Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Dothistroma_20septosporum_20[genbank_20GCA_5F002236485.1_202017-07-
28] 343 sequences; 30,616,651 total letters
Query= NC_031038.1
Length=222832
Score E
Sequences producing significant alignments: (Bits) Value
seq87 140 5e-28
seq198 131 2e-25
>seq87
Length=565143
Score = 140 bits (154), Expect = 5e-28
Identities = 462/715 (65%), Gaps = 10/715 (1%)
Strand=Plus/Minus
Query 76523 AATTCATCTCCCCAAACATCATCCAAACCAGGACATTCATTCGGACACATCAATGACCAC 76582
|| || || || ||||||| || |||||| ||||| || || ||||||| | |||
Sbjct 64729 AACTCGTCACCGTAAACATCCGACAGACCAGGGCATTCGTTGGGGCACATCAGAGTCCAA 64670
Query 76583 TCACCATCTTCCTTAACCCGTTTCATAAAGAGATCAGGTATCCATAGAGCAATAAATAGA 76642
|| | | | || || | |||||||||||| || ||||| ||||| || | |
Sbjct 64669 GTGCCGTTCTGTTCGACACGCTGCATAAAGAGATCGGGAATCCAGAGAGCGTAGAACAAA 64610
Query 76643 TCTCGGGTTCTACGTTCTTCATTTCCTGTATTCTTTTTAAGATCTAGGAACTCCATAATA 76702
|| || | | | |||||| ||||| ||||| ||| || | ||||| ||| |
Sbjct 64609 TCGCGCGCACGAACTTCTTCCTTTCCATGGTTCTTGCGAAGGTCCATGAACTGCATGACG 64550
Query 76703 TCAGAATGCCATGGTTCTAGATATATCGCCATAACACCCGGTCGTTTATTACCTCCCTGA 76762
|| | |||||| || || || || || || | | |||| || || || || || |||||
Sbjct 64549 TCTGCATGCCACGGCTCAAGGTAGATGGCAAAAGCACCTGGACGCTTGTTGCCACCCTGG 64490
Query 76763 TCTATATATCTGGCAGTGTTATTATAAACTCTCAACATTGGAATAATGCCGTTAGATGTA 76822
|| | || | |||||||| ||||| |||| | |||||| | || ||||| |||||
Sbjct 64489 TCAACGTAACGAGCAGTGTTGTTATAGACTCGTAGCATTGGTACAAGACCGTTGGATGTG 64430
Query 76823 CCATTTGTTCCAGAAATATAACTTCCACATGCACGAATATTACTAATAGATAGGCCTATT 76882
|| ||||| || ||| || || || | || || || | || || ||
Sbjct 64429 CCGTTTGTGCCGCCAATGTATGAGCCTGTGGCCCTGATGTTGTGAACATGAAGACCAATA 64370
Query 76883 CCTCCTGCCATTTTAGAGATTAGAGCACAGCGTTTCAATGTGTCATAGATGCCCTCTATA 76942
|| || || | || ||||| | ||||| || | || || ||||| || || ||
Sbjct 64369 CCGCCAGCGTTCTTGGAGATCATGGCACATATCTTGAGGGTATCGTAGATACCATCAATG 64310
Query 76943 CTATCATCCATCATG----TTAAGAAGAAAACAGCTAGACATTTGATGATGAACAGTTCC 76998
|| |||||| ||||| |||||| | ||||| || || || ||
Sbjct 64309 CTGTCATCCTTCATGGCCACCAAGAAGCAGGATGCTAG----CTGCGCCTGTGGGGTACC 64254
Query 76999 TGCATTAAACAATGTAGGAGATGCATGAGTGAACCATTTTTCAGA-AAGTAGATTGTATG 77057
||| | || | ||| || || ||||| ||||| | || || | |||| |||||||
Sbjct 64253 AGCACTGAAAAGTGTTGGCGAAGCATGTGTGAAGTACTTCAACGACATGTAG-TTGTATG 64195
Query 77058 TTTCAATAACTGCTTCTATATCCCATTGATGAATTCCTACAGCGACACGCATCAACATAT 77117
| ||||| ||||||| || || |||||| || ||||| |||||||| | ||| |
Sbjct 64194 TCTCAATCGCTGCTTCAATGTCTTCCCCATGAATGCCGACAGCCACACGCATGATCATCT 64135
Query 77118 GCTGAGGTCGTTCTACAGTCTTATTATTTATTTTCAACAAGTATGATTTTTCCAAAGTTT 77177
| || |||| || || ||| | ||| | | | ||||||| |||| ||| |
Sbjct 64134 GTTGCGGTCTCTCGGCAACCTTGCCGTCAATTCTGAGAAGGTATGATCGCTCCAGAGTCT 64075
Query 77178 TAAAACCAAAATAGTTGTATGAAAAGTCTCTTTCGTAAATAATAACCGAATTTAG 77232
| || || || || | ||| ||||| | || || | ||| |||| || ||
Sbjct 64074 TGAAGCCGAAGTACTGGTAGTTGAAGTCGCGGTCATAGACAATGGCCGAGTTCAG 64020
>seq198
Length=423218
Score = 131 bits (144), Expect = 2e-25
Identities = 343/517 (66%), Gaps = 10/517 (2%)
Strand=Plus/Plus
Query 46672 TCGTTAGAAAATGTGAGCCCAGGCATTAGTCCACGCTTTTTGAGCCAAAATATAGCCGCG 46731
||||| || ||||||||||| | ||| || ||||| || || ||||| || ||||| ||
Sbjct 264653 TCGTTCGAGAATGTGAGCCCGGCCATGAGACCACGTTTCTTCAGCCAGAAGATAGCAGCA 264712
Query 46732 AAAGATCCAGAAAAGAATATGCCTTCTACAGCCGCGAATGCGACAAGTCTCTCTCCGTAA 46791
||||||||||| ||||| || || || || || || ||||| | || | || |
Sbjct 264713 AAAGATCCAGAGAAGAAGATACCCTCAACGGCGGCAAATGCAATGAGACGGAGGGCGAAT 264772
Query 46792 CTGGCATCATTATGA---ATCCACCTTTGAGCCCAATCAGCCTTTTTCTTTACACAAGGC 46848
| | | || | | ||||| | ||||| |||||||| | | || ||
Sbjct 264773 GTCGAGTTCTTGTCAGAAATCCATCGCAACGCCCAGTCAGCCTTCCTGCGGATGCATGGG 264832
Query 46849 ATTGTTTCTATAGCATTAAAGAGAAAGtttttttCATCACTATCTTTAACATATGTATCT 46908
|| | || || ||||| || || | || | | || | | ||||||||
Sbjct 264833 ATGTTGTCGATGGCATTGAACAGGTATGTTCGCTGCTTTGGCTCGCTGATGTATGTATCG 264892
Query 46909 ATTAAAAGACTATACATTTCTGAATGAATGTTTTCAATAGCCATCTGAAATCCGTAAAAA 46968
|| | ||| ||| | || || || ||||| || || ||||| || ||||| ||
Sbjct 264893 ATGAGAAGGGAATATGTCTCGGAGTGGATGTTCTCCATCATGATCTGGAAGCCGTAGAAG 264952
Query 46969 CATCTTGCTTCAGTAATCTGTACCTCTGTACAAAATCGTTCAGACAAA-TTCTCATTCAC 47027
|||| ||| || | ||||| ||||| | | || || || ||| | ||||| || ||
Sbjct 264953 CATCGTGCCTCCGGGATCTGCACCTCAGAGCTGAAGCGCTC-GACGAGGTTCTCGTTGAC 265011
Query 47028 TATTCCATCACTAGCAGCAAAAAATGCCAATACATGTTTAATAAAATATTTTTCATCG-- 47085
|| ||||| || || || ||||| | || ||| || || || ||| |||
Sbjct 265012 AATGCCATCGGATGCGGCGAAGAATGCGAGGACGTGTGAGATGAAGAATCGTTCGTCGTC 265071
Query 47086 GT--AGTCAGTTTATTCCAGTCATTGATATCTTTTGATATATCTACTTCTTCAGCTGTCC 47143
|| |||| | || |||||||| | || ||| || || | ||| | || ||||||||||
Sbjct 265072 GTTGAGTC-GCTTGTTCCAGTCGTGGAGATCCTTCGACAGATCAATCTCCTCAGCTGTCC 265130
Query 47144 AGAATGACGCCTCTGCTTTTTTATACATATTCCATAT 47180
||||||| ||||| || ||||| ||||| | ||||||
Sbjct 265131 AGAATGAGGCCTCGGCCTTTTTGTACATTTGCCATAT 265167
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 712931343293760
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |