_032255.1
Length=112536
Score E
Sequences producing significant alignments: (Bits) Value
seq253 123 2e-23
seq199 118 8e-22
seq22 89.7 4e-13
>seq253
Length=1263309
Score = 123 bits (136), Expect = 2e-23
Identities = 155/213 (73%), Gaps = 0/213 (0%)
Strand=Plus/Minus
Query 44125 CAACACCAGGTGAAGCGTGCTCTCCTTTTGGATGTTGTAATCGGCGAGTTGGCGCTCGTC 44184
|| ||||| ||| || ||| |||||| |||||||||||||| | ||| || ||||
Sbjct 702916 CAGCACCAAGTGCAGAGTGGACTCCTTCTGGATGTTGTAATCCGAAAGTGTCCGGCCGTC 702857
Query 44185 GTCCAGCTGCTTCCCGGCAAAGATCAAACGCTGCTGATCTGAAGGCACACCTTCCTTTTC 44244
|| |||||||| ||||| ||||| | ||||||||| || | || | || ||||| ||
Sbjct 702856 CTCAAGCTGCTTGCCGGCGAAGATGAGACGCTGCTGGTCCGGTGGGATGCCCTCCTTGTC 702797
Query 44245 CGTTATCTTCTGCTTCAATGTTCCTATGGTGTCGGCGGATTCCACCTCCACCGTAATCGT 44304
||||| ||| | | | || ||||||| |||||||| || | || || ||
Sbjct 702796 TTGGATCTTTGACTTGACGTTGTCGATCGTGTCGGATGATTCCACTTCGAGTGTGATGGT 702737
Query 44305 CTTTCCCGTGAGGGTCTTCACGAAGATTTGCAT 44337
||| || ||||| ||||| ||||| ||||||||
Sbjct 702736 CTTGCCGGTGAGTGTCTTGACGAAAATTTGCAT 702704
Score = 113 bits (124), Expect = 3e-20
Identities = 137/187 (73%), Gaps = 0/187 (0%)
Strand=Plus/Minus
Query 44129 ACCAGGTGAAGCGTGCTCTCCTTTTGGATGTTGTAATCGGCGAGTTGGCGCTCGTCGTCC 44188
|| || || || ||||||||||| ||||||||||| |||| ||| ||| |||| ||
Sbjct 702456 ACGAGATGGAGAGTGCTCTCCTTCTGGATGTTGTAGTCGGAGAGGGTGCGACCGTCCTCG 702397
Query 44189 AGCTGCTTCCCGGCAAAGATCAAACGCTGCTGATCTGAAGGCACACCTTCCTTTTCCGTT 44248
|||||||| || || || ||||| || ||||| || | || | |||||||| |||
Sbjct 702396 AGCTGCTTGCCTGCGAAAATCAAGCGTTGCTGGTCAGGTGGAATGCCTTCCTTATCCTGG 702337
Query 44249 ATCTTCTGCTTCAATGTTCCTATGGTGTCGGCGGATTCCACCTCCACCGTAATCGTCTTT 44308
||||| ||||| | | |||||||||| || || ||||| | ||||| |||||
Sbjct 702336 ATCTTGCTCTTCACATTGTCGATGGTGTCGGACGACTCAACCTCGAGGGTAATGGTCTTG 702277
Query 44309 CCCGTGA 44315
|| ||||
Sbjct 702276 CCGGTGA 702270
Score = 111 bits (122), Expect = 1e-19
Identities = 153/212 (72%), Gaps = 4/212 (2%)
Strand=Plus/Minus
Query 44128 CACCAGGTGAAGCGTGCTCTCCTTTTGGATGTTGTAATCGGCGAGTTGGCGCTCGTCGTC 44187
||||| ||| || || || || ||||||||||| |||| || || | || ||
Sbjct 702685 CACCAAGTGGAGAGTCGATTCTTTCTGGATGTTGTAGTCGGACAGAGTACGACCATCCTC 702626
Query 44188 CAGCTGCTTCCCGGCAAAGATCAAACGCTGCTGATCTGAAGGCACACCTTCCTTTTCCGT 44247
|||||||| || ||||| |||| |||||||| || | || | ||| ||||| |||
Sbjct 702625 GAGCTGCTTGCCTGCAAAAATCAGGCGCTGCTGGTCAGGTGGGATACCCTCCTTGTCCTG 702566
Query 44248 TATCTTCTGCTT--CAATGTTCCTATGGTGTCGGCGGATTCCACCTCCACCGTAATCGTC 44305
|||||| ||| || ||| | ||||||||| ||| || ||||| | || || |||
Sbjct 702565 GATCTTCGACTTGACATTGT--CGATGGTGTCGCTGGACTCGACCTCGAGGGTGATGGTC 702508
Query 44306 TTTCCCGTGAGGGTCTTCACGAAGATTTGCAT 44337
|| || ||||| ||||| |||||||| |||||
Sbjct 702507 TTGCCGGTGAGAGTCTTGACGAAGATCTGCAT 702476
>seq199
Length=410581
Score = 118 bits (130), Expect = 8e-22
Identities = 145/196 (74%), Gaps = 4/196 (2%)
Strand=Plus/Minus
Query 44142 TGCTCTCCTTTTGGATGTTGTAATCGGCGAGTTGGCGCTCGTCGTCCAGCTGCTTCCCGG 44201
||| | |||| ||||||||||| |||| ||| ||| | || |||| |||||| || |
Sbjct 250864 TGCACACCTTCTGGATGTTGTAGTCGGAGAGGGTGCGACCATCCTCCAACTGCTTTCCAG 250805
Query 44202 CAAAGATCAAACGCTGCTGATCTGAAGGCACACCTTCCTTTTCCGTTATCTTCTGCTT-- 44259
| ||||||||||||||||| || | || | || ||||| ||| ||||| |||
Sbjct 250804 CGAAGATCAAACGCTGCTGGTCCGGTGGGATTCCCTCCTTGTCCTGGATCTTGCTCTTGA 250745
Query 44260 CAATGTTCCTATGGTGTCGGCGGATTCCACCTCCACCGTAATCGTCTTTCCCGTGAGGGT 44319
|| ||| | ||||||||| || || ||||| | ||| || ||||| || ||||||||
Sbjct 250744 CATTGT--CGATGGTGTCGCTCGACTCGACCTCGAGCGTGATGGTCTTGCCAGTGAGGGT 250687
Query 44320 CTTCACGAAGATTTGC 44335
||| |||||| | |||
Sbjct 250686 CTTTACGAAGCTGTGC 250671
>seq22
Length=805712
Score = 89.7 bits (98), Expect = 4e-13
Identities = 91/119 (76%), Gaps = 0/119 (0%)
Strand=Plus/Plus
Query 44129 ACCAGGTGAAGCGTGCTCTCCTTTTGGATGTTGTAATCGGCGAGTTGGCGCTCGTCGTCC 44188
|| ||||| || ||||||||||| || |||||||| |||| ||| ||| | || ||
Sbjct 590047 ACGAGGTGGAGGGTGCTCTCCTTCTGAATGTTGTAGTCGGAGAGGGTGCGGCCATCCTCG 590106
Query 44189 AGCTGCTTCCCGGCAAAGATCAAACGCTGCTGATCTGAAGGCACACCTTCCTTTTCCGT 44247
|||||||| ||||| |||||||| |||||||| || | || | || ||||| || ||
Sbjct 590107 AGCTGCTTGCCGGCGAAGATCAAGCGCTGCTGGTCCGGTGGAATTCCCTCCTTGTCTGT 590165
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 359989101334632
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |