Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Dothistroma_20septosporum_20[genbank_20GCA_5F002236485.1_202017-07-
28] 343 sequences; 30,616,651 total letters
Query= NC_009898.1
Length=368683
Score E
Sequences producing significant alignments: (Bits) Value
seq33 134 3e-26
seq332 129 1e-24
seq198 93.3 1e-13
>seq33
Length=763136
Score = 134 bits (148), Expect = 3e-26
Identities = 166/227 (73%), Gaps = 0/227 (0%)
Strand=Plus/Minus
Query 288247 CCACCGCGGAGTCTAAGTACGAGATGAATCGTGCTTTCTTTTTGGATATTATAGTCGGCG 288306
||||| ||||| | ||| || | || | || |||||| ||||| || ||||| |
Sbjct 708523 CCACCACGGAGACGAAGCACCAAGTGGAGAGTCGATTCTTTCTGGATGTTGTAGTCCGAC 708464
Query 288307 AGCGTGCGTCCGTCTTCTAATTGTTTTCCTGCGAAGATCAGACGCTGTTGAGAATCTGGG 288366
|| || || || || || | || || ||||| || ||||| ||||| || | ||||
Sbjct 708463 AGAGTACGACCATCCTCGAGCTGCTTGCCTGCAAAAATCAGGCGCTGCTGGTCAGGTGGG 708404
Query 288367 ATTCCTTCTTTATCCTGGATTTTCGCTTTCACGTTTTCTATAGAATCGCTCGATTCTACT 288426
|| || || || |||||||| |||| || || || || || | ||||| || || ||
Sbjct 708403 ATACCCTCCTTGTCCTGGATCTTCGACTTGACATTGTCGATGGTGTCGCTGGACTCGACC 708344
Query 288427 TCGAGCGTGATCGTCTTCCCGGTCAGAGTCTTGACGAATATCTGCAT 288473
||||| ||||| ||||| ||||| |||||||||||||| ||||||||
Sbjct 708343 TCGAGGGTGATGGTCTTGCCGGTGAGAGTCTTGACGAAGATCTGCAT 708297
Score = 111 bits (122), Expect = 4e-19
Identities = 139/191 (73%), Gaps = 0/191 (0%)
Strand=Plus/Minus
Query 288283 TCTTTTTGGATATTATAGTCGGCGAGCGTGCGTCCGTCTTCTAATTGTTTTCCTGCGAAG 288342
|| || ||||| || || || | || || || ||||| || | || || || ||||||
Sbjct 708715 TCCTTCTGGATGTTGTAATCCGAAAGTGTCCGGCCGTCCTCAAGCTGCTTGCCGGCGAAG 708656
Query 288343 ATCAGACGCTGTTGAGAATCTGGGATTCCTTCTTTATCCTGGATTTTCGCTTTCACGTTT 288402
|| |||||||| || |||||| || || || || ||||| || | || |||||
Sbjct 708655 ATGAGACGCTGCTGGTCCGGTGGGATGCCCTCCTTGTCTTGGATCTTTGACTTGACGTTG 708596
Query 288403 TCTATAGAATCGCTCGATTCTACTTCGAGCGTGATCGTCTTCCCGGTCAGAGTCTTGACG 288462
|| || | ||| ||||| |||||||| ||||| ||||| ||||| || |||||||||
Sbjct 708595 TCGATCGTGTCGGATGATTCCACTTCGAGTGTGATGGTCTTGCCGGTGAGTGTCTTGACG 708536
Query 288463 AATATCTGCAT 288473
|| || |||||
Sbjct 708535 AAAATTTGCAT 708525
Score = 104 bits (114), Expect = 6e-17
Identities = 138/189 (73%), Gaps = 2/189 (1%)
Strand=Plus/Minus
Query 288262 AGTACGAGATGAATCGTGCTTTCTTTTTGGATATTATAGTCGGCGAGCGTGCGTCCGTCT 288321
|| |||||||| | ||||| || || || || || ||||||| || ||||| |||||
Sbjct 708280 AGGACGAGATGGAGAGTGCTCTCCTTCTGAATGTTGTAGTCGGACAGGGTGCGACCGTCC 708221
Query 288322 TCTAATTGTTTTCCTGCGAAGATCAGACGCTGTTGAGAATCTGGGATTCCTTCTTTATCC 288381
|| | || || |||||||| |||| || || || | ||| || ||||| ||||||
Sbjct 708220 TCGAGCTGCTTGCCTGCGAAAATCAAGCGTTGCTGGTCAGGTGGAATGCCTTCCTTATCC 708161
Query 288382 TGGATTTTCGCT-TTCACGTTTTCTATAGAATCGCTCGATTCTACTTCGAGCGTGATCGT 288440
||||| || ||| ||||| || || || | ||| ||| || || ||||| || || ||
Sbjct 708160 TGGATCTT-GCTCTTCACATTGTCGATGGTGTCGGACGACTCAACCTCGAGGGTAATGGT 708102
Query 288441 CTTCCCGGT 288449
||| |||||
Sbjct 708101 CTTGCCGGT 708093
>seq332
Length=871922
Score = 129 bits (142), Expect = 1e-24
Identities = 138/180 (77%), Gaps = 2/180 (1%)
Strand=Plus/Minus
Query 288286 TTTTGGATATTATAGTCGGCGAGCGTGCGTCCGTCTTCTAATTGTTTTCCTGCGAAGATC 288345
|| ||||| || ||||||| ||| ||||| || || || || || ||||| |||||||||
Sbjct 250756 TTCTGGATGTTGTAGTCGGAGAGGGTGCGACCATCCTCCAACTGCTTTCCAGCGAAGATC 250697
Query 288346 AGACGCTGTTGAGAATCTGGGATTCCTTCTTTATCCTGGATTTTCGCT-TTCACGTTTTC 288404
| |||||| || ||||||||| || || |||||||| || ||| || || || ||
Sbjct 250696 AAACGCTGCTGGTCCGGTGGGATTCCCTCCTTGTCCTGGATCTT-GCTCTTGACATTGTC 250638
Query 288405 TATAGAATCGCTCGATTCTACTTCGAGCGTGATCGTCTTCCCGGTCAGAGTCTTGACGAA 288464
|| | |||||||| || || ||||||||||| ||||| || || || ||||| |||||
Sbjct 250637 GATGGTGTCGCTCGACTCGACCTCGAGCGTGATGGTCTTGCCAGTGAGGGTCTTTACGAA 250578
>seq198
Length=423218
Score = 93.3 bits (102), Expect = 1e-13
Identities = 132/186 (71%), Gaps = 0/186 (0%)
Strand=Plus/Minus
Query 269155 GGTATGAATGCCGATCTCATGAATCAATATATCGAATTCGTGGCTGATCGTATCTTCACG 269214
|| ||||| || | |||||| ||||| || |||||||| || ||||| | | |
Sbjct 264492 GGGATGAACGCTGGCCTCATGTCACAATACATTGAATTCGTCGCCGATCGCCTACTGTTG 264433
Query 269215 GCACTCGGTTATGAGAAAGTGTACAATTCGAAGAATCCCTTCGCCTTTATGGAACTAATT 269274
|||||||| | |||| | ||||| | | || ||||||| ||| ||||| |||
Sbjct 264432 GCACTCGGCAACAAGAAGTTCTACAACGCCACCAACCCCTTCGACTTCATGGAGAACATT 264373
Query 269275 TCGCTCGAAGGAAAGACGAACTTCTTCGAAAAGCGTGTCAGCGACTATCAACGTCCTGGT 269334
||||| | || ||||| ||||||||||| |||||||| |||| || || |||||
Sbjct 264372 TCGCTGGGCGGCAAGACCAACTTCTTCGAGAAGCGTGTTGGCGAGTACCAGAAGGCTGGT 264313
Query 269335 GTAATG 269340
|| |||
Sbjct 264312 GTCATG 264307
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 1179649215787554
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |