Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Dothistroma_20septosporum_20[genbank_20GCA_5F002236485.1_202017-07-
28] 343 sequences; 30,616,651 total letters
Query= NC_020852.1
Length=186468
Score E
Sequences producing significant alignments: (Bits) Value
seq87 214 2e-50
seq198 89.7 6e-13
>seq87
Length=565143
Score = 214 bits (236), Expect = 2e-50
Identities = 890/1385 (64%), Gaps = 31/1385 (2%)
Strand=Plus/Plus
Query 75221 ATGTTCATGCGGGTCGCAATCGGCATCCACGGGGAAGACATTGATTCTGTCTTGGAGACA 75280
||| ||||||| || || ||||||| || |||||||||||||| | | | ||||||
Sbjct 64137 ATGATCATGCGTGTGGCTGTCGGCATTCATGGGGAAGACATTGAAGCAGCGATTGAGACA 64196
Query 75281 TACGACAAGATGTCCCA-AGGTATGTTCATTCACGCAACACCAACCCTCTTCAATGCTGG 75339
||| || | ||||| | ||| |||| || || | ||||| || |||| ||||||
Sbjct 64197 TACAACTACATGTCGTTGAAGTAC-TTCACACATGCTTCGCCAACACTTTTCAGTGCTGG 64255
Query 75340 TACACCAAGACCGCAGATGTCCAGTTGCTTCCTTATCGCCAACAAGGAGGACTCAATCAA 75399
||| ||| ||||| | | |||||| | | |||| ||||| ||| || |
Sbjct 64256 TACCCCACAGGCGCAGCTAGCATCCTGCTTCTTGGTGGCCATGAAGGATGACAGCATTGA 64315
Query 75400 CGGTATCTATGGAACTCTTACGGAGTGTGCGCAAATCTCAAAGTGGGCTGGGGGTATTGG 75459
|||||||| | || || | | ||||| ||||| ||| ||||| ||||||||
Sbjct 64316 TGGTATCTACGATACCCTCAAGATATGTGCCATGATCTCCAAGAACGCTGGCGGTATTGG 64375
Query 75460 GATGCACATCCATGATGTGAGAGCCAATAAATCTCGTA--TTCGGGGGACAAATGGTCAA 75517
| || | || | | || |||| | ||| || || | || ||||| || |
Sbjct 64376 TCTTCATGTTCACAACATCAGGGCCAC--AGGCTCATACATTGGCGGCACAAACGGCACA 64433
Query 75518 TCAGATGGTATTATTCCAATGCTTCGCGTATTTAACGCCACAGCGCGCTATGTAAATCAA 75577
|| | ||| || | |||||||| || || | |||| ||| || || || || | ||
Sbjct 64434 TCCAACGGTCTTGTACCAATGCTACGAGTCTATAACAACACTGCTCGTTACGTTGACCAG 64493
Query 75578 GCGGG------GCGTCGCAAGGGGTCCATCGCGGTCTACTTGGAACCATGGCATGCCGAT 75631
| || ||||| ||| | | | || ||||| | || || |||||||| ||
Sbjct 64494 GGTGGCAACAAGCGTCC--AGGTG-CTTTTGCCATCTACCTTGAGCCGTGGCATGCAGAC 64550
Query 75632 ATCATGGAGTTCCTTGAGTTACGACTCAACCAAGGTGACGAAGAGGCTCGGTGTAGAGAT 75691
||||| ||||| | || | || ||||| || | ||||| | ||| | |||
Sbjct 64551 GTCATGCAGTTCATGGACCTTCGCAAGAACCATGGAAAGGAAGAAGTTCGTGCGCGCGAT 64610
Query 75692 CTCTTTTCATCCCTGTGGATTCCAGACCTTTTCATGAAGCGGGTTGAGGAGGGTGGTCAA 75751
| || | | || |||||||| || || || ||| |||| || || || ||
Sbjct 64611 TTGTTCTACGCTCTCTGGATTCCCGATCTCTTTATGCAGCGTGTCGAACAGAACGGCACT 64670
Query 75752 TGGTCTCTTTTCTGTCCAGAC-AAGGCACCAGGTCTCTCCGACGCGGTGGGTGAGGAGTT 75810
||| |||| | || || || || || || ||||| || || | ||||| |||||
