Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Dothistroma_20septosporum_20[genbank_20GCA_5F002236485.1_202017-07- 28] 343 sequences; 30,616,651 total letters Query= NC_020864.1 Length=205622 Score E Sequences producing significant alignments: (Bits) Value seq143 224 1e-53 seq33 152 7e-32 seq110 147 3e-30 seq209 91.5 2e-13 >seq143 Length=466202 Score = 224 bits (248), Expect = 1e-53 Identities = 470/698 (67%), Gaps = 3/698 (0%) Strand=Plus/Plus Query 195290 ATGTCTCAAGCTATTGGTATCGATTTAGGAACTACTTACTCATGTGTTGGTGTATGGCAA 195349 ||| | | ||| || |||||||| || || || || ||||| || || ||| | | | Sbjct 395943 ATGGCACCAGCAATCGGTATCGACTTGGGTACCACGTACTCCTGCGTGGGTATCTTCAGA 396002 Query 195350 AATGATCGTGTAGAGATTATCCCGAATGACCAAGGAAACCGTACAACTCCATCGTACGTT 195409 ||||||| | ||||| ||| | || || || || ||||| ||||| || || | ||| Sbjct 396003 GATGATCGCATCGAGATCATCGCCAACGATCAGGGCAACCGCACAACACCCTCATTCGTC 396062 Query 195410 GCCTTTACAGATAATGAACGTCTCGTTGGAGATGCCGCAAAAAATCAGACAGCTATGAAC 195469 ||||| ||||| | || ||||| | || ||||| || || || ||| || |||||| Sbjct 396063 GCCTTCACAGACACCGAGCGTCTAATCGGTGATGCTGCCAAGAACCAGGTCGCCATGAAC 396122 Query 195470 CCTATCAATACTGTCTTTGACGCGAAGCGTCTTATTGGTCGCAAGTTTTCGGATAAGAAA 195529 || || || ||||| ||||| ||||| | || || |||||||| || | Sbjct 396123 CCAGCAAACACAGTCTTCGACGCAAAGCGATTGATCGGCCGCAAGTTCCAAGACGCAGAG 396182 Query 195530 GTCCAAGACGATATAAAGGACTGGTCTTATGAAGTTGTTCCCGGTGTGGCTGATAAGCCT 195589 || |||| ||||| ||| ||| | | | ||| | || | | || | ||||| Sbjct 396183 GTGCAAGCAGATATGAAGCACTTTCCCT-TCAAGGTCATCGAGAAG--GCCGGCAAGCCA 396239 Query 195590 ATGATTAATGTTGAATTTCACGGTGAGAAGAAACAATTTGCTCCCGAAGAAATTTCGTCT 195649 | || || || || | || ||| |||| || || | || || || || || | Sbjct 396240 GTCATCTCGGTCGAGTTCAAGGGCGAGGAGAAGCAGTTCACACCAGAGGAGATCTCCGCC 396299 Query 195650 ATGGTGTTGATTAAGATGAAGGAGACTGCGGAATCTTTCATGGGTAAAACTGTGAAAGAT 195709 ||| | | | |||||| ||||| || || || | | | ||| || || || | Sbjct 396300 ATGATTCTCACAAAGATGCGTGAGACCGCAGAGTCGTACCTTGGTGGCACCGTCAACAAC 396359 Query 195710 GCAGTTGTGACTGTACCTGCTTACTTCAGTGATTCACAACGACAGGCGACAAAGGACGCT 195769 || || || || || || || || |||| || || || ||||| || || |||||||| Sbjct 396360 GCCGTCGTCACGGTTCCAGCATATTTCAACGACTCGCAGCGACAAGCAACCAAGGACGCC 396419 Query 195770 GCTGCTATTGCGGGTCTAAACTGTCTTAGAATTATCAATGAACCAACAGCGGCTGCAATT 195829 | ||||| || || ||| || | || ||||| || || || || || || ||| Sbjct 396420 GGCCTCATTGCTGGCCTCAACGTCCTCCGTATCATCAACGAGCCGACTGCAGCAGCCATT 396479 Query 195830 GCTTATGGTCTGGACAAGAACAAGGACGAAGATAAAAATGTATTGATCTTTGATCTCGGT 195889 || || ||||| |||||||| | || | || ||||| | ||||| ||||| ||| Sbjct 396480 GCCTACGGTCTCGACAAGAAGACTGAGGGCGAGCGCAATGTGCTCATCTTCGATCTTGGT 396539 Query 195890 GGTGGTACGTTTGATGTCTCACTTCTCAATATTGAAGGTGGTATATTCGAAGTAAAGGCT 195949 |||||||| || ||||| || || |||| ||||| | ||||| ||||| || ||| | Sbjct 396540 GGTGGTACCTTCGATGTATCGCTGCTCACAATTGAGGAGGGTATTTTCGAGGTCAAGTCC 396599 Query 195950 ACTGCTGGTGATACTCATCTAGGTGGTGAAGATTTCGA 195987 ||||| ||||| ||||| | |||||||| || ||||| Sbjct 396600 ACTGCCGGTGACACTCACTTGGGTGGTGAGGACTTCGA 396637 >seq33 Length=763136 Score = 152 bits (168), Expect = 7e-32 Identities = 156/204 (76%), Gaps = 0/204 (0%) Strand=Plus/Plus Query 171886 ACTGGAAAAACTATCACCCTCGAGGTTGAGTCGTCAGACACAATCGATAACATCAAAGCC 171945 || || || || || |||||||||||||||||||| ||||| ||||| || | || | Sbjct 708093 ACCGGCAAGACCATTACCCTCGAGGTTGAGTCGTCCGACACCATCGACAATGTGAAGAGC 708152 Query 171946 AAGATTCAAGATAAGGAAGGCATTCCACCCGATCAGCAACGACTTATTTTTGCTGGTAAA 172005 ||||| || |||||||||||||||||||| || |||||||| | ||||| || || || Sbjct 708153 AAGATCCAGGATAAGGAAGGCATTCCACCTGACCAGCAACGCTTGATTTTCGCAGGCAAG 708212 Query 172006 CAGCTTGAAGATGGACGTACCCTCGCTGATTACAACGTTCAAAAGGAGTCTACTCTACAC 172065 ||||| || || || || ||||| | || |||||| |||| |||||| ||||| || Sbjct 708213 CAGCTCGAGGACGGTCGCACCCTGTCCGACTACAACATTCAGAAGGAGAGCACTCTCCAT 708272 Query 172066 CTTGTTCTAAGGCTTCGGGGTGGT 172089 || || || | ||||| || ||| Sbjct 708273 CTCGTCCTCCGTCTTCGTGGCGGT 708296 Score = 149 bits (164), Expect = 8e-31 Identities = 171/230 (74%), Gaps = 0/230 (0%) Strand=Plus/Plus Query 171860 GTATGCAAATCTTTGTGAAAACCCTTACTGGAAAAACTATCACCCTCGAGGTTGAGTCGT 171919 ||||||| ||||| || || || || || || || || |||||||||||||| ||||| Sbjct 708295 GTATGCAGATCTTCGTCAAGACTCTCACCGGCAAGACCATCACCCTCGAGGTCGAGTCCA 708354 Query 171920 CAGACACAATCGATAACATCAAAGCCAAGATTCAAGATAAGGAAGGCATTCCACCCGATC 171979 ||||| ||||| || |||| | ||||| || || ||||| || || ||||| || | Sbjct 708355 GCGACACCATCGACAATGTCAAGTCGAAGATCCAGGACAAGGAGGGTATCCCACCTGACC 708414 Query 171980 AGCAACGACTTATTTTTGCTGGTAAACAGCTTGAAGATGGACGTACCCTCGCTGATTACA 172039 |||| || || |||||||| || || ||||| || ||||| ||||| || | || |||| Sbjct 708415 AGCAGCGCCTGATTTTTGCAGGCAAGCAGCTCGAGGATGGTCGTACTCTGTCGGACTACA 708474 Query 172040 ACGTTCAAAAGGAGTCTACTCTACACCTTGTTCTAAGGCTTCGGGGTGGT 172089 || | || || || || ||||| ||| | || || | || || |||||| Sbjct 708475 ACATCCAGAAAGAATCGACTCTCCACTTGGTGCTTCGTCTCCGTGGTGGT 708524 >seq110 Length=1545425 Score = 147 bits (162), Expect = 3e-30 Identities = 196/272 (72%), Gaps = 3/272 (1%) Strand=Plus/Plus Query 195719 ACTGTACCTGCTTACTTCAGTGATTCACAACGACAGGCGACAAAGGACGCTGCTGCTATT 195778 || || || |||||||||| ||| || |||| || || |||||||||| ||| || Sbjct 791435 ACCGTCCCAGCTTACTTCAACGATAACCAGAGACAAGCCACCAAGGACGCTGGTGCCATC 791494 Query 195779 GCGGGTCTAAACTGTCTTAGAATTATCAATGAACCAACAGCGGCTGCAATTGCTTATGGT 195838 || || || ||| ||| | || ||||| || ||||| || ||||| || || |||||| Sbjct 791495 GCCGGACTCAACGTTCTCCGCATCATCAACGAGCCAACTGCCGCTGCTATCGCATATGGT 791554 Query 195839 CTGGACAAGAACAAG---GACGAAGATAAAAATGTATTGATCTTTGATCTCGGTGGTGGT 195895 || | | |||| ||| | || ||| || | |||| ||||| ||||||||| Sbjct 791555 CTCGGCTCCGGCAAGTCTGACAAGGAGCGAAACGTCCTCATCTACGATCTTGGTGGTGGT 791614 Query 195896 ACGTTTGATGTCTCACTTCTCAATATTGAAGGTGGTATATTCGAAGTAAAGGCTACTGCT 195955 || || |||||||| ||||| | ||| | || ||| | ||| || |||||||| ||| Sbjct 791615 ACTTTCGATGTCTCCCTTCTTCACATTCAGGGCGGTGTCTTCACTGTCAAGGCTACCGCT 791674 Query 195956 GGTGATACTCATCTAGGTGGTGAAGATTTCGA 195987 ||||| || ||| | |||||| | |||||||| Sbjct 791675 GGTGACACCCATTTGGGTGGTCAGGATTTCGA 791706 Score = 102 bits (112), Expect = 1e-16 Identities = 250/375 (67%), Gaps = 8/375 (2%) Strand=Plus/Plus Query 196061 GCTCTTCGTCGGCTTAGGACTGCATGTGAACGTGCCAAACGAACTCTCTCTTCTACGG-- 196118 ||||| ||||| || | || || || || |||||||| |||||||| || | |||| Sbjct 791886 GCTCTCCGTCGCCTACGAACCGCTTGCGAGCGTGCCAAGCGAACTCTTTC--CAACGGAA 791943 Query 196119 CTCAAACAATGGTTGAGATTGATTCGTTGTTTGACGGAATTGACTTCTATACAACTATTA 196178 ||||||| | | || || ||||| | || || || || ||| | || | || | Sbjct 791944 CTCAAACCACAATCGAAATCGATTCTCTCTTCGATGGCGAGGATTTCAACACCAACATCA 792003 Query 196179 CCCGTGCACGTTTTGAAGAGTTAAACTCTGATTTGTTTA--GGAAGTGTATGGAACCTGT 196236 ||||||| ||||| || || | ||| | | || | || | || | || || Sbjct 792004 CCCGTGCCCGTTTCGAGGACATTAACGCCAAGGCTTTCAACGGCACC--ATCCAGCCAGT 792061 Query 196237 TGAACAAGTACTTCGTGACGCAAAGATGGATAAGTCTAAGGTTGATGAAATTGTCCTTGT 196296 || || || || |||||| || || ||| |||||||| || || || ||||| Sbjct 792062 CGAGCAGGTGCTCAAGGACGCATCAATCGAAAAGAGCAAGGTTGACGAGATCGTGCTTGT 792121 Query 196297 GGGAGGATCAACCCGTATTCCGAAGATTCAACAGATGCTTTCTAGCTTCTTCAATAATAA 196356 || || || || |||||||| ||||| || || | || || ||||||||| || Sbjct 792122 CGGTGGTTCTACTCGTATTCCAAAGATCCAGAAGCTCCTGTCCGACTTCTTCAACGGCAA 792181 Query 196357 AGATTTAAACAAAACGATCAACCCGGATGAAGCAGTTGCTTATGGTGCGGCCGTTCAGGC 196416 | | | || | |||||||| ||||| || || || || || || ||||||||||| Sbjct 792182 GAAGCTCGAGAAGAGCATCAACCCCGATGAGGCTGTCGCATACGGGGCCGCCGTTCAGGC 792241 Query 196417 TGCTATTCTCTCAGG 196431 | ||| ||||| || Sbjct 792242 CGGTATCCTCTCTGG 792256 >seq209 Length=405951 Score = 91.5 bits (100), Expect = 2e-13 Identities = 221/331 (67%), Gaps = 13/331 (4%) Strand=Plus/Minus Query 195662 AAGATGAAGGAGACTGCGGAATCTTTCATGGGTAAAACTGTGAAAGATGCAGTTGTGACT 195721 ||||||||||| || || || | | | || ||| || | | ||||| || || Sbjct 144674 AAGATGAAGGAAGTCGCCGAGTCATACCTCGGCGAAAAGGTCACCAACGCAGTCGTCACA 144615 Query 195722 GTACCTGCTTACTTCAGTGATTCACAACGACAGGCGACAAAGGACGCTGCTGCTATTGCG 195781 || || || ||||||| || | || || || || |||||||||| | || || Sbjct 144614 GTCCCAGCCTACTTCAACGACGCCCAGCGTGCCGCTACCAAGGACGCTGGCACGATCGCC 144555 Query 195782 GGTCTAAACTGTCTTAGAATTATCAATGAACCAACAGCGGCTGCAATTGCTTATGGTCTG 195841 ||||| ||| || | | |||| ||||| || || || || | || || || || Sbjct 144554 GGTCTCAACGTCCTCCGTGTCGTCAACGAACCTACCGCCGCCGCTCTCGCCTACGGCCTC 144495 Query 195842 GACAAGA---ACAAGGA-CGA-AGATAAAAATGTATTGATCTTTGATCTCGGTGGTGGTA 195896 ||||||| ||||||| || |||| | ||| ||| || ||||||||||||| Sbjct 144494 GACAAGACCGACAAGGAACGCCAGATCA-------TTG-TCTACGACCTCGGTGGTGGTA 144443 Query 195897 CGTTTGATGTCTCACTTCTCAATATTGAAGGTGGTATATTCGAAGTAAAGGCTACTGCTG 195956 | || |||||||| | | | | | || ||| | ||||| || |||| || || | Sbjct 144442 CTTTCGATGTCTCCATCTTGACTGTCGACCAGGGTGTGTTCGAGGTTCAGGCAACGGCCG 144383 Query 195957 GTGATACTCATCTAGGTGGTGAAGATTTCGA 195987 |||| || ||||| |||||||| || ||||| Sbjct 144382 GTGACACCCATCTTGGTGGTGAGGACTTCGA 144352 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 657859579414960