Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Dothistroma_20septosporum_20[genbank_20GCA_5F002236485.1_202017-07-
28] 343 sequences; 30,616,651 total letters
Query= NC_028093.1
Length=182309
Score E
Sequences producing significant alignments: (Bits) Value
seq87 297 2e-75
seq198 111 2e-19
seq43 93.3 5e-14
>seq87
Length=565143
Score = 297 bits (328), Expect = 2e-75
Identities = 913/1389 (66%), Gaps = 41/1389 (3%)
Strand=Plus/Plus
Query 104231 ATGTTCATGCGCGTGGCCATCGGTATTCATGGGGAAGACATTGATTCTGTCTTGGAGACA 104290
||| ||||||| ||||| |||| |||||||||||||||||||| | | | ||||||
Sbjct 64137 ATGATCATGCGTGTGGCTGTCGGCATTCATGGGGAAGACATTGAAGCAGCGATTGAGACA 64196
Query 104291 TACGACAAGATGTCCCA-AGGTATGTTCATTCACGCAACACCAACCCTCTTCAATGCTGG 104349
||| || | ||||| | ||| |||| || || | ||||| || |||| ||||||
Sbjct 64197 TACAACTACATGTCGTTGAAGTAC-TTCACACATGCTTCGCCAACACTTTTCAGTGCTGG 64255
Query 104350 TACACCA-AGACCC--CAAATGTCCAGTTGCTTCCTTATCGCCAACAAGGAGGACTCAAT 104406
||| ||| || | | | | ||| |||||| | | |||| ||||| ||| ||
Sbjct 64256 TACCCCACAGGCGCAGCTAGCATCC---TGCTTCTTGGTGGCCATGAAGGATGACAGCAT 64312
Query 104407 CAACGGTATCTATGGAACTCTTACGGAGTGTGCGCAAATCTCAAAGTGGGCTGGGGGTAT 104466
| |||||||| | || || | | ||||| ||||| ||| ||||| |||||
Sbjct 64313 TGATGGTATCTACGATACCCTCAAGATATGTGCCATGATCTCCAAGAACGCTGGCGGTAT 64372
Query 104467 TGGGATGCACATCCATGATGTGAGAGCCAATAAATCTCGTA--TTCGGGGGACAAATGGT 104524
||| | || | || | | || |||| | ||| || || | || ||||| ||
Sbjct 64373 TGGTCTTCATGTTCACAACATCAGGGCCAC--AGGCTCATACATTGGCGGCACAAACGGC 64430
Query 104525 CAATCAGATGGTATTATTCCAATGCTTCGCGTATTTAACGCCACAGCGCGCTATGTAAAT 104584
||| | ||| || | |||||||| || || | |||| ||| || || || || |
Sbjct 64431 ACATCCAACGGTCTTGTACCAATGCTACGAGTCTATAACAACACTGCTCGTTACGTTGAC 64490
Query 104585 CAAGCTGG------GCGTCGAAAGGGATCTATCGCAGTCTATCTTGAGCCATGGCACGCG 104638
|| | ||| ||||| | || || | || |||| |||||||| ||||| ||
Sbjct 64491 CAGGGTGGCAACAAGCGTCCA---GGTGCTTTTGCCATCTACCTTGAGCCGTGGCATGCA 64547
Query 104639 GATATCATGGAGTTCCTTGAGTTGCGTCTCAACCAAGGTGACGAGGAGGCGCGGTGC-CG 104697
|| ||||| ||||| | || | || ||||| || | || || | || ||| ||
Sbjct 64548 GACGTCATGCAGTTCATGGACCTTCGCAAGAACCATGGAAAGGAAGAAGTTCG-TGCGCG 64606
Query 104698 CGATCTCTTCTCCGCTCTCTGGATTCCAGATCTCTTCATGAAGAGAGTTGAGGAGAGTGG 104757
|||| | |||| ||||||||||||||| |||||||| ||| || | || || ||| ||
Sbjct 64607 CGATTTGTTCTACGCTCTCTGGATTCCCGATCTCTTTATGCAGCGTGTCGAACAGAACGG 64666
