Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Dothistroma_20septosporum_20[genbank_20GCA_5F002236485.1_202017-07- 28] 343 sequences; 30,616,651 total letters Query= NC_013953.1 Length=156344 Score E Sequences producing significant alignments: (Bits) Value seq198 271 8e-68 seq33 129 6e-25 seq332 113 5e-20 seq54 84.2 2e-11 >seq198 Length=423218 Score = 271 bits (300), Expect = 8e-68 Identities = 582/859 (68%), Gaps = 17/859 (2%) Strand=Plus/Plus Query 132591 CATCACGCCAAATTTTTGATATTCGCCCACCTTTTTCTCaaaaaaaTTAGTTTTTCCCTC 132650 ||| || ||| || || || ||||| || ||||| || || || || || || | Sbjct 264307 CATGACACCAGCCTTCTGGTACTCGCCAACACGCTTCTCGAAGAAGTTGGTCTTGCCGCC 264366 Query 132651 CAAGGAAATGAGCGTCATAAAATCCAAGGGGTTGGCTGTGTTGTAG---TGCTTGGTGCC 132707 || |||||| | ||| || || |||||||||| | ||||||| | |||| |||| Sbjct 264367 CAGCGAAATGTTCTCCATGAAGTCGAAGGGGTTGGTGGCGTTGTAGAACTTCTTGTTGCC 264426 Query 132708 GATCAGGTCGACGAGCAGCCTGTCGGCCACGAACTCGATGTATTGCGACATGGTTTCGCA 132767 || | | || || || | ||||| ||||| || |||||||| |||||| | Sbjct 264427 GAGT--GCCAAC-AGTAGGCGATCGGCGACGAATTCAATGTATTGTGACATGAGGCCAGC 264483 Query 132768 ATTAAGTCCCAGCAGAC-GCACCGGCAGCGCTTCGGTGAGAAAGCGTTGCTCGATGGCGA 132826 || | ||||| || ||| || || || || || | || |||||||| | || Sbjct 264484 GTTCATCCCCAGAAGCTTGCAT-GGAAGAGCGTCTGTCAAGAACTCCTGCTCGATCGTGA 264542 Query 132827 CCGCGTCGGTGACGATTTCCCTAACGCGCGCCGCGCTCGGCCGTTGCACCAAATGCTTGA 132886 | || ||||||| ||| | || | ||| | ||||| | | || |||| || Sbjct 264543 CGGCCTCGGTGATGATGCTCTGCACAAGGGCCTGGTTCGGCTTGTTCTTCAGATGCGAGA 264602 Query 132887 ACATCAAGCAAGCAAAGTCGCAATGCAAGCCCTCGTCCCTGGAAATGAGTTCGTTGCTGA 132946 ||| | ||| || ||||| |||| |||||| || | ||| ||||| ||||| || Sbjct 264603 ACAGAAGGCAGGCGAAGTCTGTGTGCATGCCCTCATCACGGGAGATGAGCTCGTTCGAGA 264662 Query 132947 AAGTCAAGCCGGGCATGAGGCCGCGTTTTTTGAGCCAAAATATGGCGGCGAAACTGCCCG 133006 | || | |||| |||||| || ||||| || ||||| || || || || ||| || | Sbjct 264663 ATGTGAGCCCGGCCATGAGACCACGTTTCTTCAGCCAGAAGATAGCAGCAAAAGATCCAG 264722 Query 133007 AAAAGAAGACGCCCTCGACGGCCGCGAAAGCCACCAGGCGCTCGCCGAACGTGGCTTCTT 133066 | ||||||| ||||| ||||| || || || | || || | |||| || | | | Sbjct 264723 AGAAGAAGATACCCTCAACGGCGGCAAATGCAATGAGACGGAGGGCGAATGTCGAGTTCT 264782 Query 133067 TGCTGGCGATCCAGCGCAGCGCCCATTCGGCCTTTTCTTTGACGCACGGCATCGTTTCGA 133126 || | ||||| |||| |||||| || ||||| || ||| || || | |||| Sbjct 264783 TGTCAGAAATCCATCGCAACGCCCAGTCAGCCTTCCTGCGGATGCATGGGATGTTGTCGA 264842 Query 133127 TGGCGTTCAACAAACGGAGTTTCTCTTCCGAGGAACGC--ACGTAGGTGTCGATGAGGGT 133184 |||| || |||| | | ||| || | || ||| | ||| || |||||||| Sbjct 264843 TGGCATTGAACAG--GTATGTTCGCTGCTTTGGCTCGCTGATGTATGTATCGATGAGAAG 264900 Query 133185 CGAATACATTTCCGAGTGTACGTTCTCCATGGCGATTTGAAAGCCGTAAAAGCACCGCGC 133244 ||||| | || ||||| | ||||||||| ||| || |||||||| ||||| || || Sbjct 264901 GGAATATGTCTCGGAGTGGATGTTCTCCATCATGATCTGGAAGCCGTAGAAGCATCGTGC 264960 Query 133245 CTCGACCACCTGCACTTCTTGAGC-GAAACGCTCGACCAGATTTTCGTTGACGATGCCGT 133303 ||| | |||||| || |||| ||| |||||||| || || |||||||| ||||| | Sbjct 264961 CTCCGGGATCTGCACCTCA-GAGCTGAAGCGCTCGACGAGGTTCTCGTTGACAATGCCAT 265019 Query 133304 CGCTGGCGGCGAAAAAGGCCAGCACGTGCTTGATGAAATGGCGCTCGTTGTCGTTCAAGC 133363 || |||||||| || || || ||||| |||||| || |||| |||||| | | Sbjct 265020 CGGATGCGGCGAAGAATGCGAGGACGTGTGAGATGAAGAATCGTTCGTCGTCGTTGAGTC 265079 Query 133364 GCTC---CCAGTCGCGCGTGTCCTTGGACAGGTCCACCTCCTCGACGGTCCAAAACGACG 133420 ||| ||||||| | ||||| ||||| || | |||||| | ||||| || || | Sbjct 265080 GCTTGTTCCAGTCGTGGAGATCCTTCGACAGATCAATCTCCTCAGCTGTCCAGAATGAGG 265139 Query 133421 CCTCGGCTTTTTTGTACAT 133439 ||||||| ||||||||||| Sbjct 265140 CCTCGGCCTTTTTGTACAT 265158 >seq33 Length=763136 Score = 129 bits (142), Expect = 6e-25 Identities = 158/216 (73%), Gaps = 0/216 (0%) Strand=Plus/Plus Query 38244 ATGCAAATATTCGTAAAAACGCTCACGGGCAAAACCATCACCGTCGACGTCGAGGCCACC 38303 ||||| || ||||| || || ||||| ||||| ||||||||| |||| |||||| ||| | Sbjct 708297 ATGCAGATCTTCGTCAAGACTCTCACCGGCAAGACCATCACCCTCGAGGTCGAGTCCAGC 708356 Query 38304 GACAGCGTGCAAACGCTTAAAGAAAAAATCCTCGACAAAGAGGGAATTCCCGCCGACCAA 38363 |||| | | | | | || || |||| ||||| ||||| || || | ||||| Sbjct 708357 GACACCATCGACAATGTCAAGTCGAAGATCCAGGACAAGGAGGGTATCCCACCTGACCAG 708416 Query 38364 CAGCGGCTCATTTACGCGGGCAAACAGCTGGACGACGAGCGCACCCTCAACGACTACAAC 38423 ||||| || |||| || ||||| ||||| || || | || || || ||||||||| Sbjct 708417 CAGCGCCTGATTTTTGCAGGCAAGCAGCTCGAGGATGGTCGTACTCTGTCGGACTACAAC 708476 Query 38424 ATCCAAAAGGAAGCGACGCTGCATTTGGTGCTGCGT 38459 ||||| || ||| |||| || || |||||||| ||| Sbjct 708477 ATCCAGAAAGAATCGACTCTCCACTTGGTGCTTCGT 708512 Score = 129 bits (142), Expect = 6e-25 Identities = 168/230 (73%), Gaps = 2/230 (1%) Strand=Plus/Plus Query 38244 ATGCAAATATTCGTAAAAACGCTCACGGGCAAAACCATCACCGTCGACGTCGAGGCCACC 38303 |||||||| ||||| || || ||||| ||||| |||||||| |||| || || | || Sbjct 708525 ATGCAAATTTTCGTCAAGACACTCACCGGCAAGACCATCACACTCGAAGTGGAATCATCC 708584 Query 38304 GACAGCGTGCA-AACGCTTAAAGAAAAAATCCTCGACAAAGAGGGAATTCCCGCCGACCA 38362 |||| | | |||| | || ||| |||| ||||| ||||| || || | ||||| Sbjct 708585 GACACGATCGACAACG-TCAAGTCAAAGATCCAAGACAAGGAGGGCATCCCACCGGACCA 708643 Query 38363 ACAGCGGCTCATTTACGCGGGCAAACAGCTGGACGACGAGCGCACCCTCAACGACTACAA 38422 ||||| ||||| | ||| ||||| ||||| || |||| || || || || ||||| Sbjct 708644 GCAGCGTCTCATCTTCGCCGGCAAGCAGCTTGAGGACGGCCGGACACTTTCGGATTACAA 708703 Query 38423 CATCCAAAAGGAAGCGACGCTGCATTTGGTGCTGCGTTTGAGAGGCGGCC 38472 |||||| ||||| | || ||||| |||||||||||| | | || |||| Sbjct 708704 CATCCAGAAGGAGTCCACTCTGCACTTGGTGCTGCGTCTCCGTGGAGGCC 708753 Score = 93.3 bits (102), Expect = 4e-14 Identities = 149/208 (72%), Gaps = 6/208 (3%) Strand=Plus/Plus Query 38266 TCACGGGCAAAACCATCACCGTCGACGTCGAGGCCACCGACAGCGTGCA-AACGCTTAAA 38324 |||| ||||| ||||| ||| |||| || ||| | |||||| | | | || | | || Sbjct 708091 TCACCGGCAAGACCATTACCCTCGAGGTTGAGTCGTCCGACACCATCGACAATG--TGAA 708148 Query 38325 GAAAAA-ATCCTCGACAAAGAGGGAATTCCCGCCGACCAACAGCGGCTCATTTACGCGGG 38383 || || |||| || || || || ||||| | ||||| || || | |||| ||| || Sbjct 708149 GAGCAAGATCCAGGATAAGGAAGGCATTCCACCTGACCAGCAACGCTTGATTTTCGCAGG 708208 Query 38384 CAAACAGCTGGACGACGAGCGCACCCTCAACGACTACAACATCCAAAAGGA-AGCGACGC 38442 ||| ||||| || |||| |||||||| |||||||||||| || ||||| ||| || | Sbjct 708209 CAAGCAGCTCGAGGACGGTCGCACCCTGTCCGACTACAACATTCAGAAGGAGAGC-ACTC 708267 Query 38443 TGCATTTGGTGCTGCGTTTGAGAGGCGG 38470 | ||| | || || ||| | | ||||| Sbjct 708268 TCCATCTCGTCCTCCGTCTTCGTGGCGG 708295 >seq332 Length=871922 Score = 113 bits (124), Expect = 5e-20 Identities = 137/183 (75%), Gaps = 4/183 (2%) Strand=Plus/Plus Query 38253 TTCGTAAAAACGCTCACGGGCAAAACCATCACCGTCGACGTCGAGGCCACCGACAGCGTG 38312 |||||||| || ||||| ||||| |||||||| |||| |||||| | | ||||| | | Sbjct 250578 TTCGTAAAGACCCTCACTGGCAAGACCATCACGCTCGAGGTCGAGTCGAGCGACACCATC 250637 Query 38313 CA-AACGCTTAAAGAAAAA-ATCCTCGACAAAGAGGGAATTCCCGCCGACCAACAGCGGC 38370 | || | | |||| || |||| ||||| |||||||| || | ||||| ||||| Sbjct 250638 GACAATG--TCAAGAGCAAGATCCAGGACAAGGAGGGAATCCCACCGGACCAGCAGCGTT 250695 Query 38371 TCATTTACGCGGGCAAACAGCTGGACGACGAGCGCACCCTCAACGACTACAACATCCAAA 38430 | || | ||| || || ||| |||| || | ||||||||| ||||||||||||||| | Sbjct 250696 TGATCTTCGCTGGAAAGCAGTTGGAGGATGGTCGCACCCTCTCCGACTACAACATCCAGA 250755 Query 38431 AGG 38433 ||| Sbjct 250756 AGG 250758 >seq54 Length=751958 Score = 84.2 bits (92), Expect = 2e-11 Identities = 101/135 (75%), Gaps = 2/135 (1%) Strand=Plus/Plus Query 38337 GACAAAGAGGGAATTCCCGCCGACCAACAGCGGCTCATTTACGCGGGCAAACAGCTGGAC 38396 ||||| ||||||||||| | ||||| ||||| | || | ||| ||||| ||||| || Sbjct 4623 GACAAGGAGGGAATTCCACCGGACCAGCAGCGCTTGATCTTCGCCGGCAAGCAGCTCGAG 4682 Query 38397 GACGAGCGCACCCTCAACGACTACAACATCCAAAAGGA-AGCGACGCTGCATTTGGTGCT 38455 || | ||||||||| |||||||||||| || ||||| ||| || || || | || || Sbjct 4683 GATGGCCGCACCCTCTCCGACTACAACATTCAGAAGGAGAGC-ACCCTCCACCTCGTCCT 4741 Query 38456 GCGTTTGAGAGGCGG 38470 ||| || | || || Sbjct 4742 CCGTCTGCGTGGTGG 4756 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 500170655509120