Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Dothistroma_20septosporum_20[genbank_20GCA_5F002236515.1_202017-07-
28] 141 sequences; 30,033,957 total letters
Query= NC_004105.1
Length=209771
Score E
Sequences producing significant alignments: (Bits) Value
seq80 150 2e-31
>seq80
Length=246247
Score = 150 bits (166), Expect = 2e-31
Identities = 732/1150 (64%), Gaps = 22/1150 (2%)
Strand=Plus/Plus
Query 71698 GCAACAGATGCCAGATTACAAACGGCTACCTCATTAGCATCGGCATATTGTATAATTTCA 71757
|||| || |||||||| || || || ||||||| | | | | || | || || |||
Sbjct 191998 GCAAGCGAAGCCAGATTGCAGACAGCGACCTCATCTGGAGCAGAGTACTCCATGATCTCA 192057
Query 71758 GTGCAAAGATTACTACACTTGATGGTTCCTAAATTTTGTTGATTACTCTTTTTGTTACAC 71817
||||| | |||| | ||||||||| || | ||| | || || ||||| |||
Sbjct 192058 GTGCACAAATTAGAGCTCTTGATGGTGCCAAGATTCTTCTGGTTGCTCTTGCGGTTGGCG 192117
Query 71818 GCATCCTTATAAAGAATAAACGGAGTACCAGTTTCAATCTGAGATTCTATAATCGCTTTC 71877
|| ||||| || ||||| || || || || || || |||| | || | ||| || | |
Sbjct 192118 GCGTCCTTGTACAGAATGAAAGGTGTGCCGGTCTCGGTCTGCGCCTCGAGAATAGCATAC 192177
Query 71878 CAGACGACTCGAGCCTTTATTATATTCTTGTATCTCTT---TTCTCTTTCGTATTGTGTA 71934
|| | |||| | | | | | ||| |||||| || || |
Sbjct 192178 CATATTTTCTGAGCACGAACCGTCTCACGG---CCCTTGCCTTCTCTCTCATAACGCTCG 192234
Query 71935 TATAA-TCGTTCGAACTCGTCTCCCCAAGCATTGTCTAATCCAGGACATTCATTCGGACA 71993
|| | || || ||||||||| || || ||| | ||||| ||||| || || ||
Sbjct 192235 TACAGCTCCTT-GAACTCGTCACCGTAAACATCCGACAGACCAGGGCATTCGTTGGGGCA 192293
Query 71994 CATCAATGACCACTCTCCATCATCATTTACTCGTTTCATAAAGAGATCAGGAATCCAAAG 72053
||||| | ||| || | | | || || | |||||||||||| |||||||| ||
Sbjct 192294 CATCAGAGTCCAAGTGCCGTTCTGTTCGACACGCTGCATAAAGAGATCGGGAATCCAGAG 192353
Query 72054 AGCTATAAATAGATCTCTGGTTCTATGCTCCTCGTTTCCTGTATTCTTTTTAAGATCGAG 72113
||| || | ||| | | | | || || ||||| ||||| ||| || |
Sbjct 192354 AGCGTAGAACAAATCGCGCGCACGAACTTCTTCCTTTCCATGGTTCTTGCGAAGGTCCAT 192413
Query 72114 GAACGCCATAATATCAGAATGCCACGGTTCCAAGTATATGGCCATAACTCCCGGCCGTTT 72173
|||| ||| | || | ||||||||| || | ||| ||||| | | | || || || ||
Sbjct 192414 GAACTGCATGACGTCTGCATGCCACGGCTCAAGGTAGATGGCAAAAGCACCTGGACGCTT 192473
Query 72174 GTTTCCTCCCTGATCTATGTATCTAGCGGTGTTATTATAAACTCTCAACATTGGAATAAT 72233
||| || ||||| || | ||| | ||| ||||| ||||| |||| | |||||| | ||
Sbjct 192474 GTTGCCACCCTGGTCAACGTAACGAGCAGTGTTGTTATAGACTCGTAGCATTGGTACAAG 192533
Query 72234 ACCATTGGATGCACCATTGGTCCCGGAGATATAGCTTCCACTGGCACGAATATTGCTAA- 72292
||| ||||||| || || || ||| || || || |||| | || ||| ||
Sbjct 192534 ACCGTTGGATGTGCCGTTTGTGCCGCCAATGTATGAGCCTGTGGCCCTGATGTTGTGAAC 192593
Query 72293 TTGATAGACCTATTCCCCCTGCCATTTTAGAGATTAATGCGCATCGTTTTAACGTATCAT 72352
||| ||||| || || || || | || ||||| | || ||| || | ||||| |
Sbjct 192594 ATGA-AGACCAATACCGCCAGCGTTCTTGGAGATCATGGCACATATCTTGAGGGTATCGT 192652
Query 72353 AGATGCCCTCTATACTATCATCCATCATGTTAAGTAGAAAACAGCTAGACATTTGGTGAC 72412
|||| || || || || |||||| ||||| | | || ||| || | | || |
Sbjct 192653 AGATACCATCAATGCTGTCATCCTTCATGGCCACCAAGAAGCAG---GATGCTAGCTG-C 192708
Query 72413 GACT----AGTTCCCGCATTAAATAAGGTAGGAGAAGCGTGCGTAAACCATTTTTCAGAC 72468
| || || || ||| | || | || || ||||| || || || | || |||
Sbjct 192709 GCCTGTGGGGTACCAGCACTGAAAAGTGTTGGCGAAGCATGTGTGAAGTACTTCAACGAC 192768
Query 72469 A-GTAGATTGTACGTCTCAATAGCTGATTCTATATCCCATTGATGTATTCCTACCGCGAC 72527
| |||| ||||| |||||||| |||| ||| || || ||| || || || || ||
Sbjct 192769 ATGTAG-TTGTATGTCTCAATCGCTGCTTCAATGTCTTCCCCATGAATGCCGACAGCCAC 192827
Query 72528 ACGCATTAACATATGCTGAGGTCTTTCAACGATCTTGTTATTTATTTTCAACAAGTAGGA 72587
|||||| | ||| || || ||||| || | | |||| | ||| | | | ||| ||
Sbjct 192828 ACGCATGATCATCTGTTGCGGTCTCTCGGCAACCTTGCCGTCAATTCTGAGAAGGTATGA 192887
Query 72588 TTTTTCCAAAGTTTTAAAACCAAAATAGTTGTATGAAAAGTCTCGTTCGTAAATAATAAC 72647
| |||| ||| || || || || || | ||| ||||| || || || | ||| |
Sbjct 192888 TCGCTCCAGAGTCTTGAAGCCGAAGTACTGGTAGTTGAAGTCGCGGTCATAGACAATGGC 192947
Query 72648 CGAATTGAGTTTATCCTTATATTTGTTAACTATATCCATGGTGATACT-TGAAATAATCG 72706
||| || || | ||| | || | || | | || | || ||| || || |
Sbjct 192948 CGAGTTCAGCTCATCTGAGTGCTTCATGACGGTCGCGTACGT-CTCCTCTGAGATCATGG 193006
Query 72707 GAGAATGTTTCCCATTTTTAGGATTAACATAGTTGAATAAATCCTCCATCACTTCACTAA 72766
||| | || || | || ||||| | || | ||| ||||| | || || |
Sbjct 193007 GAGCCTTCTTGCCCGTCTTTGGATTGATGTATGCGTATAGATCCTGGACAACAGCAGAGA 193066
Query 72767 ATAGtttttttGTTTCCTTGTGTAGATTTGATACGGCTATTCTGGCGGCTAGAATGGCAT 72826
|| | || || || | |||||| || || || ||||| || | ||||| || || ||||
Sbjct 193067 ATTGCTTCTTGGTCTGCTTGTGGAGGTTGGACACGGCGATACGCGCGGCGAGGATCGCAT 193126
Query 72827 AATCTGGATG 72836
||||||| ||
Sbjct 193127 AATCTGGGTG 193136
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 671138017117160
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |