Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Dothistroma_20septosporum_20[genbank_20GCA_5F002236475.1_202017-07-
28] 296 sequences; 30,157,647 total letters
Query= NC_033775.1
Length=376207
Score E
Sequences producing significant alignments: (Bits) Value
seq253 163 7e-35
seq199 122 2e-22
>seq253
Length=1263309
Score = 163 bits (180), Expect = 7e-35
Identities = 160/205 (78%), Gaps = 1/205 (0%)
Strand=Plus/Plus
Query 177924 CAAATTTTCGTGAAAACTCTCACAGGAAAAACGATCACCCTCGAGGTGGAAAGCTCAGAC 177983
||||||||||| || || ||||| || || || ||||| ||||| |||||| || |||
Sbjct 702707 CAAATTTTCGTCAAGACACTCACCGGCAAGACCATCACACTCGAAGTGGAATCATCCGAC 702766
Query 177984 ACCATCGAGAACGTCAAACAAAAGATTCAGGACAAAGAAGGAATCCCTCCGGACCAGCAA 178043
|| ||||| |||||||| |||||| || ||||| || || ||||| |||||||||||
Sbjct 702767 ACGATCGACAACGTCAAGTCAAAGATCCAAGACAAGGAGGGCATCCCACCGGACCAGCAG 702826
Query 178044 CGACTTATCTTCGCCGGAAAACAGCTCGAAGATGGAAGGACTCTTGCCGATTATAACGTC 178103
|| || ||||||||||| || ||||| || || || |||| ||| | ||||| ||| ||
Sbjct 702827 CGTCTCATCTTCGCCGGCAAGCAGCTTGAGGACGGCCGGACACTTTCGGATTACAACATC 702886
Query 178104 CAAAAAGAATCAACACTGCATCTTG 178128
|| || || || || ||||| ||||
Sbjct 702887 CAGAAGGAGTCCACTCTGCA-CTTG 702910
Score = 145 bits (160), Expect = 2e-29
Identities = 156/205 (76%), Gaps = 1/205 (0%)
Strand=Plus/Plus
Query 177924 CAAATTTTCGTGAAAACTCTCACAGGAAAAACGATCACCCTCGAGGTGGAAAGCTCAGAC 177983
|| || ||||| || |||||||| || || || |||||||||||||| || | |||
Sbjct 702479 CAGATCTTCGTCAAGACTCTCACCGGCAAGACCATCACCCTCGAGGTCGAGTCCAGCGAC 702538
Query 177984 ACCATCGAGAACGTCAAACAAAAGATTCAGGACAAAGAAGGAATCCCTCCGGACCAGCAA 178043
|||||||| || ||||| ||||| |||||||| || || ||||| || ||||||||
Sbjct 702539 ACCATCGACAATGTCAAGTCGAAGATCCAGGACAAGGAGGGTATCCCACCTGACCAGCAG 702598
Query 178044 CGACTTATCTTCGCCGGAAAACAGCTCGAAGATGGAAGGACTCTTGCCGATTATAACGTC 178103
|| || || || || || || |||||||| ||||| | ||||| |||| || ||| ||
Sbjct 702599 CGCCTGATTTTTGCAGGCAAGCAGCTCGAGGATGGTCGTACTCTGTCCGACTACAACATC 702658
Query 178104 CAAAAAGAATCAACACTGCATCTTG 178128
|| |||||||| || || || ||||
Sbjct 702659 CAGAAAGAATCGACTCTCCA-CTTG 702682
Score = 104 bits (114), Expect = 6e-17
Identities = 135/187 (72%), Gaps = 0/187 (0%)
Strand=Plus/Plus
Query 177943 TCACAGGAAAAACGATCACCCTCGAGGTGGAAAGCTCAGACACCATCGAGAACGTCAAAC 178002
|||| || || || || ||||||||||| || || ||||||||||| || || ||
Sbjct 702270 TCACCGGCAAGACCATTACCCTCGAGGTTGAGTCGTCCGACACCATCGACAATGTGAAGA 702329
Query 178003 AAAAGATTCAGGACAAAGAAGGAATCCCTCCGGACCAGCAACGACTTATCTTCGCCGGAA 178062
||||| ||||| || ||||| || || || ||||||||||| | || ||||| || |
Sbjct 702330 GCAAGATCCAGGATAAGGAAGGCATTCCACCTGACCAGCAACGCTTGATTTTCGCAGGCA 702389
Query 178063 AACAGCTCGAAGATGGAAGGACTCTTGCCGATTATAACGTCCAAAAAGAATCAACACTGC 178122
| |||||||| || || | || || |||| || ||| |||| || || || || |
Sbjct 702390 AGCAGCTCGAGGACGGTCGCACCCTCTCCGACTACAACATCCAGAAGGAGAGCACTCTCC 702449
Query 178123 ATCTTGT 178129
|||| ||
Sbjct 702450 ATCTCGT 702456
>seq199
Length=410581
Score = 122 bits (134), Expect = 2e-22
Identities = 137/182 (75%), Gaps = 6/182 (3%)
Strand=Plus/Plus
Query 177930 TTCGTGAAAACTCTCACAGGAAAAACGATCACCCTCGAGGTGGAA---AGCTCAGACACC 177986
||||| || || ||||| || || || ||||| |||||||| || ||| ||||||
Sbjct 250678 TTCGTAAAGACCCTCACTGGCAAGACCATCACGCTCGAGGTCGAGTCGAGC---GACACC 250734
Query 177987 ATCGAGAACGTCAAACAAAAGATTCAGGACAAAGAAGGAATCCCTCCGGACCAGCAACGA 178046
||||| || ||||| ||||| |||||||| || |||||||| ||||||||||| ||
Sbjct 250735 ATCGACAATGTCAAGAGCAAGATCCAGGACAAGGAGGGAATCCCACCGGACCAGCAGCGT 250794
Query 178047 CTTATCTTCGCCGGAAAACAGCTCGAAGATGGAAGGACTCTTGCCGATTATAACGTCCAA 178106
| |||||||| ||||| ||| | || ||||| | || || |||| || ||| ||||
Sbjct 250795 TTGATCTTCGCTGGAAAGCAGTTGGAGGATGGTCGCACCCTCTCCGACTACAACATCCAG 250854
Query 178107 AA 178108
||
Sbjct 250855 AA 250856
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 1203726634849424
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |