Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Dothistroma_20septosporum_20[genbank_20GCA_5F002236485.1_202017-07- 28] 343 sequences; 30,616,651 total letters Query= NC_033775.1 Length=376207 Score E Sequences producing significant alignments: (Bits) Value seq33 163 7e-35 seq332 122 2e-22 >seq33 Length=763136 Score = 163 bits (180), Expect = 7e-35 Identities = 160/205 (78%), Gaps = 1/205 (0%) Strand=Plus/Plus Query 177924 CAAATTTTCGTGAAAACTCTCACAGGAAAAACGATCACCCTCGAGGTGGAAAGCTCAGAC 177983 ||||||||||| || || ||||| || || || ||||| ||||| |||||| || ||| Sbjct 708528 CAAATTTTCGTCAAGACACTCACCGGCAAGACCATCACACTCGAAGTGGAATCATCCGAC 708587 Query 177984 ACCATCGAGAACGTCAAACAAAAGATTCAGGACAAAGAAGGAATCCCTCCGGACCAGCAA 178043 || ||||| |||||||| |||||| || ||||| || || ||||| ||||||||||| Sbjct 708588 ACGATCGACAACGTCAAGTCAAAGATCCAAGACAAGGAGGGCATCCCACCGGACCAGCAG 708647 Query 178044 CGACTTATCTTCGCCGGAAAACAGCTCGAAGATGGAAGGACTCTTGCCGATTATAACGTC 178103 || || ||||||||||| || ||||| || || || |||| ||| | ||||| ||| || Sbjct 708648 CGTCTCATCTTCGCCGGCAAGCAGCTTGAGGACGGCCGGACACTTTCGGATTACAACATC 708707 Query 178104 CAAAAAGAATCAACACTGCATCTTG 178128 || || || || || ||||| |||| Sbjct 708708 CAGAAGGAGTCCACTCTGCA-CTTG 708731 Score = 141 bits (156), Expect = 2e-28 Identities = 155/205 (76%), Gaps = 1/205 (0%) Strand=Plus/Plus Query 177924 CAAATTTTCGTGAAAACTCTCACAGGAAAAACGATCACCCTCGAGGTGGAAAGCTCAGAC 177983 || || ||||| || |||||||| || || || |||||||||||||| || | ||| Sbjct 708300 CAGATCTTCGTCAAGACTCTCACCGGCAAGACCATCACCCTCGAGGTCGAGTCCAGCGAC 708359 Query 177984 ACCATCGAGAACGTCAAACAAAAGATTCAGGACAAAGAAGGAATCCCTCCGGACCAGCAA 178043 |||||||| || ||||| ||||| |||||||| || || ||||| || |||||||| Sbjct 708360 ACCATCGACAATGTCAAGTCGAAGATCCAGGACAAGGAGGGTATCCCACCTGACCAGCAG 708419 Query 178044 CGACTTATCTTCGCCGGAAAACAGCTCGAAGATGGAAGGACTCTTGCCGATTATAACGTC 178103 || || || || || || || |||||||| ||||| | ||||| | || || ||| || Sbjct 708420 CGCCTGATTTTTGCAGGCAAGCAGCTCGAGGATGGTCGTACTCTGTCGGACTACAACATC 708479 Query 178104 CAAAAAGAATCAACACTGCATCTTG 178128 || |||||||| || || || |||| Sbjct 708480 CAGAAAGAATCGACTCTCCA-CTTG 708503 Score = 98.7 bits (108), Expect = 2e-15 Identities = 134/187 (72%), Gaps = 0/187 (0%) Strand=Plus/Plus Query 177943 TCACAGGAAAAACGATCACCCTCGAGGTGGAAAGCTCAGACACCATCGAGAACGTCAAAC 178002 |||| || || || || ||||||||||| || || ||||||||||| || || || Sbjct 708091 TCACCGGCAAGACCATTACCCTCGAGGTTGAGTCGTCCGACACCATCGACAATGTGAAGA 708150 Query 178003 AAAAGATTCAGGACAAAGAAGGAATCCCTCCGGACCAGCAACGACTTATCTTCGCCGGAA 178062 ||||| ||||| || ||||| || || || ||||||||||| | || ||||| || | Sbjct 708151 GCAAGATCCAGGATAAGGAAGGCATTCCACCTGACCAGCAACGCTTGATTTTCGCAGGCA 708210 Query 178063 AACAGCTCGAAGATGGAAGGACTCTTGCCGATTATAACGTCCAAAAAGAATCAACACTGC 178122 | |||||||| || || | || || |||| || ||| | || || || || || | Sbjct 708211 AGCAGCTCGAGGACGGTCGCACCCTGTCCGACTACAACATTCAGAAGGAGAGCACTCTCC 708270 Query 178123 ATCTTGT 178129 |||| || Sbjct 708271 ATCTCGT 708277 >seq332 Length=871922 Score = 122 bits (134), Expect = 2e-22 Identities = 137/182 (75%), Gaps = 6/182 (3%) Strand=Plus/Plus Query 177930 TTCGTGAAAACTCTCACAGGAAAAACGATCACCCTCGAGGTGGAA---AGCTCAGACACC 177986 ||||| || || ||||| || || || ||||| |||||||| || ||| |||||| Sbjct 250578 TTCGTAAAGACCCTCACTGGCAAGACCATCACGCTCGAGGTCGAGTCGAGC---GACACC 250634 Query 177987 ATCGAGAACGTCAAACAAAAGATTCAGGACAAAGAAGGAATCCCTCCGGACCAGCAACGA 178046 ||||| || ||||| ||||| |||||||| || |||||||| ||||||||||| || Sbjct 250635 ATCGACAATGTCAAGAGCAAGATCCAGGACAAGGAGGGAATCCCACCGGACCAGCAGCGT 250694 Query 178047 CTTATCTTCGCCGGAAAACAGCTCGAAGATGGAAGGACTCTTGCCGATTATAACGTCCAA 178106 | |||||||| ||||| ||| | || ||||| | || || |||| || ||| |||| Sbjct 250695 TTGATCTTCGCTGGAAAGCAGTTGGAGGATGGTCGCACCCTCTCCGACTACAACATCCAG 250754 Query 178107 AA 178108 || Sbjct 250755 AA 250756 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1203725909977542