Sbjct 64671 TGGACTCTGATGTGCCCCAACGAATGC-CCTGGTCTGTCGGATGTTTACGGTGACGAGTT 64729
Query 75811 TGAAGCCCTCTACACAAAGTATGA-AGAGGAGGGTAGAGCCAATGCGACTGTACCAGCCG 75869
| | || ||| ||||| |||| ||| || ||| || ||| || | ||
Sbjct 64730 CAAGGAGCTGTACGAGCGTTATGAGAGAGAAGGCAAGGGCCG-TGAGACGGTTCGTGCTC 64788
Query 75870 CCGATGTTTGGAAGGCTATTCTCAAATCACAGACGGAGACTGGAACACCATATATGCTTT 75929
| | ||| | ||||||||| | | ||||| ||||| || ||||| | || || |
Sbjct 64789 AGAAAATATGGTATGCTATTCTCGAGGCGCAGACCGAGACCGGCACACCTTTCATTCTGT 64848
Query 75930 ACAAGGATGCTTGTAACAAGAAGAGTAACCAAAAGAATTTGGGAACAATCAAGAGCTCAA 75989
||||||| || ||| ||||| || || |||||| | || || ||||||||||| |
Sbjct 64849 ACAAGGACGCCGCCAACCGCAAGAGCAATCAGAAGAATCTTGGCACCATCAAGAGCTCTA 64908
Query 75990 ATCTTTGCACGGAAATTTTAGAGTACACAGATAAGGATGAGACGGCTGTTTGCAATTTGG 76049
|| | ||||| || || | |||||| | | | |||||| ||||| |||||| |||
Sbjct 64909 ATTTGTGCACTGAGATCATGGAGTACTCTGCTCCAGATGAGGTCGCTGTCTGCAATCTGG 64968
Query 76050 CATCAATCGCCCTTCCAAAGTATGTCAATGAAGAGACTCGCACTTTTGATTATGAAAAAC 76109
| || | || || || | || ||| | |||| |||||| | | ||||
Sbjct 64969 CTTCGCTTGCTCTGCCCACCTACGTCGACATCGAGAACGAGGTTTTTGACTTCAAGAAAC 65028
Query 76110 TTCATGAAATCACAAAGATTGTTACCAAAAATCTAAACCGAGTCATTGACAGAAATTTTT 76169
|||| || |||| || | || || || || ||| ||| || | || | |
Sbjct 65029 TTCACGAGGTCACCAAAGTGGTCACACGTAACCTGAACAAGACCATCGAGATCAACTACT 65088
Query 76170 ATCCCGT-TGAGACTGCGCGAAAGTCTAATATGCGACACAGACCTATTGGTTTGGGTGTT 76228
| || || ||| || |||||| || | || ||| |||| |||||| | |||||
Sbjct 65089 ACCCAGTACCAGA-GGCACGAAAGAGCAACTTCCGCCACCGACCCATTGGTCTTGGTGTC 65147
Query 76229 CAAGGTCTCGCGGATGTATTTATTTTGTGCCGCTACGCATTTGATTCAGATGAAGCCAAG 76288
| ||||| || |||| || | |||| |||| || || ||| ||||||
Sbjct 65148 AACGGTCTTGCTGATGCCTTCTTGGCTCTCCGCATGCCATTCGACTCGCCTGAGGCCAAG 65207
Query 76289 GAGATGAATGCTCGTATCTTTGAAACCATGTATCACGCATCCCTGGAGGCGAGTTGTGAA 76348
||| | ||| | || ||||| ||||| ||||| || | || ||||| || ||
Sbjct 65208 GAGCTTAATATCCAGATTTTTGAGACCATCTATCATGCTGCTCTTGAGGCTTCATGCGAG 65267
Query 76349 TTGGCT--GAAGCCCAAGGTTCCTATGAGACATTTGAGGGTTCTCCCGCGTCCCAAGGGG 76406
| ||| ||||| | ||| | || ||||||| || ||||| | || || || |
Sbjct 65268 CTTGCTGAGAAGCTC--GGTCCTTACGAGACATACCCAGGCTCTCCAGTATCGCAGGGCG 65325
Query 76407 TGCTTCAGTTTGATATGTGGG--AAG-GTGAAACCAAGCTCAACTACGACTGGGATGTTC 76463
||| |||| || ||||||| ||| | ||| | || || ||||||| | |
Sbjct 65326 AGCTCCAGTACGACATGTGGGGCAAGACTCCTACCGACCT---CTGGGACTGGGCCGCAC 65382
Query 76464 TCAAGGAACGCATCAAGGAGAAGGGTCTTCGTAACAGTCTTTTGATGGCACCAATGCCAA 76523
|||||| ||| || | ||| | || ||| ||| | | || || |||||||
Sbjct 65383 TCAAGGGCAAGATCGCCCAGCACGGTGTGCGCAACTCGCTTCTCGTTGCGCCGATGCCAA 65442
Query 76524 CAGCCTCCACCGCACAAATCTTGGGTAATAATGAATGCTTTGAACCATACACAACAAACA 76583
||||||| ||| | || ||| |||| ||| || ||||| || |||||||||| ||||
Sbjct 65443 CAGCCTCGACCTCGCAGATCATGGGCTTTAACGAGTGCTTCGAGCCATACACAAGCAACA 65502
Query 76584 TCTAC 76588
| |||
Sbjct 65503 TTTAC 65507
>seq198
Length=423218
Score = 89.7 bits (98), Expect = 6e-13
Identities = 326/503 (65%), Gaps = 22/503 (4%)
Strand=Plus/Minus
Query 65025 GAAGGCGAAATGGGCAATGAAATGG-TTTGACACAAAGTCTCGCTCCTTCGCCGAGCGCC 65083
|||||| | ||||| || |||| ||| |||| |||| | |||||| || |
Sbjct 264817 GAAGGCTGACTGGGCGTTGCGATGGATTTCTGACAAGAACTCGA-CATTCGCCCTCCGTC 264759
Query 65084 TTTTTGCGTTTGCGTGTGTGGAGGGTATCTTCTTCTCCGGGTCATTCTGC-GCTATTTAT 65142
| |||| ||||| || ||||||||||||||||| || || || ||| ||||| |
Sbjct 264758 TCATTGCATTTGCCGCCGTTGAGGGTATCTTCTTCTCTGGATC-TTTTGCTGCTATCTTC 264700
Query 65143 TGGTTGAAGAAGCGGGGTCTCATGCCAGGCCTATGCTTCTCAAATGAACTTATTTCCCGA 65202
||| ||||||| || ||||||||| | || || ||||| || || || || |||||
Sbjct 264699 TGGCTGAAGAAACGTGGTCTCATGGCCGGGCTCACATTCTCGAACGAGCTCATCTCCCGT 264640
Query 65203 GATGAGGGTCTCCACCAGGAGTTTGCCGTGGAGCTCTTCAAGACTTTGCGTAATAGACCC 65262
|||||||| | ||| || || ||| || ||| | | || || | ||
Sbjct 264639 GATGAGGGCATGCACACAGACTTCGCCTGCCTTCTGTTCTCGCATCTGAAGAACAAGCCG 264580
Query 65263 ACTACC--GAAACTATCCACGCCATCGTGAAAGAGGCGGTTGAGATTGAGAAAGGGTTCA 65320
| ||| | | | || |||| | | ||||| || ||| ||| | | ||||
Sbjct 264579 A--ACCAGGCCCTTGTGCAGAGCATCATCACCGAGGCCGTCACGATCGAGCAGGAGTTCT 264522
Query 65321 TCTTGGACGCACTCCCATGTAATCTCATCGGTATGAACTCTGAGAAGATGTCCGAGTACA 65380
| ||||| || ||||| || || | || |||||| ||| ||||| | ||||
Sbjct 264521 TGACAGACGCTCTTCCATGCAAGCTTCTGGGGATGAACGCTGGCCTCATGTCACAATACA 264462
Query 65381 TTGAGTATGTGTCGGATCGTCTCCTCAAACAAGTTGG--GGTGCCACCCA-----TTTGG 65433
|||| | || | ||||| || || ||||| | || | | | |
Sbjct 264461 TTGAATTCGTCGCCGATCGCCTACT-------GTTGGCACTCGGCAACAAGAAGTTCTAC 264409
Query 65434 AACGCGAAGAATCCATTTGACTTTATGGAAAACATTAGCCTTGATGGGAAGACCAACTTC 65493
||||| | || || || ||||| ||||| |||||| || | || ||||||||||||
Sbjct 264408 AACGCCACCAACCCCTTCGACTTCATGGAGAACATTTCGCTGGGCGGCAAGACCAACTTC 264349
Query 65494 TTTGAGAAGCGAGTTGGGGACTA 65516
|| |||||||| ||||| || ||
Sbjct 264348 TTCGAGAAGCGTGTTGGCGAGTA 264326
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 596567042207840
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |