Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Dothistroma_20septosporum_20[genbank_20GCA_5F002236485.1_202017-07-
28] 343 sequences; 30,616,651 total letters
Query= NC_003663.2
Length=224499
Score E
Sequences producing significant alignments: (Bits) Value
seq87 167 3e-36
>seq87
Length=565143
Score = 167 bits (184), Expect = 3e-36
Identities = 628/972 (65%), Gaps = 26/972 (3%)
Strand=Plus/Minus
Query 79621 GATGCCAGATTACAAACGGCTACCTCATTAGCATCCGCATATTGTATTATTTCAGTGCAG 79680
|| |||||||| || || || ||||||| | | | | || | || || ||||||||
Sbjct 64972 GAAGCCAGATTGCAGACAGCGACCTCATCTGGAGCAGAGTACTCCATGATCTCAGTGCAC 64913
Query 79681 AGGTTACTACACTTAATGGTTCCTAAATTTTGTTGATTACTCTTTTTGTTACACGCATCC 79740
| ||| | ||| ||||| || | ||| | ||||| ||||| ||| || |||
Sbjct 64912 AAATTAGAGCTCTTGATGGTGCCAAGATTCTTCTGATTGCTCTTGCGGTTGGCGGCGTCC 64853
Query 79741 TTATAAAGAATGAACGGAGTACCAGTTTCAATCTGAGATTCTATAATCGCTTTCCAGAC- 79799
|| || |||||||| || || || || || |||| | || | ||| || | ||| |
Sbjct 64852 TTGTACAGAATGAAAGGTGTGCCGGTCTCGGTCTGCGCCTCGAGAATAGCATACCATATT 64793
Query 79800 ----GA-CTCGAGCCTTTATTATAGACTTGTATCTCTTTTCTCTTTCGTATTGTGTATAT 79854
|| | ||| || | | | | | | | |||||| || || | ||
Sbjct 64792 TTCTGAGCACGAACCGTC-TCACGGCCCT-----TGCCTTCTCTCTCATAACGCTCGTAC 64739
Query 79855 AA-TCGTTCGAACTCGTCTCCCCAAACATCGTCTAATCCAGGACATTCGTCAGGACACAT 79913
| || || ||||||||| || ||||||| | ||||| ||||||| || |||||
Sbjct 64738 AGCTCCTT-GAACTCGTCACCGTAAACATCCGACAGACCAGGGCATTCGTTGGGGCACAT 64680
Query 79914 CAACGACCACTCTCCATCATCCTTTACTCGTTTCATAAAGAGATCAGGAATCCAAAGAGC 79973
|| | ||| || | | | || || | |||||||||||| |||||||| |||||
Sbjct 64679 CAGAGTCCAAGTGCCGTTCTGTTCGACACGCTGCATAAAGAGATCGGGAATCCAGAGAGC 64620
Query 79974 TATAAATAGATCTCTGGTTCTATGCTCCTCGTTTCCTGTATTCTTTTTAAGATCGAGGAA 80033
|| | ||| | | | | || || ||||| ||||| ||| || | |||
Sbjct 64619 GTAGAACAAATCGCGCGCACGAACTTCTTCCTTTCCATGGTTCTTGCGAAGGTCCATGAA 64560
Query 80034 CGCCATAATATCAGAATGCCACGGTTCCAAGTATATGGCCATAACTCCCGGTCGTTTGTT 80093
| ||| | || | ||||||||| || | ||| ||||| | | | || || || |||||
Sbjct 64559 CTGCATGACGTCTGCATGCCACGGCTCAAGGTAGATGGCAAAAGCACCTGGACGCTTGTT 64500
Query 80094 TCCTCCCTGATCTATGTATCTAGCGGTGTTATTATAAACTCTCAACATTGGAATAATACC 80153
|| ||||| || | ||| | ||| ||||| ||||| |||| | |||||| | || |||
Sbjct 64499 GCCACCCTGGTCAACGTAACGAGCAGTGTTGTTATAGACTCGTAGCATTGGTACAAGACC 64440
Query 80154 ATTGGATGTACCATTGGTCCCGGAGATATAGCTTCCACTGGCACGAATATTACTAA-TTG 80212
|||||||| || || || ||| || || || |||| | || || || ||
Sbjct 64439 GTTGGATGTGCCGTTTGTGCCGCCAATGTATGAGCCTGTGGCCCTGATGTTGTGAACATG 64380
Query 80213 ATAGACCTATTCCCCCTGCCATTTTAGAGATTAATGCGCATCGTTTTAACGTATCATAGA 80272
| ||||| || || || || | || ||||| | || ||| || | ||||| ||||
Sbjct 64379 A-AGACCAATACCGCCAGCGTTCTTGGAGATCATGGCACATATCTTGAGGGTATCGTAGA 64321
Query 80273 TGCCCTCTATGCTATCATCAATCATGTTAAGTAGAAAACAGCTAGACATTTGGTGACGAC 80332
| || || ||||| ||||| ||||| | | || ||| || | | || || |
Sbjct 64320 TACCATCAATGCTGTCATCCTTCATGGCCACCAAGAAGCAG---GATGCTAGCTG-CGCC 64265
Query 80333 T----AGTTCCCGCATTAAATAAGGTAGGAGAAGCGTGCGTAAACCATTTTTCAGACA-G 80387
| || || ||| | || | || || ||||| || || || | || |||| |
Sbjct 64264 TGTGGGGTACCAGCACTGAAAAGTGTTGGCGAAGCATGTGTGAAGTACTTCAACGACATG 64205
Query 80388 TAGATTGTACGTCTCAATAGCTGATTCTATATCCCATTGATGAATTCCTACCGCGACACG 80447
||| ||||| |||||||| |||| ||| || || |||||| || || || |||||
Sbjct 64204 TAG-TTGTATGTCTCAATCGCTGCTTCAATGTCTTCCCCATGAATGCCGACAGCCACACG 64146
Query 80448 CATTAACATGTGCTGAGGTCTTTCAACGATCTTGTTATTTATTTTCAACAAGTAAGATTT 80507
||| | ||| || || ||||| || | | |||| | ||| | | | ||| |||
Sbjct 64145 CATGATCATCTGTTGCGGTCTCTCGGCAACCTTGCCGTCAATTCTGAGAAGGTATGATCG 64086
Query 80508 TTCCAAAGTTTTAAAACCAAAATAGTTGTATGAAAAGTCTCGTTCGTAAATAATAACCGA 80567
|||| ||| || || || || || | ||| ||||| || || || | ||| ||||
Sbjct 64085 CTCCAGAGTCTTGAAGCCGAAGTACTGGTAGTTGAAGTCGCGGTCATAGACAATGGCCGA 64026
Query 80568 GTTGAGTTTATC 80579
||| || | |||
Sbjct 64025 GTTCAGCTCATC 64014
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 718265720422520
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |