Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Dothistroma_20septosporum_20[genbank_20GCA_5F002236485.1_202017-07-
28] 343 sequences; 30,616,651 total letters
Query= NC_028091.1
Length=196300
Score E
Sequences producing significant alignments: (Bits) Value
seq87 190 3e-43
seq198 86.0 8e-12
seq43 82.4 1e-10
>seq87
Length=565143
Score = 190 bits (210), Expect = 3e-43
Identities = 884/1385 (64%), Gaps = 31/1385 (2%)
Strand=Plus/Minus
Query 110707 GTAGATGTTTGTTGTGTATGGTTCAAAGCATTCATTATTACCCAAGATTTGTGCGGTGGA 110766
||| ||||| |||||||||| || ||||| || ||| |||| ||| || | ||| ||
Sbjct 65507 GTAAATGTTGCTTGTGTATGGCTCGAAGCACTCGTTAAAGCCCATGATCTGCGAGGTCGA 65448
Query 110767 GGCTGTTGGCATTGGTGCCATCAAAAGACTGTTACGAAGACCCTTCTCCTTGATGCGTTC 110826
|||||||||||| || || | | ||| ||| || | ||| | || ||| |
Sbjct 65447 GGCTGTTGGCATCGGCGCAACGAGAAGCGAGTTGCGCACACCGTGCTGGGCGATCTTGCC 65388
Query 110827 CTTGAGAACATCCCAGTCGTAGTTGAGCTTGGTTTCAC-CTT--CCCACATGTCAAACTG 110883
|||||| | ||||||| || || | ||| | ||| |||||||||| ||||
Sbjct 65387 CTTGAGTGCGGCCCAGTCCCAG---AGGTCGGTAGGAGTCTTGCCCCACATGTCGTACTG 65331
Query 110884 AAGCACCCCTTGGGACGCGGGAGAACCCTCAAAGGTTTCATAGGAACCTTGGGCTTC--A 110941
||| | || || || | ||||| || | || || || | ||| | ||||| |
Sbjct 65330 GAGCTCGCCCTGCGATACTGGAGAGCCTGGGTATGTCTCGTAAGGACC--GAGCTTCTCA 65273
Query 110942 GCCAATTCACAGCTCGCCTCCAGGGATGCGTGATACATGGTTTCAAAGATACGAGCATTC 111001
|| | || || ||||| || | || ||||| ||||| ||||| || | |||
Sbjct 65272 GCAAGCTCGCATGAAGCCTCAAGAGCAGCATGATAGATGGTCTCAAAAATCTGGATATTA 65213
Query 111002 ATCTCCTTGGCTTCATCTGAATCAAATGCGTAGCGGCACAAAATAAATACATCCGCGAGA 111061
| ||||||||| ||| || || |||| |||| | || |||| || |||
Sbjct 65212 AGCTCCTTGGCCTCAGGCGAGTCGAATGGCATGCGGAGAGCCAAGAAGGCATCAGCAAGA 65153
Query 111062 CCTTGAACACCCAAACCAATAGGTCTGTGTCGCATATTAGACTTTCGCGCAGTCTCA-AC 111120
|| | ||||| | |||||| |||| ||| || | || |||||| || ||| ||
Sbjct 65152 CCGTTGACACCAAGACCAATGGGTCGGTGGCGGAAGTTGCTCTTTCGTGCC-TCTGGTAC 65094
Query 111121 GGGATAAAAATTTCTGTCAATGACTCGGTTTAGATTTTTGGTAACAATCTTTGTGATTTC 111180
|| || | || | || ||| ||| || || || || | || |||| ||
Sbjct 65093 TGGGTAGTAGTTGATCTCGATGGTCTTGTTCAGGTTACGTGTGACCACTTTGGTGACCTC 65034
Query 111181 ATGAAGTTTTTCATAATCAAAAGTGCGAGTCTCTTCATTGACATACTTTGGAAGGGCGAT 111240
|||||||| | | |||||| |||| | ||| || | || || || |
Sbjct 65033 GTGAAGTTTCTTGAAGTCAAAAACCTCGTTCTCGATGTCGACGTAGGTGGGCAGAGCAAG 64974
Query 111241 TGATGCCAAATTGCAAACAGCCGTCTCATCCTTATCTGTGTACTCTAAAATTTCTGTACA 111300
|| |||| |||||| ||||| |||||| | | | |||||| | || || || ||
Sbjct 64973 CGAAGCCAGATTGCAGACAGCGACCTCATCTGGAGCAGAGTACTCCATGATCTCAGTGCA 64914
Query 111301 TAAGTTGGAACTCTTAATCGTCCCCAAATTCTTTTGGTTACTCTTCTTGTTGCACGCATC 111360
|| || || ||||| || || || | |||||| || || ||||| |||| || ||
Sbjct 64913 CAAATTAGAGCTCTTGATGGTGCCAAGATTCTTCTGATTGCTCTTGCGGTTGGCGGCGTC 64854
Query 111361 CTTGTAGAGCATGTAGGGCGTCCCCGTCTCCGTCTGTGATTTGAGAATAGCCTTCCAAAC 111420
|||||| || ||| | || || || ||||| ||||| | | ||||||||| | ||| |
Sbjct 64853 CTTGTACAGAATGAAAGGTGTGCCGGTCTCGGTCTGCGCCTCGAGAATAGCATACCATAT 64794
Query 111421 ATCGGCGGCTGGTACAATGGCGTTGGCCCGTCCCTCCGC-CTCGTACTTTGTGTAGAGGG 111479
| || | || | | ||||| | ||| | | ||| || ||| ||
Sbjct 64793 TTTCTGAGCACGAACCGTCTCAC-GGCCCTTGCCTTCTCTCTCATAACGCTCGTACAGCT 64735
Query 111480 CTTCAAACTCCTCACCCACCGCGTCGGAGAGACCTGGTGCCTT-GTCTGGACAGAAAAGA 111538
| | ||||| ||||| | || || ||||| || || || || || || | |||
Sbjct 64734 CCTTGAACTCGTCACCGTAAACATCCGACAGACCAGG-GCATTCGTTGGGGCACATCAGA 64676
Query 111539 GACCATTGACCACCTTCCTCAACCCGCTTCATGAAAAGGTCTGGAATCCACAGGGATGAA 111598
| ||| || | || || |||| ||| || || || |||||||| || | |
Sbjct 64675 GTCCAAGTGCCGTTCTGTTCGACACGCTGCATAAAGAGATCGGGAATCCAGAGAGCGTAG 64616
Query 111599 AAGAGATCTCTACACCGAGCCTCTTCGTCACCTTGGTTGAGTCGTAACTCAAGGAACTCC 111658
|| | ||| | ||| | ||||| | || ||||| || | || | ||||| |
Sbjct 64615 AACAAATCGCGCGCACGAACTTCTTCCTTTCCATGGTTCTTGCGAAGGTCCATGAACTGC 64556
Query 111659 ATGATATCCGCGTGCCATGGCTCAAGATAGACTGCGATAGATCCCTTTCGACGC------ 111712
|||| || || ||||| |||||||| |||| || | || || | |||||
Sbjct 64555 ATGACGTCTGCATGCCACGGCTCAAGGTAGATGGCAAAAGCACC---TGGACGCTTGTTG 64499
Query 111713 CCAGCTTGATTTACATAGCGCGCTGTGGCGTTAAATACGCGAAGCATTGGAATAATACCA 111772
||| | || | || || || || ||| |||| | || || |||||||| | || |||
Sbjct 64498 CCACCCTGGTCAACGTAACGAGCAGTGTTGTTATAGACTCGTAGCATTGGTACAAGACCG 64439
Query 111773 TCTGATTGACCATTTGTCCCCCGAAT--ACGAGATTTATTGGCTCTCACATCATGGATGT 111830
| ||| || ||||| || | ||| | ||| | |||| || | | || | |
Sbjct 64438 TTGGATGTGCCGTTTGTGCCGCCAATGTATGAGCCTG--TGGCCCTGATGTTGTGAACAT 64381
Query 111831 GCATCCCAATACCCCCAGCCCACTTTGAGATTTGCGCACACTCCGTAAGAGTTCCATAGA 111890
| | |||||||| ||||| ||| ||||| ||||| | | || || | ||||
Sbjct 64380 GAAGACCAATACCGCCAGCGTTCTTGGAGATCATGGCACATATCTTGAGGGTATCGTAGA 64321
Query 111891 TACCGTTGATTGAGTCCTCCTTGTTGGCGATAAGGAAGCAACTGGACATCTGCGGTCTTG 111950
|||| | || ||| ||||| |||| | | |||||| | | ||||| ||
Sbjct 64320 TACCATCAATGCTGTCATCCTTCATGGCCACCAAGAAGCAGGATGCTAGCTGCGCCTGTG 64261
Query 111951 GTGTACCAGCATTGAAGAGGGTTGGTGTTGCGTGAATGAACATACCTTGG-GACATCTTG 112009
| ||||||||| |||| || ||||| | || || |||| ||| | ||||| | |
Sbjct 64260 GGGTACCAGCACTGAAAAGTGTTGGCGAAGCATGTGTGAAG-TACTTCAACGACATGTAG 64202
Query 112010 TCGTATGTCTCCAAGACAGAATCAATGTCTTCCCCGTGGATGCCGATTGCGACCCGCATG 112069
| ||||||||| | | | |||||||||||||| || ||||||| || || ||||||
Sbjct 64201 TTGTATGTCTCAATCGCTGCTTCAATGTCTTCCCCATGAATGCCGACAGCCACACGCATG 64142
Query 112070 AACAT 112074
| |||
Sbjct 64141 ATCAT 64137
>seq198
Length=423218
Score = 86.0 bits (94), Expect = 8e-12
Identities = 135/188 (72%), Gaps = 4/188 (2%)
Strand=Plus/Plus
Query 122677 CCCTCATCTCGGGAAATAAGTTCATTTGAGAAGCATAGACCTGGCATGAGACCCCGCTTC 122736
|||||||| ||||| || || || || ||||| || || | ||||||||| || |||
Sbjct 264632 CCCTCATCACGGGAGATGAGCTCGTTCGAGAATGTGAGCCCGGCCATGAGACCACGTTTC 264691
Query 122737 TTCAACCAATAAATAGC-GCAGAATGACCCGGAGAAGAAGATACCCTCCACACACGCAAA 122795
|||| ||| | ||||| ||| || || || ||||||||||||||||| || |||||
Sbjct 264692 TTCAGCCAGAAGATAGCAGCAAAA-GATCCAGAGAAGAAGATACCCTCAACGGCGGCAAA 264750
Query 122796 CGCAAAAAGGCGTTCGGCGAAGGAGCGAG-ACTTTGCATCAAACCATTTCATTGCCCATT 122854
|||| || || |||||| | |||| ||| || || |||| || ||||| |
Sbjct 264751 TGCAATGAGACGGAGGGCGAATG-TCGAGTTCTTGTCAGAAATCCATCGCAACGCCCAGT 264809
Query 122855 TCGCCTTC 122862
||||||
Sbjct 264810 CAGCCTTC 264817
>seq43
Length=758261
Score = 82.4 bits (90), Expect = 1e-10
Identities = 147/208 (71%), Gaps = 10/208 (5%)
Strand=Plus/Minus
Query 182517 AGACCCTTGATGTGAGAACCATCATTATCGGCATCTGTCATAATCATAAGACGACCATAG 182576
||||||||||||||||| ||||| | ||| ||| ||||| ||||| ||| | |||||
Sbjct 613210 AGACCCTTGATGTGAGAGCCATCGTGATCCTGATCGGTCATGATCATCAGATGGCCATAA 613151
Query 182577 CG-AAG--TTCAGAAACATCTTGGTAGTCTTTTCCTTGTTGAAGACCAAGGATCTTCTTG 182633
|| ||| || || |||| |||||| || ||||| ||||| | | |||||||
Sbjct 613150 CGCAAGCCTTTAG---TATCTGTGTAGTCCTTCTTATGTTGCAGACCCAAAAACTTCTTG 613094
Query 182634 A-GATCATTGAA-CTCCTGGTTTGATGTAAGCTGTGCCACCGAAGCGTCCCGAACATTCT 182691
| | || |||| ||| ||| || || ||| | | ||||| || || |||||
Sbjct 613093 ATGTTC--TGAATCTCGGCGTTCTTTGAAATCTGGTCGATGGAAGCATCGCGCACATTGA 613036
Query 182692 TACATTTACCGCGAAGTGGGAACACACC 182719
| ||||| ||||||||||| |||||
Sbjct 613035 GAATCTTACCCCGAAGTGGGAAGACACC 613008
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 628029307312800
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |