Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Dothistroma_20septosporum_20[genbank_20GCA_5F002236485.1_202017-07- 28] 343 sequences; 30,616,651 total letters Query= NC_003391.1 Length=205719 Score E Sequences producing significant alignments: (Bits) Value seq87 179 5e-40 >seq87 Length=565143 Score = 179 bits (198), Expect = 5e-40 Identities = 636/981 (65%), Gaps = 32/981 (3%) Strand=Plus/Minus Query 65736 GCAACAGATGCCAGATTACAAACGGCTACCTCATTAGCATCCGCATATTGTATTATCTCA 65795 |||| || |||||||| || || || ||||||| | | | | || | || |||||| Sbjct 64978 GCAAGCGAAGCCAGATTGCAGACAGCGACCTCATCTGGAGCAGAGTACTCCATGATCTCA 64919 Query 65796 GTGCAAAGATTACTACACTTGATGGTTCCTAAATTTTGTTGATTACTCTTTTTGTTACAC 65855 ||||| | |||| | ||||||||| || | ||| | ||||| ||||| ||| Sbjct 64918 GTGCACAAATTAGAGCTCTTGATGGTGCCAAGATTCTTCTGATTGCTCTTGCGGTTGGCG 64859 Query 65856 GCATCCTTATAAAGAATGAATGGAGTACCAGTTTCAATCTGAGATTCTATAATCGCTTTC 65915 || ||||| || |||||||| || || || || || |||| | || | ||| || | | Sbjct 64858 GCGTCCTTGTACAGAATGAAAGGTGTGCCGGTCTCGGTCTGCGCCTCGAGAATAGCATAC 64799 Query 65916 CAGAC-----GA-CTCGAGCCTTTATTATAGATTTGTATCTCTT---TTCTCTTTCGTAT 65966 || | || | ||| || | | | | | ||| |||||| || || Sbjct 64798 CATATTTTCTGAGCACGAACCGTC-TCACGG--------CCCTTGCCTTCTCTCTCATAA 64748 Query 65967 AGTGTATACAA-TCGTTCGAACTCGTCTCCCCAAACATTGTCCAATCCAGGACATTCATC 66025 | |||| || || ||||||||| || |||||| || ||||| ||||| | Sbjct 64747 CGCTCGTACAGCTCCTT-GAACTCGTCACCGTAAACATCCGACAGACCAGGGCATTCGTT 64689 Query 66026 CGGACACATCAACGACCACTCTCCGTCATCCTTCACTCGTTTCATAAAGAGATCAGGAAT 66085 || ||||||| | ||| |||| | | || || | |||||||||||| ||||| Sbjct 64688 GGGGCACATCAGAGTCCAAGTGCCGTTCTGTTCGACACGCTGCATAAAGAGATCGGGAAT 64629 Query 66086 CCAAAGAGCTATAAATAAATCTCTGGTTCTATGTTCCTCGTTTCCTGTATTCTTTTTAAG 66145 ||| ||||| || ||||| | | | | ||| || ||||| ||||| ||| Sbjct 64628 CCAGAGAGCGTAGAACAAATCGCGCGCACGAACTTCTTCCTTTCCATGGTTCTTGCGAAG 64569 Query 66146 ATCGAGGAACGCCATAATATCATAATGCCACGGTTCCAAGTATATGGCCATAACTCCAGG 66205 || | |||| ||| | || ||||||||| || | ||| ||||| | | | || || Sbjct 64568 GTCCATGAACTGCATGACGTCTGCATGCCACGGCTCAAGGTAGATGGCAAAAGCACCTGG 64509 Query 66206 CCGTTTGTTTCCTCCCTGATCTATGTATCTAGCGGTGTTATTATAAACTCTCAACATTGG 66265 || ||||| || ||||| || | ||| | ||| ||||| ||||| |||| | |||||| Sbjct 64508 ACGCTTGTTGCCACCCTGGTCAACGTAACGAGCAGTGTTGTTATAGACTCGTAGCATTGG 64449 Query 66266 AATAATACCATTGGATGTACCATTGGTCCCGGAGATATAGCTTCCACTTGCACGAATATT 66325 | || ||| |||||||| || || || ||| || || || | || | || || Sbjct 64448 TACAAGACCGTTGGATGTGCCGTTTGTGCCGCCAATGTATGAGCCTGTGGCCCTGATGTT 64389 Query 66326 ACTAA-TTGATAGACCTATTCCCCCTGCCATTTTAGAGATTAATGCGCATCGTTTTAACG 66384 || ||| ||||| || || || || | || ||||| | || ||| || | | Sbjct 64388 GTGAACATGA-AGACCAATACCGCCAGCGTTCTTGGAGATCATGGCACATATCTTGAGGG 64330 Query 66385 TATCATAGATGCCCTCTATACTATCATCCATCATGTTAAGTAGAAAACAGCTAGACATTT 66444 |||| ||||| || || || || |||||| ||||| | | || ||| || | Sbjct 64329 TATCGTAGATACCATCAATGCTGTCATCCTTCATGGCCACCAAGAAGCAG---GATGCTA 64273 Query 66445 GGTGACGACT----AGTTCCCGCATTAAATAAGGTAGGAGAAGCGTGCGTAAACCATTTT 66500 | || || || || || ||| | || | || || ||||| || || || | || Sbjct 64272 GCTG-CGCCTGTGGGGTACCAGCACTGAAAAGTGTTGGCGAAGCATGTGTGAAGTACTTC 64214 Query 66501 TCAGA-AAGTAGATTGTACGTCTCAATAGCTGAGTCTATATCCCATTGATGAATTCCTAC 66559 || | |||| ||||| |||||||| |||| || || || |||||| || || Sbjct 64213 AACGACATGTAG-TTGTATGTCTCAATCGCTGCTTCAATGTCTTCCCCATGAATGCCGAC 64155 Query 66560 TGCGACACGCATTAACATGTGCTGAGGTCTTTCAACGATCTTGTTGTTTATTTTCAACAA 66619 || |||||||| | ||| || || ||||| || | | |||| || ||| | | | Sbjct 64154 AGCCACACGCATGATCATCTGTTGCGGTCTCTCGGCAACCTTGCCGTCAATTCTGAGAAG 64095 Query 66620 GTAGGATTTTTCCAAAGTTTTAAAACCAAAATAGTTGTATGAAAAGTCTCGTTCGTAAAT 66679 ||| ||| |||| ||| || || || || || | ||| ||||| || || || | Sbjct 64094 GTATGATCGCTCCAGAGTCTTGAAGCCGAAGTACTGGTAGTTGAAGTCGCGGTCATAGAC 64035 Query 66680 AATAACCGAGTTGAGTTTATC 66700 ||| ||||||| || | ||| Sbjct 64034 AATGGCCGAGTTCAGCTCATC 64014 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 658169978084120