Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Dothistroma_20septosporum_20[genbank_20GCA_5F002236485.1_202017-07-
28] 343 sequences; 30,616,651 total letters
Query= NC_011345.1
Length=155122
Score E
Sequences producing significant alignments: (Bits) Value
seq198 125 7e-24
seq33 93.3 4e-14
>seq198
Length=423218
Score = 125 bits (138), Expect = 7e-24
Identities = 172/238 (72%), Gaps = 2/238 (1%)
Strand=Plus/Minus
Query 52601 GAGCATGTTCAAGGAGGCGGTGGCTATCGAAAAGGAGTTTTTTACGGCCGCGCTGCCGGT 52660
|||||| ||| ||||| || | ||||| ||||||| || || | ||| || ||
Sbjct 264562 GAGCATCATCACCGAGGCCGTCACGATCGAGCAGGAGTTCTTGACAGACGCTCTTCCATG 264503
Query 52661 CGAGCTGCTGGGCATGAACGCGCAGTCCATGTGCGAGTACATCGAGTTTGTGGCGGATCG 52720
| |||| ||||| |||||||| ||||| | ||||| || || || || |||||
Sbjct 264502 CAAGCTTCTGGGGATGAACGCTGGCCTCATGTCACAATACATTGAATTCGTCGCCGATCG 264443
Query 52721 TCTGTTGGTGCAGCTCGGGCAGCCA-AAGTACTTCAACGCTCGCAATCCGTTTGAGTTTA 52779
|| || || ||||| || | | |||| || |||||| ||| || || || || |
Sbjct 264442 CCTACTGTTGGCACTCGG-CAACAAGAAGTTCTACAACGCCACCAACCCCTTCGACTTCA 264384
Query 52780 TGAACAACATTTCGCTTGAGGGCAAGACCAACTTTTTCGAGAAGCGAGTCGGCGAGTA 52837
|| | ||||||||||| | |||||||||||||| ||||||||||| || ||||||||
Sbjct 264383 TGGAGAACATTTCGCTGGGCGGCAAGACCAACTTCTTCGAGAAGCGTGTTGGCGAGTA 264326
>seq33
Length=763136
Score = 93.3 bits (102), Expect = 4e-14
Identities = 139/195 (71%), Gaps = 2/195 (1%)
Strand=Plus/Minus
Query 138421 GACTCCTTTTGAATGTTGTAGTCGCTCATAGTACGCGAGTCCTCGAGTTGTTTACCGGAA 138480
|| || || || ||||||||||| || |||||| |||||||| || || || | |
Sbjct 708490 GATTCTTTCTGGATGTTGTAGTCCGACAGAGTACGACCATCCTCGAGCTGCTTGCCTGCA 708431
Query 138481 TAGATTAGACGCTGTTGGTCCGGAGGTATACCTTCTTTGTCGGTGATTTTTTGTTTTA-A 138539
| || || ||||| ||||| || || ||||| || ||||| ||| || || | |
Sbjct 708430 AAAATCAGGCGCTGCTGGTCAGGTGGGATACCCTCCTTGTCCTGGATCTTCGACTTGACA 708371
Query 138540 TTGTTCCACGGTGTCGGTCGACTCCACCTCGACCGTCAGCGTTTTACCAGTCAGAGTTTT 138599
||| || | ||||||| | ||||| ||||||| || | || || || || ||||| ||
Sbjct 708370 TTG-TCGATGGTGTCGCTGGACTCGACCTCGAGGGTGATGGTCTTGCCGGTGAGAGTCTT 708312
Query 138600 TACAAAAATCTGCAT 138614
|| || ||||||||
Sbjct 708311 GACGAAGATCTGCAT 708297
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 496260272274960
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |