Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Dothistroma_20septosporum_20[genbank_20GCA_5F002236485.1_202017-07-
28] 343 sequences; 30,616,651 total letters
Query= NC_006549.1
Length=140131
Score E
Sequences producing significant alignments: (Bits) Value
seq33 89.7 5e-13
>seq33
Length=763136
Score = 89.7 bits (98), Expect = 5e-13
Identities = 149/212 (70%), Gaps = 4/212 (2%)
Strand=Plus/Minus
Query 94798 CACCAAGTGCAAAGTAGATTCCTTTTGCACGTTATAATCGCTCATAGTGTTGGAATCCTC 94857
||||||||| | ||| ||||| || || | ||| || || || ||| ||||||
Sbjct 708506 CACCAAGTGGAGAGTCGATTCTTTCTGGATGTTGTAGTCCGACAGAGTACGACCATCCTC 708447
Query 94858 CAGCTGTTTTCCGCCAAAGATTAATCTTTGCTGATCTGGAGGAATACCTTCTTTGTCATA 94917
||||| || || |||| || | | ||||| || || || ||||| || ||||| |
Sbjct 708446 GAGCTGCTTGCCTGCAAAAATCAGGCGCTGCTGGTCAGGTGGGATACCCTCCTTGTCCTG 708387
Query 94918 AATTTTTGCCTTGACGGCGCCGACAGTGTCAGCGTGG--TCGACGTCAATCGTGATGGTT 94975
|| || | |||||| | ||| ||||| || ||| ||||| || | ||||||||
Sbjct 708386 GATCTTCGACTTGACATTGTCGATGGTGTC-GC-TGGACTCGACCTCGAGGGTGATGGTC 708329
Query 94976 TTTCCAGTAAGAGTTTTCACAAAGATCTGCAT 95007
|| || || ||||| || || |||||||||||
Sbjct 708328 TTGCCGGTGAGAGTCTTGACGAAGATCTGCAT 708297
Score = 84.2 bits (92), Expect = 2e-11
Identities = 150/217 (69%), Gaps = 4/217 (2%)
Strand=Plus/Minus
Query 94793 CGCAACACCAAGTGCAAAGTAGATTCCTTTTGCACGTTATAATCGCTCATAGTGT--TGG 94850
|||| ||||||||||| ||| || ||||| || | ||| |||| | | ||||| |
Sbjct 708739 CGCAGCACCAAGTGCAGAGTGGACTCCTTCTGGATGTTGTAAT--CCGAAAGTGTCCGGC 708682
Query 94851 AATCCTCCAGCTGTTTTCCGCCAAAGATTAATCTTTGCTGATCTGGAGGAATACCTTCTT 94910
||||| ||||| || ||| | ||||| | | ||||| || || || || || || |
Sbjct 708681 CGTCCTCAAGCTGCTTGCCGGCGAAGATGAGACGCTGCTGGTCCGGTGGGATGCCCTCCT 708622
Query 94911 TGTCATAAATTTTTGCCTTGACGGCGCCGACAGTGTCAGCGTGGTCGACGTCAATCGTGA 94970
|||| | || |||| ||||||| | ||| ||||| | || || || | ||||
Sbjct 708621 TGTCTTGGATCTTTGACTTGACGTTGTCGATCGTGTCGGATGATTCCACTTCGAGTGTGA 708562
Query 94971 TGGTTTTTCCAGTAAGAGTTTTCACAAAGATCTGCAT 95007
|||| || || || || || || || || || |||||
Sbjct 708561 TGGTCTTGCCGGTGAGTGTCTTGACGAAAATTTGCAT 708525
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 448289277951480
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |