Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Dothistroma_20septosporum_20[genbank_20GCA_5F002236485.1_202017-07-
28] 343 sequences; 30,616,651 total letters
Query= NC_021923.1
Length=140633
Score E
Sequences producing significant alignments: (Bits) Value
seq87 125 6e-24
seq33 122 8e-23
seq332 82.4 7e-11
>seq87
Length=565143
Score = 125 bits (138), Expect = 6e-24
Identities = 1027/1635 (63%), Gaps = 74/1635 (5%)
Strand=Plus/Minus
Query 138415 TGAATGCTCCCGTTGGCCGCAATGATGCGATTTCTCATGTCATCGTTGTACAGATTCAAC 138474
|||||| || ||| | ||||||||||| || |||||| || || |||| | ||
Sbjct 65632 TGAATGGAGCCATTGTCAGCAATGATGCGGTTCTTCATGT--TCTCTGACCAGAGGCCAC 65575
Query 138475 --TTGATCAAGTCGTTTATCAGATATCTGTTTATGACCTGAAATTCACCGGCCAATACTC 138532
| || | || || | || || ||| | |||||| || || || ||||| || |
Sbjct 65574 GGTCGACGAGATCCTTCAGAAGCCATGGGTTGACGACCTGGAACTCGCCAGCCAACACAC 65515
Query 138533 GACGAACGTAAATGTTGTTGGTGAAAGGCTCAAACGATTCGTTGTTTCCCAGAATCTGAG 138592
||||| |||||||||| | ||| | ||||| || | ||||| |||| ||||| |
Sbjct 65514 GACGAGAGTAAATGTTGCTTGTGTATGGCTCGAAGCACTCGTTAAAGCCCATGATCTGCG 65455
Query 138593 CCGTGGTCGCGGTCGGCATGTACGCCACCAAAAGAGAATTCCGTAAACCGTGAAGCTTGA 138652
|| | || || ||||| ||| || | ||| || || || | |||||| | ||
Sbjct 65454 AGGTCGAGGCTGTTGGCATCGGCGCAACGAGAAGCGAGTTGCGCACACCGTGCTGGGCGA 65395
Query 138653 TTCGTTCCTTGAGCGACGACCAGTCCCACAAATCGCTAGGTTTTTTGTTCCACATATCGT 138712
| ||||||| | | ||||||||| | ||| |||| | ||| |||||| ||||
Sbjct 65394 TCTTGCCCTTGAGTGCGGCCCAGTCCCAGAGGTCGGTAGGAGTCTTGCCCCACATGTCGT 65335
Query 138713 ACTGTAACATTCCCAAACTTGCGGGACTGCCTTCGTACGAATCGTATACACCAAACTCTT 138772
|||| | | ||| | | ||| |||| ||| | ||||| ||| | || |
Sbjct 65334 ACTGGAGCTCGCCCTGCGATACTGGAGAGCCTGGGTATGTCTCGTAAGGACCGAGCTTCT 65275
Query 138773 GCGCCAACTCGTTGCTCGCCTCGAGCGCACCATAGTAAATAGTTTCGGCAATCTGCTGAT 138832
|| | |||| ||||| || ||| ||| || || || || |||||| ||
Sbjct 65274 CAGCAAGCTCGCATGAAGCCTCAAGAGCAGCATGATAGATGGTCTCAAAAATCTGGATAT 65215
Query 138833 TGAGCAATCGGGCCTC-GGCGCTCTCGTACGGCATGCGGAGCATCGTGAACGCGTCGGCC 138891
| ||| |||||| |||| ||| | ||||||||||| | ||| || || ||
Sbjct 65214 TAAGCTCCTTGGCCTCAGGCG-AGTCGAATGGCATGCGGAGAGCCAAGAAGGCATCAGCA 65156
Query 138892 AGCCCTTGCACGCCCACTCCGACAGGGCGATGGCGCAGATTTGACGCTTTTGCGGCTTCG 138951
|| || | || || | || | || || ||||| | | ||| | |||| | | || |
Sbjct 65155 AGACCGTTGACACCAAGACCAATGGGTCGGTGGCGGA-AGTTG-CTCTTTCGTGCCTCTG 65098
Query 138952 ATA--GGATAATAGTTTACATCGATGATTTTGTTTAAATTTCGCACGACCACCTTAG--- 139006
|| || || ||||| | |||||| | ||||| | || || |||||| || |
Sbjct 65097 GTACTGGGTAGTAGTTGATCTCGATGGTCTTGTTCAGGTTACGTGTGACCACTTTGGTGA 65038
Query 139007 --TCGT----ATGCTTTAATCGTTCAAAATCGTATGTGCCCCCGTTGTCGTCGACGACGT 139060
|||| | ||| || |||||| || |||| ||| | ||||||
Sbjct 65037 CCTCGTGAAGTTTCTTGAA---GTCAAAA---------ACCTCGTTCTCGATGTCGACGT 64990
Query 139061 CGACAAATTTGTTGACACA--AATCGAGGCTATGTTGCACACCGCCACTTCGTCGGGGTC 139118
| || | || | || ||| || | ||||| || || || || || || |
Sbjct 64989 AG--------GTGGGCAGAGCAAGCGAAGCCAGATTGCAGACAGCGACCTCATCTGGAGC 64938
Query 139119 GCTGTATTCGACAATTTCGGCACACAAATTACTACACTTGATCGTACCTAAATTTTGTTG 139178
||| || | || || | ||||||||| | |||||| || || | ||| | ||
Sbjct 64937 AGAGTACTCCATGATCTCAGTGCACAAATTAGAGCTCTTGATGGTGCCAAGATTCTTCTG 64878
Query 139179 ATTGCTTTTTCGGTTACAAGCATCTTTGTAAAGCATATACGGTGTGCCAGTTTCCACTTG 139238
|||||| || ||||| || || ||||| || || | |||||||| || || ||
Sbjct 64877 ATTGCTCTTGCGGTTGGCGGCGTCCTTGTACAGAATGAAAGGTGTGCCGGTCTCGGTCTG 64818
Query 139239 TGTCTCTATAAT-GAATTTGAACA-AGTCCCT-AGCTTGTATTTGACGCACGTAAAGT-T 139294
| ||| | ||| | || | || | | || ||| | | | | |||| |
Sbjct 64817 CGCCTCGAGAATAGCAT---ACCATATTTTCTGAGCACG-AACCGTCTCACGGCCCTTGC 64762
Query 139295 CGTCGCGCTCGTACTTTTCGTAGAGTTCGTCGAA-TCGTTCACCGTAGGCGTCAGAAAGA 139353
| || | ||| || ||||| || || | ||| ||| |||||||| | || || |||
Sbjct 64761 CTTCTCTCTCATAACGCTCGTACAGCTCCTTGAACTCG-TCACCGTAAACATCCGACAGA 64703
Query 139354 TCGCGACACTTGTCAGGACACATGAGCGACCATACGCCGTTCGCCTTGACGCGCCTCATG 139413
| | || | || || ||||| || | ||| ||||||| | ||| ||| |||
Sbjct 64702 CCAGGGCATTCGTTGGGGCACATCAGAGTCCAAGTGCCGTTCTGTTCGACACGCTGCATA 64643
Query 139414 AACAGATCCGGAATCCACAAAGCGAACAGCAAATCGCGCGCCTTCTTATCTTCCGAACCC 139473
|| ||||| |||||||| | |||| | | |||||||||||| |||||| ||
Sbjct 64642 AAGAGATCGGGAATCCAGAGAGCGTAGAACAAATCGCGCGCACGAACTTCTTCC-TTTCC 64584
Query 139474 ATGTTACGTTTC--ATGTTAAGGAAATCAAAAACGTCAGCGTGCCATGGTTCCAGATAGA 139531
||| | | || | | || | ||| | | ||||| || ||||| || || || ||||
Sbjct 64583 ATGGTTC-TTGCGAAGGTCCATGAACTGCATGACGTCTGCATGCCACGGCTCAAGGTAGA 64525
Query 139532 TGGCCATTGCGCCTTTCCG---TTTGCCACCTTGATCGACGTGTCGTACAGCATTATTGA 139588
|||| | || ||| || |||||||| || || |||| || ||| || ||
Sbjct 64524 TGGCAAAAGCACCTGGACGCTTGTTGCCACCCTGGTCAACGTAACGAGCAGTGTTGTTAT 64465
Query 139589 ATACGCGCAACATCGGCTCCAGACCGCTCGCTGTTCCGTTGGTG----CTACGGATGGGA 139644
| || || | ||| || | |||||| | | ||| ||||| ||| | | | ||| |
Sbjct 64464 AGACTCGTAGCATTGGTACAAGACCGTTGGATGTGCCGTTTGTGCCGCCAATGTATGAGC 64405
Query 139645 CTGTTGCGAGCTCGGACGTCATGTACATTGATGCCGATTCCGCCGCCAAATTTGGATATT 139704
|||| || | || || || |||| | || || ||||| | ||||| ||
Sbjct 64404 CTGT----GGCCCTGATGTTGTGAACATGAAGACCAATACCGCCAGCGTTCTTGGAGATC 64349
Query 139705 AAAACGCA-ATCGCGTAATGTCTCGTATATACCTCTTATGCTGTCGTCCTGCATCGTGAC 139763
| | || ||| | | || ||||| ||||| |||||||| |||| ||| | ||
Sbjct 64348 ATGGCACATATCTTG-AGGGTATCGTAGATACCATCAATGCTGTCATCCTTCATGGCCAC 64290
Query 139764 CAGAAAGCATGACGAAAGTTGCGGTAGTTTCGTGCCGGCTGCAAACAGAGTAGGACTCGC 139823
|| ||||| || | || |||| || || || || || || || || ||
Sbjct 64289 CAAGAAGCAGGATGCTAGCTGCGCCTGTGGGGTACCAGCACTGAAAAGTGTTGGCGAAGC 64230
Query 139824 GTGCGTGAACATTTGTTTCGACATCAATTCGTACGTTTCGATGGC-GCTCACAATATCCC 139882
|| ||||| | |||||| | | ||| || || || || ||| |||| ||
Sbjct 64229 ATGTGTGAAGTACTTCAACGACATGTAGTTGTATGTCTCAATCGCTGCT-TCAATGTCTT 64171
Query 139883 TTCCGTGGATACCGACAGAGACTCGCATCAGCATATGTTGGATCCGTTCGGCCACCGCGC 139942
|| || || ||||||| || ||||| | ||| ||||| | ||||| ||| ||
Sbjct 64170 CCCCATGAATGCCGACAGCCACACGCATGATCATCTGTTGCGGTCTCTCGGCAACCTTGC 64111
Query 139943 CCTCGAtttttttCAG--ATAACCGTTCTCTAGGGTCTTGTAGCCAAAGTACCTATAGTT 140000
| || ||| | || || | || ||| || |||||| |||| |||||| |||||
Sbjct 64110 CGTCAATTCTGAGAAGGTATGATCG--CTCCAGAGTCTTGAAGCCGAAGTACTGGTAGTT 64053
Query 140001 GAAATCGAGCGCATA 140015
||| ||| | ||||
Sbjct 64052 GAAGTCGCGGTCATA 64038
>seq33
Length=763136
Score = 122 bits (134), Expect = 8e-23
Identities = 166/229 (72%), Gaps = 2/229 (1%)
Strand=Plus/Plus
Query 24704 ATGCAGATCTTTATTAAAACGCTAACCGGTAAAACTATTACGCTCGAAGTAGAAGCCACC 24763
||||| || || | || || || ||||| || || || || |||||||| ||| | ||
Sbjct 708525 ATGCAAATTTTCGTCAAGACACTCACCGGCAAGACCATCACACTCGAAGTGGAATCATCC 708584
Query 24764 GACACAGTAGAAACGGTAAAACAAAAGATCCAAGACAAAGAAGGAATACCTCCCGATCAA 24823
||||| | || | || || ||||||||||||||| || || || || || || ||
Sbjct 708585 GACACGATCGACAACGTCAAGTCAAAGATCCAAGACAAGGAGGGCATCCCACCGGACCAG 708644
Query 24824 CAACGTTTGATCTTTGCCGGGAAACAGCTGGAGGA-TTCGAGAAACATGTCAGATTATAA 24882
|| ||| | ||||| ||||| || ||||| ||||| | || || | || ||||| ||
Sbjct 708645 CAGCGTCTCATCTTCGCCGGCAAGCAGCTTGAGGACGGCCGGACAC-TTTCGGATTACAA 708703
Query 24883 CATTCAAAAGGAATCGACACTACACTTGGTGTTGCGATTGCGCGGAGGC 24931
||| || ||||| || || || ||||||||| |||| | || ||||||
Sbjct 708704 CATCCAGAAGGAGTCCACTCTGCACTTGGTGCTGCGTCTCCGTGGAGGC 708752
Score = 109 bits (120), Expect = 5e-19
Identities = 150/210 (71%), Gaps = 0/210 (0%)
Strand=Plus/Plus
Query 24704 ATGCAGATCTTTATTAAAACGCTAACCGGTAAAACTATTACGCTCGAAGTAGAAGCCACC 24763
||||||||||| | || || || ||||| || || || || ||||| || || ||| |
Sbjct 708297 ATGCAGATCTTCGTCAAGACTCTCACCGGCAAGACCATCACCCTCGAGGTCGAGTCCAGC 708356
Query 24764 GACACAGTAGAAACGGTAAAACAAAAGATCCAAGACAAAGAAGGAATACCTCCCGATCAA 24823
||||| | || | || || |||||||| ||||| || || || || || || ||
Sbjct 708357 GACACCATCGACAATGTCAAGTCGAAGATCCAGGACAAGGAGGGTATCCCACCTGACCAG 708416
Query 24824 CAACGTTTGATCTTTGCCGGGAAACAGCTGGAGGATTCGAGAAACATGTCAGATTATAAC 24883
|| || |||| ||||| || || ||||| |||||| | | |||| || || |||
Sbjct 708417 CAGCGCCTGATTTTTGCAGGCAAGCAGCTCGAGGATGGTCGTACTCTGTCGGACTACAAC 708476
Query 24884 ATTCAAAAGGAATCGACACTACACTTGGTG 24913
|| || || |||||||| || |||||||||
Sbjct 708477 ATCCAGAAAGAATCGACTCTCCACTTGGTG 708506
>seq332
Length=871922
Score = 82.4 bits (90), Expect = 7e-11
Identities = 131/188 (70%), Gaps = 0/188 (0%)
Strand=Plus/Plus
Query 24706 GCAGATCTTTATTAAAACGCTAACCGGTAAAACTATTACGCTCGAAGTAGAAGCCACCGA 24765
||| | ||| | || || || || || || || || |||||||| || || | | |||
Sbjct 250571 GCACAGCTTCGTAAAGACCCTCACTGGCAAGACCATCACGCTCGAGGTCGAGTCGAGCGA 250630
Query 24766 CACAGTAGAAACGGTAAAACAAAAGATCCAAGACAAAGAAGGAATACCTCCCGATCAACA 24825
||| | || | || || |||||||| ||||| || ||||| || || || || ||
Sbjct 250631 CACCATCGACAATGTCAAGAGCAAGATCCAGGACAAGGAGGGAATCCCACCGGACCAGCA 250690
Query 24826 ACGTTTGATCTTTGCCGGGAAACAGCTGGAGGATTCGAGAAACATGTCAGATTATAACAT 24885
||||||||||| || || || ||| |||||||| | | | | || || || |||||
Sbjct 250691 GCGTTTGATCTTCGCTGGAAAGCAGTTGGAGGATGGTCGCACCCTCTCCGACTACAACAT 250750
Query 24886 TCAAAAGG 24893
|| ||||
Sbjct 250751 CCAGAAGG 250758
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 449895671064040
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |