Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Dothistroma_20septosporum_20[genbank_20GCA_5F002236515.1_202017-07- 28] 141 sequences; 30,033,957 total letters Query= NC_003494.1 Length=111362 Score E Sequences producing significant alignments: (Bits) Value seq55 93.3 3e-14 >seq55 Length=2050790 Score = 93.3 bits (102), Expect = 3e-14 Identities = 274/420 (65%), Gaps = 2/420 (0%) Strand=Plus/Minus Query 22741 CGTCTCTTGGCCTTTGCGGCTGTTGAAGGCGTCATGTTTTCTGGGTCATTTGCGGCCATA 22800 |||||| | || ||||| || ||||| || || | || ||||| || ||||| || || Sbjct 265562 CGTCTCATTGCATTTGCCGCCGTTGAGGGTATCTTCTTCTCTGGATCTTTTGCTGCTATC 265503 Query 22801 TTCTGGCTGAAGAAACGTTCGCTCATGCCAGGGTTGGCGTTTTCCAACGAGTTGATTAGC 22860 |||||||||||||||||| |||||| | ||| | | || || |||||| | || | Sbjct 265502 TTCTGGCTGAAGAAACGTGGTCTCATGGCCGGGCTCACATTCTCGAACGAGCTCATCTCC 265443 Query 22861 CGTGACGAAGGTCTACACTGTGACTTTGCTTGTATGCTGTTTAGGCAAATGGCAAACAAA 22920 ||||| || || | ||| ||||| || || | ||||| ||| || ||||| Sbjct 265442 CGTGATGAGGGCATGCACACAGACTTCGCCTGCCTTCTGTTCTCGCATCTGAAGAACAAG 265383 Query 22921 CCGTGTCAGGACGATGCACATCAAATCATATCTGATGCCGTTGACATTGAGACGGCTTTC 22980 ||| |||| | || || ||||| | || ||||| || ||| || ||| Sbjct 265382 CCGAACCAGGCCCTTGTGCAGAGCATCATCACCGAGGCCGTCACGATCGAGCAGGAGTTC 265323 Query 22981 TTCCAAGAGGCAC-TAAAGACACCCCTACTTGGTATGAATAGTGACAGTATGAGACTGTA 23039 || ||| || | | | || || || || ||||| |||| ||| || || Sbjct 265322 TTGACAGACGCTCTTCCATGCA-AGCTTCTGGGGATGAACGCTGACCTCATGTCACAATA 265264 Query 23040 CATACAGTTTGTTGCAGATCGCCTGCTCGATGCCCTGGGTTATGCAAAGATGTATAACGT 23099 ||| | || || || |||||||| || || || || | ||| | || |||| Sbjct 265263 CATTGAATTCGTCGCCGATCGCCTACTGTTGGCACTCGGCAACAAGAAGTTCTACAACGC 265204 Query 23100 TGCCAATCCATTTGATTTCATGGATAACATTAGCATTGAAGGTAAAACAAACTTCTTTGA 23159 |||| || || || |||||||| |||||| | | || || || |||||||| || Sbjct 265203 CACCAACCCCTTCGACTTCATGGAGAACATTTCGCTGGGCGGCAAGACCAACTTCTTCGA 265144 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 356232987834823