Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Dothistroma_20septosporum_20[genbank_20GCA_5F002236515.1_202017-07-
28] 141 sequences; 30,033,957 total letters
Query= NC_003663.2
Length=224499
Score E
Sequences producing significant alignments: (Bits) Value
seq80 165 1e-35
>seq80
Length=246247
Score = 165 bits (182), Expect = 1e-35
Identities = 475/723 (66%), Gaps = 12/723 (2%)
Strand=Plus/Plus
Query 79863 GAACTCGTCTCCCCAAACATCGTCTAATCCAGGACATTCGTCAGGACACATCAACGACCA 79922
||||||||| || ||||||| | ||||| ||||||| || ||||||| | |||
Sbjct 192246 GAACTCGTCACCGTAAACATCCGACAGACCAGGGCATTCGTTGGGGCACATCAGAGTCCA 192305
Query 79923 CTCTCCATCATCCTTTACTCGTTTCATAAAGAGATCAGGAATCCAAAGAGCTATAAATAG 79982
|| | | | || || | |||||||||||| |||||||| ||||| || |
Sbjct 192306 AGTGCCGTTCTGTTCGACACGCTGCATAAAGAGATCGGGAATCCAGAGAGCGTAGAACAA 192365
Query 79983 ATCTCTGGTTCTATGCTCCTCGTTTCCTGTATTCTTTTTAAGATCGAGGAACGCCATAAT 80042
||| | | | | || || ||||| ||||| ||| || | |||| ||| |
Sbjct 192366 ATCGCGCGCACGAACTTCTTCCTTTCCATGGTTCTTGCGAAGGTCCATGAACTGCATGAC 192425
Query 80043 ATCAGAATGCCACGGTTCCAAGTATATGGCCATAACTCCCGGTCGTTTGTTTCCTCCCTG 80102
|| | ||||||||| || | ||| ||||| | | | || || || ||||| || |||||
Sbjct 192426 GTCTGCATGCCACGGCTCAAGGTAGATGGCAAAAGCACCTGGACGCTTGTTGCCACCCTG 192485
Query 80103 ATCTATGTATCTAGCGGTGTTATTATAAACTCTCAACATTGGAATAATACCATTGGATGT 80162
|| | ||| | ||| ||||| ||||| |||| | |||||| | || ||| ||||||||
Sbjct 192486 GTCAACGTAACGAGCAGTGTTGTTATAGACTCGTAGCATTGGTACAAGACCGTTGGATGT 192545
Query 80163 ACCATTGGTCCCGGAGATATAGCTTCCACTGGCACGAATATTACTAA-TTGATAGACCTA 80221
|| || || ||| || || || |||| | || || || ||| ||||| |
Sbjct 192546 GCCGTTTGTGCCGCCAATGTATGAGCCTGTGGCCCTGATGTTGTGAACATGA-AGACCAA 192604
Query 80222 TTCCCCCTGCCATTTTAGAGATTAATGCGCATCGTTTTAACGTATCATAGATGCCCTCTA 80281
| || || || | || ||||| | || ||| || | ||||| ||||| || || |
Sbjct 192605 TACCGCCAGCGTTCTTGGAGATCATGGCACATATCTTGAGGGTATCGTAGATACCATCAA 192664
Query 80282 TGCTATCATCAATCATGTTAAGTAGAAAACAGCTAGACATTTGGTGACGACT----AGTT 80337
|||| ||||| ||||| | | || ||| || | | || || || ||
Sbjct 192665 TGCTGTCATCCTTCATGGCCACCAAGAAGCAG---GATGCTAGCTG-CGCCTGTGGGGTA 192720
Query 80338 CCCGCATTAAATAAGGTAGGAGAAGCGTGCGTAAACCATTTTTCAGACA-GTAGATTGTA 80396
|| ||| | || | || || ||||| || || || | || |||| |||| |||||
Sbjct 192721 CCAGCACTGAAAAGTGTTGGCGAAGCATGTGTGAAGTACTTCAACGACATGTAG-TTGTA 192779
Query 80397 CGTCTCAATAGCTGATTCTATATCCCATTGATGAATTCCTACCGCGACACGCATTAACAT 80456
|||||||| |||| ||| || || |||||| || || || |||||||| | |||
Sbjct 192780 TGTCTCAATCGCTGCTTCAATGTCTTCCCCATGAATGCCGACAGCCACACGCATGATCAT 192839
Query 80457 GTGCTGAGGTCTTTCAACGATCTTGTTATTTATTTTCAACAAGTAAGATTTTTCCAAAGT 80516
|| || ||||| || | | |||| | ||| | | | ||| ||| |||| |||
Sbjct 192840 CTGTTGCGGTCTCTCGGCAACCTTGCCGTCAATTCTGAGAAGGTATGATCGCTCCAGAGT 192899
Query 80517 TTTAAAACCAAAATAGTTGTATGAAAAGTCTCGTTCGTAAATAATAACCGAGTTGAGTTT 80576
|| || || || || | ||| ||||| || || || | ||| ||||||| || |
Sbjct 192900 CTTGAAGCCGAAGTACTGGTAGTTGAAGTCGCGGTCATAGACAATGGCCGAGTTCAGCTC 192959
Query 80577 ATC 80579
|||
Sbjct 192960 ATC 192962
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 718267534051240
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |