Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Dothistroma_20septosporum_20[genbank_20GCA_5F002236485.1_202017-07-
28] 343 sequences; 30,616,651 total letters
Query= NC_002593.1
Length=100999
Score E
Sequences producing significant alignments: (Bits) Value
seq33 140 2e-28
seq332 102 5e-17
>seq33
Length=763136
Score = 140 bits (154), Expect = 2e-28
Identities = 158/212 (75%), Gaps = 0/212 (0%)
Strand=Plus/Minus
Query 34178 AGCACCAGGTGTAAAGTACTTTCTTTCTGTATGTTGTAGTCGGACAGCTGACGGTCGTCG 34237
||||||| ||| | ||| ||||||||| ||||||||||| ||||| ||| | ||
Sbjct 708508 AGCACCAAGTGGAGAGTCGATTCTTTCTGGATGTTGTAGTCCGACAGAGTACGACCATCC 708449
Query 34238 TCCAACTGCTTGCCTGCGAAAATGAGCCGCTGCTGGTCGACGGGCACGCTCTCCTTGTCG 34297
|| | |||||||||||| ||||| || ||||||||||| || | | |||||||||
Sbjct 708448 TCGAGCTGCTTGCCTGCAAAAATCAGGCGCTGCTGGTCAGGTGGGATACCCTCCTTGTCC 708389
Query 34298 GCTATCTTTTGCTTTAGATCGGCTATCGAATCGGTCGATTCGACGTCCACCGTGATGGTT 34357
||||| ||| | || | | || | ||| | || ||||| || | ||||||||
Sbjct 708388 TGGATCTTCGACTTGACATTGTCGATGGTGTCGCTGGACTCGACCTCGAGGGTGATGGTC 708329
Query 34358 TTGCCGGTGAGAGTTTTCACAAAGATCTGCAT 34389
|||||||||||||| || || |||||||||||
Sbjct 708328 TTGCCGGTGAGAGTCTTGACGAAGATCTGCAT 708297
Score = 125 bits (138), Expect = 5e-24
Identities = 164/227 (72%), Gaps = 0/227 (0%)
Strand=Plus/Minus
Query 34163 CCGCCGCGCAGCCTCAGCACCAGGTGTAAAGTACTTTCTTTCTGTATGTTGTAGTCGGAC 34222
|| || || || | |||||||| ||| | ||| || ||||| |||||||| || ||
Sbjct 708751 CCTCCACGGAGACGCAGCACCAAGTGCAGAGTGGACTCCTTCTGGATGTTGTAATCCGAA 708692
Query 34223 AGCTGACGGTCGTCGTCCAACTGCTTGCCTGCGAAAATGAGCCGCTGCTGGTCGACGGGC 34282
|| ||| |||| || | ||||||||| ||||| ||||| ||||||||||| ||
Sbjct 708691 AGTGTCCGGCCGTCCTCAAGCTGCTTGCCGGCGAAGATGAGACGCTGCTGGTCCGGTGGG 708632
Query 34283 ACGCTCTCCTTGTCGGCTATCTTTTGCTTTAGATCGGCTATCGAATCGGTCGATTCGACG 34342
| || ||||||||| |||||| ||| | | | | |||| |||| ||||| ||
Sbjct 708631 ATGCCCTCCTTGTCTTGGATCTTTGACTTGACGTTGTCGATCGTGTCGGATGATTCCACT 708572
Query 34343 TCCACCGTGATGGTTTTGCCGGTGAGAGTTTTCACAAAGATCTGCAT 34389
|| | |||||||| ||||||||||| || || || || || |||||
Sbjct 708571 TCGAGTGTGATGGTCTTGCCGGTGAGTGTCTTGACGAAAATTTGCAT 708525
Score = 100 bits (110), Expect = 2e-16
Identities = 145/205 (71%), Gaps = 0/205 (0%)
Strand=Plus/Minus
Query 34163 CCGCCGCGCAGCCTCAGCACCAGGTGTAAAGTACTTTCTTTCTGTATGTTGTAGTCGGAC 34222
||||| || || | || || || || | ||| || || ||||| |||||||||||||||
Sbjct 708295 CCGCCACGAAGACGGAGGACGAGATGGAGAGTGCTCTCCTTCTGAATGTTGTAGTCGGAC 708236
Query 34223 AGCTGACGGTCGTCGTCCAACTGCTTGCCTGCGAAAATGAGCCGCTGCTGGTCGACGGGC 34282
|| || |||| || | |||||||||||||||||| | || |||||||| ||
Sbjct 708235 AGGGTGCGACCGTCCTCGAGCTGCTTGCCTGCGAAAATCAAGCGTTGCTGGTCAGGTGGA 708176
Query 34283 ACGCTCTCCTTGTCGGCTATCTTTTGCTTTAGATCGGCTATCGAATCGGTCGATTCGACG 34342
| || ||||| || ||||| ||| | || | | || | |||| ||| || ||
Sbjct 708175 ATGCCTTCCTTATCCTGGATCTTGCTCTTCACATTGTCGATGGTGTCGGACGACTCAACC 708116
Query 34343 TCCACCGTGATGGTTTTGCCGGTGA 34367
|| | || ||||| ||||||||||
Sbjct 708115 TCGAGGGTAATGGTCTTGCCGGTGA 708091
>seq332
Length=871922
Score = 102 bits (112), Expect = 5e-17
Identities = 134/186 (72%), Gaps = 0/186 (0%)
Strand=Plus/Minus
Query 34202 TTCTGTATGTTGTAGTCGGACAGCTGACGGTCGTCGTCCAACTGCTTGCCTGCGAAAATG 34261
||||| |||||||||||||| || || | || ||||||||||| || ||||| ||
Sbjct 250756 TTCTGGATGTTGTAGTCGGAGAGGGTGCGACCATCCTCCAACTGCTTTCCAGCGAAGATC 250697
Query 34262 AGCCGCTGCTGGTCGACGGGCACGCTCTCCTTGTCGGCTATCTTTTGCTTTAGATCGGCT 34321
| ||||||||||| || | | ||||||||| ||||| ||| | || | |
Sbjct 250696 AAACGCTGCTGGTCCGGTGGGATTCCCTCCTTGTCCTGGATCTTGCTCTTGACATTGTCG 250637
Query 34322 ATCGAATCGGTCGATTCGACGTCCACCGTGATGGTTTTGCCGGTGAGAGTTTTCACAAAG 34381
|| | ||| |||| ||||| || | ||||||||| ||||| ||||| || || || |||
Sbjct 250636 ATGGTGTCGCTCGACTCGACCTCGAGCGTGATGGTCTTGCCAGTGAGGGTCTTTACGAAG 250577
Query 34382 ATCTGC 34387
| |||
Sbjct 250576 CTGTGC 250571
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 323070649458080
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |