Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Dothistroma_20septosporum_20[genbank_20GCA_5F002236485.1_202017-07- 28] 343 sequences; 30,616,651 total letters Query= NC_028092.1 Length=193301 Score E Sequences producing significant alignments: (Bits) Value seq87 212 8e-50 seq198 123 3e-23 >seq87 Length=565143 Score = 212 bits (234), Expect = 8e-50 Identities = 1114/1751 (64%), Gaps = 53/1751 (3%) Strand=Plus/Minus Query 117836 TCGGAGGTAGTACATCCCCGTCTTGAGCCCCTGCTTCCAGGCATACATATGCATTGAGGA 117895 ||||||||||||||| || |||||||| || ||||||| || | ||||| || Sbjct 65852 TCGGAGGTAGTACATGCCAGTCTTGAGACCGAGCTTCCAACCAGCGAAGTGCATGCTGGT 65793 Query 117896 CAACTTGGAGAGGGTTGGACTTTCCATGAAGAGGTTCATACTTTGGGATTGATCGATGAA 117955 | |||| | |||||| | ||| || ||||| || || || || ||||| || Sbjct 65792 AATCTTGCCCATGGTTGGCTCCTTCATATGGATGTTCAAGCTCTGAGACTGGTCGATAAA 65733 Query 117956 GCGTCCCCGATCCGCCGCCATATCAATCACATCCTTCATCT---TGATTTCCCACACAGT 118012 || || || || ||||| | ||| || || |||| ||||| || || Sbjct 65732 AGCACCACGGTCAGCAGCCATCTG---CACGATGTTACGCTGGCTGATCTCCCAGACGGT 65676 Query 118013 CCTGTAGAGGTTCTTAATATCATCTGGGATATCCACGATATTTTGGATGGATCCAC---C 118069 | ||||||| ||| | || ||||| || | ||| || ||||| ||| | Sbjct 65675 CTTGTAGAGTGCCTTGAGGTCGTCTGGAATGTTGGGGATGCGCTGAATGGAGCCATTGTC 65616 Query 118070 CGCCTTGACCATGAGATCCTTCATATCCTTTGACCAGAGACCAATCTTTTTGAGATCCTC 118129 || ||| || | | |||||| | || ||||||||| ||| | |||||||| Sbjct 65615 AGCAATGA---TGCGGTTCTTCATGTTCTCTGACCAGAGGCCACGGTCGACGAGATCCTT 65559 Query 118130 CACGAG--ATGCTTATTGACAACAACAAACTCACCCGCGAGGGTGCGTCTCAGA-TAGAT 118186 || || ||| | |||| || ||||| || || | || | ||| || || Sbjct 65558 CAGAAGCCATGGGT--TGACGACCTGGAACTCGCCAGCCAACACACGACG-AGAGTAAAT 65502 Query 118187 ATTGGTCGTGTATGGCTCAAAGCACTCATTGTTACCCAAGATTTGGGCTGTGGAGGCTGT 118246 ||| | ||||||||||| |||||||| || |||| ||| || | || |||||||| Sbjct 65501 GTTGCTTGTGTATGGCTCGAAGCACTCGTTAAAGCCCATGATCTGCGAGGTCGAGGCTGT 65442 Query 118247 GGGCATGGGTGCCATGAGAAGGCTGTTACGGAGACCCTTTT---CCCTAATGCGTTCCTT 118303 ||||| || || | |||||| ||| || | ||| | | | | ||| |||| Sbjct 65441 TGGCATCGGCGCAACGAGAAGCGAGTTGCGCACACCGTGCTGGGCGATCTTGC---CCTT 65385 Query 118304 GAGAGCGTCCCAGTCGTAGTTGAGCTTTG---TCTCCCCCTGCCACATATCAAACTGGAG 118360 ||| ||| ||||||| || | | | ||| ||| ||||| || ||||||| Sbjct 65384 GAGTGCGGCCCAGTCCCAGAGGTCGGTAGGAGTCTTGCCC---CACATGTCGTACTGGAG 65328 Query 118361 GATACCTTGGGACGCTGGCGATCCCTCAAATGTCTCATATGGGCCCTCAACCTCCGCCAA 118420 || || || |||| || || ||||||| || || || ||| || | Sbjct 65327 CTCGCCCTGCGATACTGGAGAGCCTGGGTATGTCTCGTAAGGACCGAGCTTCTCAGCAAG 65268 Query 118421 TTCGGAGCTCGCCTCGAGGGCTGCGTGATACATTGTTTCAAAAATGCGAGCATTCATTGC 118480 ||| | ||||| || || || ||||| || || |||||||| | ||| | | Sbjct 65267 CTCGCATGAAGCCTCAAGAGCAGCATGATAGATGGTCTCAAAAATCTGGATATTAAGCTC 65208 Query 118481 CTTGGCCTCGTCGGAATCAAACGCGAGTCGGCACAAAATAAATACATCCGCGAGACCTTG 118540 ||||||||| || || || | | ||| | || |||| || ||||| | Sbjct 65207 CTTGGCCTCAGGCGAGTCGAATGGCATGCGGAGAGCCAAGAAGGCATCAGCAAGACCGTT 65148 Query 118541 GACACCGAGGCCAATTGGGCGATGTCTCATATTAGACTTCCGAGCGGTCTCC-ACGGGAT 118599 |||||| || ||||| || || || | | || ||| || || ||| || || | Sbjct 65147 GACACCAAGACCAATGGGTCGGTGGCGGAAGTTGCTCTTTCGTGCC-TCTGGTACTGGGT 65089 Query 118600 AAAAATTCCTATCGATAACCCTATTTAGATTTTTGGTGACAACCTTTGTGATTTCATGAA 118659 | | || | ||||| | | || || || ||||| || || |||| || |||| Sbjct 65088 AGTAGTTGATCTCGATGGTCTTGTTCAGGTTACGTGTGACCACTTTGGTGACCTCGTGAA 65029 Query 118660 GCTTTTCGTAATCAAAA-CTGCGAGTCTCTTCATTGACATACTTAGGAAGGGCGATTGAC 118718 | || | | | |||||| | || |||| | ||| || | || || || | || Sbjct 65028 GTTTCTTGAAGTCAAAAACCTCGT-TCTCGATGTCGACGTAGGTGGGCAGAGCAAGCGAA 64970 Query 118719 GCCAGATTACACACAGAGGTCTCATCCTTATCAGTGTACTCTATAATTTCCGTGCACAAG 118778 |||||||| || |||| | |||||| | ||| |||||| || || || |||||||| Sbjct 64969 GCCAGATTGCAGACAGCGACCTCATCTGGAGCAGAGTACTCCATGATCTCAGTGCACAAA 64910 Query 118779 TTTGAACTCTTAATGGTGCCCAAGTTCTTTTGATTTGACTTTGTGTTACACGCATCCTTG 118838 || || ||||| |||||||| | ||||| ||||| ||| ||| || |||||| Sbjct 64909 TTAGAGCTCTTGATGGTGCCAAGATTCTTCTGATTGCTCTTGCGGTTGGCGGCGTCCTTG 64850 Query 118839 TAAAGCATGTATGGCGTCCCCGTCTCCGTTTGGGACTTGAGAATAGCCTTCCAGACATCG 118898 || || ||| | || || || ||||| || || | || ||||||||| | ||| | | Sbjct 64849 TACAGAATGAAAGGTGTGCCGGTCTCGGTCTGCGCCTCGAGAATAGCATACCATATTTTC 64790 Query 118899 GCAGCTGGCACAGTGGCGTTGGCTCGCCCCTCTTCCTCGTACTTTGTGTAGAGGGCTTCA 118958 ||| | || || | | | || ||| ||| || ||| || | | Sbjct 64789 TGAGCACGAACCGTCTCACGGCCCTTGCCTTCTCTCTCATAACGCTCGTACAGCTCCTTG 64730 Query 118959 AACTCTTCACCCACGGCCTCTGAGAGCCCTGGTGCCTTATCTGGG-CAGAAGAGAGACCA 119017 ||||| ||||| | || || || || || || || |||| || | |||| ||| Sbjct 64729 AACTCGTCACCGTAAACATCCGACAGACCAGG-GCATTCGTTGGGGCACATCAGAGTCCA 64671 Query 119018 TTGACCACCCTCCTCAACCCGCTTCATGAAGAGGTCTGGGATCCAGAGCGCCGAGAAGAG 119077 || || || || |||| ||| ||||| || || |||||||| || |||| | Sbjct 64670 AGTGCCGTTCTGTTCGACACGCTGCATAAAGAGATCGGGAATCCAGAGAGCGTAGAACAA 64611 Query 119078 ATCCCGACAGCGAGCTTCTTCATCCCCCTGATTGAGACGCAACTCCAAAAAGTCCATGAT 119137 ||| || ||| ||||||| | || || || || | |||| || | ||||| Sbjct 64610 ATCGCGCGCACGAACTTCTTCCTTTCCATGGTTCTTGCGAAGGTCCATGAACTGCATGAC 64551 Query 119138 ATCCGCGTGCCACGGTTCCAGGTACACCGCGATTGACCCCTTACGACGA------CCAGC 119191 || || |||||||| || ||||| | || | | | ||| |||| ||| | Sbjct 64550 GTCTGCATGCCACGGCTCAAGGTAGATGGCAAAAG-CACCTG--GACGCTTGTTGCCACC 64494 Query 119192 CTGGTTTACATACCTCGCAGTGGCGTTAAATACACGAAGCATTGGAATGATACCATCGGA 119251 ||||| || || | |||||| |||| | || || |||||||| | | ||| | ||| Sbjct 64493 CTGGTCAACGTAACGAGCAGTGTTGTTATAGACTCGTAGCATTGGTACAAGACCGTTGGA 64434 Query 119252 TTGGCCATTTGTCCCCCGAAT--ACGAGACTTATTGGCTCTGACATCGTGGATGTGCATA 119309 | ||| ||||| || | ||| | ||| || |||| |||| | ||| | || | | Sbjct 64433 TGTGCCGTTTGTGCCGCCAATGTATGAGCCTG--TGGCCCTGATGTTGTGAACATGAAGA 64376 Query 119310 CCAATACCCCCTGCCCACTTTGAGATTTGCGCGCACTCCGTGAGACTGCCGTAGATCCCA 119369 |||||||| || || ||| ||||| || || | |||| | ||||||| ||| Sbjct 64375 CCAATACCGCCAGCGTTCTTGGAGATCATGGCACATATCTTGAGGGTATCGTAGATACCA 64316 Query 119370 TCGATCGAGTCACCCTTATTTGCGATGAGGAAGCAGCTCGACATTTGAGGCCTG-GGTGT 119428 || || |||| |||| | || | | ||||||| | | || | |||| || || Sbjct 64315 TCAATGCTGTCATCCTTCATGGCCACCAAGAAGCAGGATGCTAGCTGCG-CCTGTGGGGT 64257 Query 119429 ACCAGCGTTGAAGAGAGTTGGTGTCGCGTGGATGAACATACCTTGG-GACATCTTGTCGT 119487 |||||| |||| || ||||| | || || |||| ||| | ||||| | || || Sbjct 64256 ACCAGCACTGAAAAGTGTTGGCGAAGCATGTGTGAAG-TACTTCAACGACATGTAGTTGT 64198 Query 119488 AGGTCTCCAAGACGGCGGGAATGTCTTCCCCGTGAATACCGATCGAGACCCGCATAAACA 119547 | ||||| | | || |||||||||||| ||||| |||| | || ||||| | || Sbjct 64197 ATGTCTCAATCGCTGCTTCAATGTCTTCCCCATGAATGCCGACAGCCACACGCATGATCA 64138 Query 119548 TGTATTGGGGT 119558 | | ||| ||| Sbjct 64137 TCTGTTGCGGT 64127 >seq198 Length=423218 Score = 123 bits (136), Expect = 3e-23 Identities = 528/819 (64%), Gaps = 29/819 (4%) Strand=Plus/Plus Query 129728 TAGTCCCCAACCCGCTTCTCGAAGAAGTTTGTCTTCCCGTCCAAGCTGATATTCTCCATA 129787 || || ||||| ||||||||||||||||| ||||| ||| ||| || |||||||| Sbjct 264326 TACTCGCCAACACGCTTCTCGAAGAAGTTGGTCTTGCCGCCCAGCGAAATGTTCTCCATG 264385 Query 129788 AAATCAAATGGGTTCTTTGAGTTCCAAA-----TTGCTGGC-ACTCCAATCTGTTTGAGG 129841 || || || ||||| | | ||| | | ||| || | | | | | | || Sbjct 264386 AAGTCGAAGGGGTTGGTGGCGTTGTAGAACTTCTTGTTGCCGAGTGCCAACAGT------ 264439 Query 129842 AGACGATCCGAGACGTACTCAATGTACTCAGACATCTTCTCGGAGTTCATACCGATGAGG 129901 || ||||| | |||| | |||||||| | ||||| | | |||||| || | || Sbjct 264440 AGGCGATCGGCGACGAATTCAATGTATTGTGACATGAGGCCAGCGTTCATCCCCAGAAGC 264499 Query 129902 TTACATGGGAGCGCGTCCAAGATGAACCCCTTCTCAATGTCCACAGCTTCCCGCACGATG 129961 || ||||| || ||||| | |||| ||| ||| || || || || | |||| Sbjct 264500 TTGCATGGAAGAGCGTCTGTCAAGAACTCCTGCTCGATCGTGACGGCCTCGGTGATGATG 264559 Query 129962 GCGTG---AATGGTCTCCGTGCCAGGTCTATTGCGCAAAGTCTTGAAGAGTTCCACGGCA 130018 || || || || || | || | || || | | ||| || ||| Sbjct 264560 CTCTGCACAAGGGCCTG-GTTC--GGCTTGTTCTTCAGATGCGAGAACAGAAGGCAGGCG 264616 Query 130019 AACTCCTGGTGGAGACCCTCGTCACGGGAGATGAGTTCATTCGAGAAGCACAGACCTGGC 130078 || || ||| | ||||| |||||||||||||| || |||||||| || || | | Sbjct 264617 AAGTCTGTGTGCATGCCCTCATCACGGGAGATGAGCTCGTTCGAGAATGTGAGCCCGGCC 264676 Query 130079 ATGAGACCCCGCTTCTTCAACCAGAAAATCGCACAAAATGAGCCAGAGAAGAAGATCCCC 130138 |||||||| || ||||||| |||||| || ||| ||| || |||||||||||||| ||| Sbjct 264677 ATGAGACCACGTTTCTTCAGCCAGAAGATAGCAGCAAAAGATCCAGAGAAGAAGATACCC 264736 Query 130139 TCCACACACGCGAACGCAAAGAGACGCTCAGCAAAGGAGCGGGACTTTGT-ATCAAACCA 130197 || || || || |||| |||||| || || | || | |||| | || ||| Sbjct 264737 TCAACGGCGGCAAATGCAATGAGACGGAGGGCGAATG-TCGAGTTCTTGTCAGAAATCCA 264795 Query 130198 CTTCATCGCCCACTGCGCCTTTTTCTCGATACACGGGACGGTCTGGATCGC-TTCAAAGA 130256 || |||||| | ||||| | ||| || |||| | | | ||| || || || Sbjct 264796 TCGCAACGCCCAGTCAGCCTTCCTGCGGATGCATGGGATGTTGTCGATGGCATTGAACAG 264855 Query 130257 GTTCCTTCTTTTCTGATGGATCTTTGATGTACTTATCTATGAGTTTTGAATATGTTTCGC 130316 || ||| | || ||| || ||||||| |||| ||||| |||||||| ||| Sbjct 264856 GTATGTTCGCTGCT-TTGGCTCGCTGATGTATGTATCGATGAGAAGGGAATATGTCTCGG 264914 Query 130317 CATGGACCAT-TTCATTATGGCACTGATACGCGTAGAAAGAGCGCGCTTCGCTTATCTGT 130375 |||| | | ||| || | ||| | ||||||| | || || || ||||| Sbjct 264915 AGTGGATGTTCTCCATCAT-GATCTGGAAGCCGTAGAAGCATCGTGCCTCCGGGATCTGC 264973 Query 130376 ACCTCATCTGCAAAATTG-TTATTGATATTCTCAAAAACAATTCCATCGGACCCAGCAAA 130434 |||||| || || | | || ||||| ||||| |||||||| | || || Sbjct 264974 ACCTCA-GAGCTGAAGCGCTCGACGAGGTTCTCGTTGACAATGCCATCGGATGCGGCGAA 265032 Query 130435 AAACGCCAGGATATACTTTATGAATTTCTGTTCATTCTCGTTCA---GGGTCTTCCAGTC 130491 || || |||| | ||||| |||| | ||||| | | | |||||||| Sbjct 265033 GAATGCGAGGACGTGTGAGATGAAGAATCGTTCGTCGTCGTTGAGTCGCTTGTTCCAGTC 265092 Query 130492 GTCAAGATCCTTCGAGAGATCTACCTCCTCCGCAGTCCA 130530 || ||||||||||| ||||| | |||||| || ||||| Sbjct 265093 GTGGAGATCCTTCGACAGATCAATCTCCTCAGCTGTCCA 265131 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 618432548459080