Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Dothistroma_20septosporum_20[genbank_20GCA_5F002236485.1_202017-07- 28] 343 sequences; 30,616,651 total letters Query= NC_021923.1 Length=140633 Score E Sequences producing significant alignments: (Bits) Value seq87 125 6e-24 seq33 122 8e-23 seq332 82.4 7e-11 >seq87 Length=565143 Score = 125 bits (138), Expect = 6e-24 Identities = 1027/1635 (63%), Gaps = 74/1635 (5%) Strand=Plus/Minus Query 138415 TGAATGCTCCCGTTGGCCGCAATGATGCGATTTCTCATGTCATCGTTGTACAGATTCAAC 138474 |||||| || ||| | ||||||||||| || |||||| || || |||| | || Sbjct 65632 TGAATGGAGCCATTGTCAGCAATGATGCGGTTCTTCATGT--TCTCTGACCAGAGGCCAC 65575 Query 138475 --TTGATCAAGTCGTTTATCAGATATCTGTTTATGACCTGAAATTCACCGGCCAATACTC 138532 | || | || || | || || ||| | |||||| || || || ||||| || | Sbjct 65574 GGTCGACGAGATCCTTCAGAAGCCATGGGTTGACGACCTGGAACTCGCCAGCCAACACAC 65515 Query 138533 GACGAACGTAAATGTTGTTGGTGAAAGGCTCAAACGATTCGTTGTTTCCCAGAATCTGAG 138592 ||||| |||||||||| | ||| | ||||| || | ||||| |||| ||||| | Sbjct 65514 GACGAGAGTAAATGTTGCTTGTGTATGGCTCGAAGCACTCGTTAAAGCCCATGATCTGCG 65455 Query 138593 CCGTGGTCGCGGTCGGCATGTACGCCACCAAAAGAGAATTCCGTAAACCGTGAAGCTTGA 138652 || | || || ||||| ||| || | ||| || || || | |||||| | || Sbjct 65454 AGGTCGAGGCTGTTGGCATCGGCGCAACGAGAAGCGAGTTGCGCACACCGTGCTGGGCGA 65395 Query 138653 TTCGTTCCTTGAGCGACGACCAGTCCCACAAATCGCTAGGTTTTTTGTTCCACATATCGT 138712 | ||||||| | | ||||||||| | ||| |||| | ||| |||||| |||| Sbjct 65394 TCTTGCCCTTGAGTGCGGCCCAGTCCCAGAGGTCGGTAGGAGTCTTGCCCCACATGTCGT 65335 Query 138713 ACTGTAACATTCCCAAACTTGCGGGACTGCCTTCGTACGAATCGTATACACCAAACTCTT 138772 |||| | | ||| | | ||| |||| ||| | ||||| ||| | || | Sbjct 65334 ACTGGAGCTCGCCCTGCGATACTGGAGAGCCTGGGTATGTCTCGTAAGGACCGAGCTTCT 65275 Query 138773 GCGCCAACTCGTTGCTCGCCTCGAGCGCACCATAGTAAATAGTTTCGGCAATCTGCTGAT 138832 || | |||| ||||| || ||| ||| || || || || |||||| || Sbjct 65274 CAGCAAGCTCGCATGAAGCCTCAAGAGCAGCATGATAGATGGTCTCAAAAATCTGGATAT 65215 Query 138833 TGAGCAATCGGGCCTC-GGCGCTCTCGTACGGCATGCGGAGCATCGTGAACGCGTCGGCC 138891 | ||| |||||| |||| ||| | ||||||||||| | ||| || || || Sbjct 65214 TAAGCTCCTTGGCCTCAGGCG-AGTCGAATGGCATGCGGAGAGCCAAGAAGGCATCAGCA 65156 Query 138892 AGCCCTTGCACGCCCACTCCGACAGGGCGATGGCGCAGATTTGACGCTTTTGCGGCTTCG 138951 || || | || || | || | || || ||||| | | ||| | |||| | | || | Sbjct 65155 AGACCGTTGACACCAAGACCAATGGGTCGGTGGCGGA-AGTTG-CTCTTTCGTGCCTCTG 65098 Query 138952 ATA--GGATAATAGTTTACATCGATGATTTTGTTTAAATTTCGCACGACCACCTTAG--- 139006 || || || ||||| | |||||| | ||||| | || || |||||| || | Sbjct 65097 GTACTGGGTAGTAGTTGATCTCGATGGTCTTGTTCAGGTTACGTGTGACCACTTTGGTGA 65038 Query 139007 --TCGT----ATGCTTTAATCGTTCAAAATCGTATGTGCCCCCGTTGTCGTCGACGACGT 139060 |||| | ||| || |||||| || |||| ||| | |||||| Sbjct 65037 CCTCGTGAAGTTTCTTGAA---GTCAAAA---------ACCTCGTTCTCGATGTCGACGT 64990 Query 139061 CGACAAATTTGTTGACACA--AATCGAGGCTATGTTGCACACCGCCACTTCGTCGGGGTC 139118 | || | || | || ||| || | ||||| || || || || || || | Sbjct 64989 AG--------GTGGGCAGAGCAAGCGAAGCCAGATTGCAGACAGCGACCTCATCTGGAGC 64938 Query 139119 GCTGTATTCGACAATTTCGGCACACAAATTACTACACTTGATCGTACCTAAATTTTGTTG 139178 ||| || | || || | ||||||||| | |||||| || || | ||| | || Sbjct 64937 AGAGTACTCCATGATCTCAGTGCACAAATTAGAGCTCTTGATGGTGCCAAGATTCTTCTG 64878 Query 139179 ATTGCTTTTTCGGTTACAAGCATCTTTGTAAAGCATATACGGTGTGCCAGTTTCCACTTG 139238 |||||| || ||||| || || ||||| || || | |||||||| || || || Sbjct 64877 ATTGCTCTTGCGGTTGGCGGCGTCCTTGTACAGAATGAAAGGTGTGCCGGTCTCGGTCTG 64818 Query 139239 TGTCTCTATAAT-GAATTTGAACA-AGTCCCT-AGCTTGTATTTGACGCACGTAAAGT-T 139294 | ||| | ||| | || | || | | || ||| | | | | |||| | Sbjct 64817 CGCCTCGAGAATAGCAT---ACCATATTTTCTGAGCACG-AACCGTCTCACGGCCCTTGC 64762 Query 139295 CGTCGCGCTCGTACTTTTCGTAGAGTTCGTCGAA-TCGTTCACCGTAGGCGTCAGAAAGA 139353 | || | ||| || ||||| || || | ||| ||| |||||||| | || || ||| Sbjct 64761 CTTCTCTCTCATAACGCTCGTACAGCTCCTTGAACTCG-TCACCGTAAACATCCGACAGA 64703 Query 139354 TCGCGACACTTGTCAGGACACATGAGCGACCATACGCCGTTCGCCTTGACGCGCCTCATG 139413 | | || | || || ||||| || | ||| ||||||| | ||| ||| ||| Sbjct 64702 CCAGGGCATTCGTTGGGGCACATCAGAGTCCAAGTGCCGTTCTGTTCGACACGCTGCATA 64643 Query 139414 AACAGATCCGGAATCCACAAAGCGAACAGCAAATCGCGCGCCTTCTTATCTTCCGAACCC 139473 || ||||| |||||||| | |||| | | |||||||||||| |||||| || Sbjct 64642 AAGAGATCGGGAATCCAGAGAGCGTAGAACAAATCGCGCGCACGAACTTCTTCC-TTTCC 64584 Query 139474 ATGTTACGTTTC--ATGTTAAGGAAATCAAAAACGTCAGCGTGCCATGGTTCCAGATAGA 139531 ||| | | || | | || | ||| | | ||||| || ||||| || || || |||| Sbjct 64583 ATGGTTC-TTGCGAAGGTCCATGAACTGCATGACGTCTGCATGCCACGGCTCAAGGTAGA 64525 Query 139532 TGGCCATTGCGCCTTTCCG---TTTGCCACCTTGATCGACGTGTCGTACAGCATTATTGA 139588 |||| | || ||| || |||||||| || || |||| || ||| || || Sbjct 64524 TGGCAAAAGCACCTGGACGCTTGTTGCCACCCTGGTCAACGTAACGAGCAGTGTTGTTAT 64465 Query 139589 ATACGCGCAACATCGGCTCCAGACCGCTCGCTGTTCCGTTGGTG----CTACGGATGGGA 139644 | || || | ||| || | |||||| | | ||| ||||| ||| | | | ||| | Sbjct 64464 AGACTCGTAGCATTGGTACAAGACCGTTGGATGTGCCGTTTGTGCCGCCAATGTATGAGC 64405 Query 139645 CTGTTGCGAGCTCGGACGTCATGTACATTGATGCCGATTCCGCCGCCAAATTTGGATATT 139704 |||| || | || || || |||| | || || ||||| | ||||| || Sbjct 64404 CTGT----GGCCCTGATGTTGTGAACATGAAGACCAATACCGCCAGCGTTCTTGGAGATC 64349 Query 139705 AAAACGCA-ATCGCGTAATGTCTCGTATATACCTCTTATGCTGTCGTCCTGCATCGTGAC 139763 | | || ||| | | || ||||| ||||| |||||||| |||| ||| | || Sbjct 64348 ATGGCACATATCTTG-AGGGTATCGTAGATACCATCAATGCTGTCATCCTTCATGGCCAC 64290 Query 139764 CAGAAAGCATGACGAAAGTTGCGGTAGTTTCGTGCCGGCTGCAAACAGAGTAGGACTCGC 139823 || ||||| || | || |||| || || || || || || || || || Sbjct 64289 CAAGAAGCAGGATGCTAGCTGCGCCTGTGGGGTACCAGCACTGAAAAGTGTTGGCGAAGC 64230 Query 139824 GTGCGTGAACATTTGTTTCGACATCAATTCGTACGTTTCGATGGC-GCTCACAATATCCC 139882 || ||||| | |||||| | | ||| || || || || ||| |||| || Sbjct 64229 ATGTGTGAAGTACTTCAACGACATGTAGTTGTATGTCTCAATCGCTGCT-TCAATGTCTT 64171 Query 139883 TTCCGTGGATACCGACAGAGACTCGCATCAGCATATGTTGGATCCGTTCGGCCACCGCGC 139942 || || || ||||||| || ||||| | ||| ||||| | ||||| ||| || Sbjct 64170 CCCCATGAATGCCGACAGCCACACGCATGATCATCTGTTGCGGTCTCTCGGCAACCTTGC 64111 Query 139943 CCTCGAtttttttCAG--ATAACCGTTCTCTAGGGTCTTGTAGCCAAAGTACCTATAGTT 140000 | || ||| | || || | || ||| || |||||| |||| |||||| ||||| Sbjct 64110 CGTCAATTCTGAGAAGGTATGATCG--CTCCAGAGTCTTGAAGCCGAAGTACTGGTAGTT 64053 Query 140001 GAAATCGAGCGCATA 140015 ||| ||| | |||| Sbjct 64052 GAAGTCGCGGTCATA 64038 >seq33 Length=763136 Score = 122 bits (134), Expect = 8e-23 Identities = 166/229 (72%), Gaps = 2/229 (1%) Strand=Plus/Plus Query 24704 ATGCAGATCTTTATTAAAACGCTAACCGGTAAAACTATTACGCTCGAAGTAGAAGCCACC 24763 ||||| || || | || || || ||||| || || || || |||||||| ||| | || Sbjct 708525 ATGCAAATTTTCGTCAAGACACTCACCGGCAAGACCATCACACTCGAAGTGGAATCATCC 708584 Query 24764 GACACAGTAGAAACGGTAAAACAAAAGATCCAAGACAAAGAAGGAATACCTCCCGATCAA 24823 ||||| | || | || || ||||||||||||||| || || || || || || || Sbjct 708585 GACACGATCGACAACGTCAAGTCAAAGATCCAAGACAAGGAGGGCATCCCACCGGACCAG 708644 Query 24824 CAACGTTTGATCTTTGCCGGGAAACAGCTGGAGGA-TTCGAGAAACATGTCAGATTATAA 24882 || ||| | ||||| ||||| || ||||| ||||| | || || | || ||||| || Sbjct 708645 CAGCGTCTCATCTTCGCCGGCAAGCAGCTTGAGGACGGCCGGACAC-TTTCGGATTACAA 708703 Query 24883 CATTCAAAAGGAATCGACACTACACTTGGTGTTGCGATTGCGCGGAGGC 24931 ||| || ||||| || || || ||||||||| |||| | || |||||| Sbjct 708704 CATCCAGAAGGAGTCCACTCTGCACTTGGTGCTGCGTCTCCGTGGAGGC 708752 Score = 109 bits (120), Expect = 5e-19 Identities = 150/210 (71%), Gaps = 0/210 (0%) Strand=Plus/Plus Query 24704 ATGCAGATCTTTATTAAAACGCTAACCGGTAAAACTATTACGCTCGAAGTAGAAGCCACC 24763 ||||||||||| | || || || ||||| || || || || ||||| || || ||| | Sbjct 708297 ATGCAGATCTTCGTCAAGACTCTCACCGGCAAGACCATCACCCTCGAGGTCGAGTCCAGC 708356 Query 24764 GACACAGTAGAAACGGTAAAACAAAAGATCCAAGACAAAGAAGGAATACCTCCCGATCAA 24823 ||||| | || | || || |||||||| ||||| || || || || || || || Sbjct 708357 GACACCATCGACAATGTCAAGTCGAAGATCCAGGACAAGGAGGGTATCCCACCTGACCAG 708416 Query 24824 CAACGTTTGATCTTTGCCGGGAAACAGCTGGAGGATTCGAGAAACATGTCAGATTATAAC 24883 || || |||| ||||| || || ||||| |||||| | | |||| || || ||| Sbjct 708417 CAGCGCCTGATTTTTGCAGGCAAGCAGCTCGAGGATGGTCGTACTCTGTCGGACTACAAC 708476 Query 24884 ATTCAAAAGGAATCGACACTACACTTGGTG 24913 || || || |||||||| || ||||||||| Sbjct 708477 ATCCAGAAAGAATCGACTCTCCACTTGGTG 708506 >seq332 Length=871922 Score = 82.4 bits (90), Expect = 7e-11 Identities = 131/188 (70%), Gaps = 0/188 (0%) Strand=Plus/Plus Query 24706 GCAGATCTTTATTAAAACGCTAACCGGTAAAACTATTACGCTCGAAGTAGAAGCCACCGA 24765 ||| | ||| | || || || || || || || || |||||||| || || | | ||| Sbjct 250571 GCACAGCTTCGTAAAGACCCTCACTGGCAAGACCATCACGCTCGAGGTCGAGTCGAGCGA 250630 Query 24766 CACAGTAGAAACGGTAAAACAAAAGATCCAAGACAAAGAAGGAATACCTCCCGATCAACA 24825 ||| | || | || || |||||||| ||||| || ||||| || || || || || Sbjct 250631 CACCATCGACAATGTCAAGAGCAAGATCCAGGACAAGGAGGGAATCCCACCGGACCAGCA 250690 Query 24826 ACGTTTGATCTTTGCCGGGAAACAGCTGGAGGATTCGAGAAACATGTCAGATTATAACAT 24885 ||||||||||| || || || ||| |||||||| | | | | || || || ||||| Sbjct 250691 GCGTTTGATCTTCGCTGGAAAGCAGTTGGAGGATGGTCGCACCCTCTCCGACTACAACAT 250750 Query 24886 TCAAAAGG 24893 || |||| Sbjct 250751 CCAGAAGG 250758 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 449895671064040