Query 104758 CAATTGGTCTCTCTTTTGTCCAGAC-AAGGCACCTGGTCTCTCCGATGCCGTGGGTGAGG 104816
|| |||| |||| | || || || || || |||||||| || |||| ||||| |
Sbjct 64667 CACTTGGACTCTGATGTGCCCCAACGAATGC-CCTGGTCTGTCGGATGTTTACGGTGACG 64725
Query 104817 AGTTTGAAGCCCTTTACACAAAGTACGAGGAAGAAGGTCGGGCGACTGCGACGGTGCCAG 104876
|||| | | || ||| || ||| |||||| || || |||||| | |
Sbjct 64726 AGTTCAAGGAGCTGTACGAGCGTTATGAGAGAGAAGGCAAGGGCCGTGAGACGGTTCGTG 64785
Query 104877 CTGCCGATGTGTGGAAAGCTATTCTCAAGTCTCAAACCGAGACTGGTACACCATACATGC 104936
|| | | ||| | ||||||||| || | || |||||||| || ||||| | ||| |
Sbjct 64786 CTCAGAAAATATGGTATGCTATTCTCGAGGCGCAGACCGAGACCGGCACACCTTTCATTC 64845
Query 104937 TTTACAAAGACGCCTGTAACCAAAAGAGTAATCAAAAGAATTTGGGTGTGATCAAGAGTT 104996
| ||||| |||||| |||| ||||| ||||| |||||| | || |||||||| |
Sbjct 64846 TGTACAAGGACGCCGCCAACCGCAAGAGCAATCAGAAGAATCTTGGCACCATCAAGAGCT 64905
Query 104997 CCAATCTCTGTACAGAAATCTTGGAATTTACAGACAAAGATGAGACGGCTGTGTGTAACC 105056
| ||| | || || || ||| |||| | | | ||||||| ||||| || || |
Sbjct 64906 CTAATTTGTGCACTGAGATCATGGAGTACTCTGCTCCAGATGAGGTCGCTGTCTGCAATC 64965
Query 105057 TCGCATCAATCGCTCTCCCCAAGTATGTGGATCCAGAGACAAAGACATTTGATTATGAAA 105116
| || || | ||||| |||| || || || |||| || ||||| | | |
Sbjct 64966 TGGCTTCGCTTGCTCTGCCCACCTACGTCGACATCGAGAACGAGGTTTTTGACTTCAAGA 65025
Query 105117 AACTCCACGAAGTTACGAAAACTGTCACCAAAAACCTAAACAGAGTTATTGATAGAAATT 105176
|||| ||||| || || ||| ||||| ||||| |||| || || | || |
Sbjct 65026 AACTTCACGAGGTCACCAAAGTGGTCACACGTAACCTGAACAAGACCATCGAGATCAACT 65085
Query 105177 TTTACCCCGT-TGAGACTGCTCGTAAATCTAATATGAGACACCGTCCAATTGGTCTCGGT 105235
||||| || ||| || || || || | | ||||| || |||||||| |||
Sbjct 65086 ACTACCCAGTACCAGA-GGCACGAAAGAGCAACTTCCGCCACCGACCCATTGGTCTTGGT 65144
Query 105236 GTTCAGGGTCTCGCGGATGTATTCATTCTTTGTCGCCACG-CATTTGATTCCGACGAAGC 105294
|| | ||||| || |||| ||| || | || || | |||| || || || ||
Sbjct 65145 GTCAACGGTCTTGCTGATGCCTTC-TTGGCTCTCCGCATGCCATTCGACTCGCCTGAGGC 65203
Query 105295 GAAGGAAATCAATGCGCGCATATTTGAGACCATGTATCACGCCGCTCTTGAGGCGAGTTC 105354
||||| | ||| | || ||||||||||| ||||| || ||||||||||| |||
Sbjct 65204 CAAGGAGCTTAATATCCAGATTTTTGAGACCATCTATCATGCTGCTCTTGAGGC---TTC 65260
Query 105355 A---GAGTTGGCAGAGGTTGATGGTCCATATGAAACCTTTGAGGGTTCTCCAGCTTCACA 105411
| ||| | || ||| ||||| || || || | || ||||||| || ||
Sbjct 65261 ATGCGAGCTTGCTGAGAAGCTCGGTCCTTACGAGACATACCCAGGCTCTCCAGTATCGCA 65320
Query 105412 AGGGGTGCTTCAATTTGATATGTGGG--AAG-GTGAGACCAAGCTTCACTACGACTGGGA 105468
|| | ||| || | || ||||||| ||| | ||| | || || |||||||
Sbjct 65321 GGGCGAGCTCCAGTACGACATGTGGGGCAAGACTCCTACCGACCT---CTGGGACTGGGC 65377
Query 105469 AGCTCTCAAGGAACGCATCAAGGAGAAGGGTCTTCGTAACAGTCTCCTCATGGCTCCAAT 105528
|| ||||||| ||| || | ||| | || ||| || ||| | || || ||
Sbjct 65378 CGCACTCAAGGGCAAGATCGCCCAGCACGGTGTGCGCAACTCGCTTCTCGTTGCGCCGAT 65437
Query 105529 GCCAACAGCCTCCACCGCACAAATCTTGGGTAATAATGAATGCTTTGAACCCTACACGAC 105588
|||||||||||| ||| | || ||| |||| ||| || ||||| || || ||||| |
Sbjct 65438 GCCAACAGCCTCGACCTCGCAGATCATGGGCTTTAACGAGTGCTTCGAGCCATACACAAG 65497
Query 105589 GAACATCTA 105597
||||| ||
Sbjct 65498 CAACATTTA 65506
>seq198
Length=423218
Score = 111 bits (122), Expect = 2e-19
Identities = 116/150 (77%), Gaps = 2/150 (1%)
Strand=Plus/Minus
Query 94807 CGACTCTTCGCATTTGCGTGTGTTGAGGGTATCTTCTTCTCTGGTTCCTTCTGC-GCTAT 94865
|| ||| | |||||||| ||||||||||||||||||||||| | ||| ||| |||||
Sbjct 264762 CGTCTCATTGCATTTGCCGCCGTTGAGGGTATCTTCTTCTCTGGAT-CTTTTGCTGCTAT 264704
Query 94866 TTATTGGCTCAAGAAGCGAGGTCTCATGCCAGGTCTCTGCTTCTCCAACGAGCTTATCTC 94925
| ||||| ||||| || ||||||||| | || ||| ||||| |||||||| |||||
Sbjct 264703 CTTCTGGCTGAAGAAACGTGGTCTCATGGCCGGGCTCACATTCTCGAACGAGCTCATCTC 264644
Query 94926 TCGTGACGAGGGACTCCACCAAGAGTTTGC 94955
||||| ||||| | ||| ||| || ||
Sbjct 264643 CCGTGATGAGGGCATGCACACAGACTTCGC 264614
>seq43
Length=758261
Score = 93.3 bits (102), Expect = 5e-14
Identities = 148/206 (72%), Gaps = 6/206 (3%)
Strand=Plus/Minus
Query 169169 AGACCCTTGATGTGGGAACCGTCGTTATCGGCATCCGTCATGATCATGAGACGACCATAC 169228
|||||||||||||| || || |||| ||| ||| ||||||||||| ||| | |||||
Sbjct 613210 AGACCCTTGATGTGAGAGCCATCGTGATCCTGATCGGTCATGATCATCAGATGGCCATAA 613151
Query 169229 CG-AAGCTCGGAAACATCTTGATAGTCCTTACCCTGTTGAAGACCCAAGATCTTCTTGA- 169286
|| |||| | | |||| |||||||| ||||| |||||||| | ||||||||
Sbjct 613150 CGCAAGC-CTTTAGTATCTGTGTAGTCCTTCTTATGTTGCAGACCCAAAAACTTCTTGAT 613092
Query 169287 GATCGTTGAA-CTCTTGGTTTGATGTGAGCTGTGTGACAGAGGCATCGCGAACATTCTTA 169345
| || |||| ||| ||| || | ||| || || |||||||| ||||| |
Sbjct 613091 GTTC--TGAATCTCGGCGTTCTTTGAAATCTGGTCGATGGAAGCATCGCGCACATTGAGA 613034
Query 169346 CACTTCCCACGAAGAGGGAAGACACC 169371
||| || ||||| |||||||||||
Sbjct 613033 ATCTTACCCCGAAGTGGGAAGACACC 613008
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 583258299269320
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |