Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Dothistroma_20septosporum_20[genbank_20GCA_5F002236515.1_202017-07-
28] 141 sequences; 30,033,957 total letters
Query= NC_009127.1
Length=295146
Score E
Sequences producing significant alignments: (Bits) Value
seq55 295 1e-74
seq80 190 4e-43
seq141 87.8 3e-12
>seq55
Length=2050790
Score = 295 bits (326), Expect = 1e-74
Identities = 584/854 (68%), Gaps = 34/854 (4%)
Strand=Plus/Minus
Query 42309 ATGTACAAGAAGGCGCAGTTCTCCAACTGGACCGCCGAGGAGATTGACCTGGCCAAGGA- 42367
|||||||| ||||| || ||| |||||| || ||||||||||| ||| | |||||
Sbjct 265958 ATGTACAAAAAGGCCGAGGCCTCATTCTGGACAGCTGAGGAGATTGATCTGTCGAAGGAT 265899
Query 42368 ---CACGGCCGGCT---GGGAGTCACTGTCTGAGAACGAAAAGTTTTTCCTCAAAAACAT 42421
|||| | || | || ||| | | |||||| || ||| || | || |
Sbjct 265898 CTCCACGACTGGAACAAGCGACTCAACGACGACGAACGA----TTCTTCATCTCACACGT 265843
Query 42422 ACTGGCCTTCTTCGCCGCCTCTGACGGCATAGTCAATGAGAACCTGGCCACCAGGTTCAT 42481
|| || ||||||||||| || || ||||| ||||| |||||||| | | | ||||
Sbjct 265842 CCTCGCATTCTTCGCCGCATCCGATGGCATTGTCAACGAGAACCTCGTCGAGCGCTTCAG 265783
Query 42482 GAAAGAGGTGCAGTACTTTGAGGCGCGCTGCTTCTACGGCTTCCAGATAGCCATAGAGAA 42541
||||||||| | ||||| || |||||||||||||||||||| || |||||
Sbjct 265782 CTCTGAGGTGCAGATCCCGGAGGCACGATGCTTCTACGGCTTCCAGATCATGATGGAGAA 265723
Query 42542 CGTGCACTCTGAGGTGTACGCCAAACTGCTCAACACGTACATCCTGGATCCCGTCGAGCG 42601
| | ||||| ||| || || || || | || |||||| || || ||||
Sbjct 265722 CATCCACTCCGAGACATATTCCCTTCTCATCGATACATACATCAGCGAGCCAAAGCAGCG 265663
Query 42602 TAACGGGCTGTTCAAGGCCATGGAGACGATGCCCTGCATCAAGAAGAAGGCGGACTGGGC 42661
| |||||||| ||||| || | || || |||||| | |||||| ||||||||
Sbjct 265662 AACATACCTGTTCAATGCCATCGACAACATCCCATGCATCCGCAGGAAGGCTGACTGGGC 265603
Query 42662 GCTCAACTGGATCGAGAGTCCCGA-CGCAACGTTCGGCGAGAGGCTGGTAGCCTTTACCG 42720
| | ||||| | | || | | || |||| | | || | || ||| |||
Sbjct 265602 GTTGCGATGGATTTCT-GACAAGAACTCGACATTCGCCCTCCGTCTCATTGCATTTGCCG 265544
Query 42721 CCGTCGAGGGCATCTTCTTCTCGGGCGCCTTCGCCTCCATCTTCTGGCTCAAGCAGAA-G 42779
|||| ||||| ||||||||||| || | || || | ||||||||||| ||| | |
Sbjct 265543 CCGTTGAGGGTATCTTCTTCTCTGGATCTTTTGCTGCTATCTTCTGGCTGAAGAAACGTG 265484
Query 42780 GTGTCGATGCCCGGACTCACCTTCTCGAACGAACTCATCAGCAGGGACGAGGGGCTGCAT 42839
|| || ||| |||| ||||| ||||||||||| |||||| | | || ||||| ||||
Sbjct 265483 GTCTC-ATGGCCGGGCTCACATTCTCGAACGAGCTCATCTCCCGTGATGAGGGCATGCAC 265425
Query 42840 AGGGACTTTGCCTGCCTCCTGTTCTCGAGCCACCTCAGGCACAAGCCCTCGAAGGAGCGG 42899
| ||||| |||||||| ||||||||| || || | | ||||||| ||| |
Sbjct 265424 ACAGACTTCGCCTGCCTTCTGTTCTCG---CATCTGAAGAACAAGCCGAACCAGGCCCTT 265368
Query 42900 GTCCGGGCCATCATCACGGAGGCCGTGGAGATCGAGAAGGAGTTCCTCACGCAGTCGCTG 42959
|| | | ||||||||| |||||||| ||||||| |||||||| | || || ||||
Sbjct 265367 GTGCAGAGCATCATCACCGAGGCCGTCACGATCGAGCAGGAGTTCTTGAC--AGACGCTC 265310
Query 42960 C-CCGTGTCC-CTGGTCGGCATGAACCACGACCTCATGTGCAAGTACATCCAGTACGTCG 43017
|| || || | || |||||| |||||||||| | ||||| | | |||||
Sbjct 265309 TTCCATGCAAGCTTCTGGGGATGAACGCTGACCTCATGTCACAATACATTGAATTCGTCG 265250
Query 43018 CCGACCATCTCCTGTGCCAGATGGGTCTCAGCCGCC------TCTACAACACGCCGTGCC 43071
|||| | || |||| ||| ||| || | |||||||| | | ||
Sbjct 265249 CCGATCGCCTACTGT------TGGCACTCGGCAACAAGAAGTTCTACAACGCCACCAACC 265196
Query 43072 CCTTCGACTTTATGGAGAACATCTCGTTGGAGGGCAAGACCAACTTTTTCGAGAAGCGCG 43131
|||||||||| ||||||||||| ||| ||| |||||||||||||| ||||||||||| |
Sbjct 265195 CCTTCGACTTCATGGAGAACATTTCGCTGGGCGGCAAGACCAACTTCTTCGAGAAGCGTG 265136
Query 43132 TCGCCGACTACCAG 43145
| | ||| ||||||
Sbjct 265135 TTGGCGAGTACCAG 265122
>seq80
Length=246247
Score = 190 bits (210), Expect = 4e-43
Identities = 479/722 (66%), Gaps = 21/722 (3%)
Strand=Plus/Plus
Query 244688 GCCAGGTTGCAGACGGCCACCTCCTCCGAGTTGGTGTACTGGACAATCTCGGTGCAGAGG 244747
||||| |||||||| || ||||| || | | ||||| | ||||| ||||| |
Sbjct 192007 GCCAGATTGCAGACAGCGACCTCATCTGGAGCAGAGTACTCCATGATCTCAGTGCACAAA 192066
Query 244748 TTACTGCACTTGATGGTGCCCAGGTGCTGGTGATTGGACTTGGCGTTGCAGGCGTCCTTG 244807
||| || |||||||||||| || | || || ||| |||| |||| ||||||||||
Sbjct 192067 TTAGAGCTCTTGATGGTGCCAAGATTCTTCTGGTTGCTCTTGCGGTTGGCGGCGTCCTTG 192126
Query 244808 TAGAGCATGAAGGGCCCCCCGGTCTCGAGCTGGGCGACGAGGACGCTGTTCCAGAGGTCC 244867
|| || ||||| || ||||||||| ||| || |||| | | ||| | | |
Sbjct 192127 TACAGAATGAAAGGTGTGCCGGTCTCGGTCTGCGCCTCGAGAATAGCATACCATATTTTC 192186
Query 244868 CTAGCCTTGACCGTCCTGCGAGCCTTGCCCTCTGCCTCGTAGCGGGTGTACAGGGCCTCG 244927
||| |||||| || ||||||| ||| ||| || || |||||| ||| |
Sbjct 192187 TGAGCACGAACCGTCTCACGGCCCTTGCCTTCTCTCTCATAACGCTCGTACAGCTCCTTG 192246
Query 244928 AACTCGGGGCCCCAGACCTCGTCTAGGCCGGGGCA--CGACGCCGGGCACATGAGACTCC 244985
|||||| || | || || || || ||||| || | |||||||| ||| |||
Sbjct 192247 AACTCGTCACCGTAAACATCCGACAGACCAGGGCATTCGTTG--GGGCACATCAGAGTCC 192304
Query 244986 ACTCGCCGCCGTCCTTGACCCTCTGCATGAAGAGGTCGGGGATCCAGAGGGCCTGGAAGA 245045
| |||| | | ||| | |||||| ||||| ||||| |||||||| || | ||| |
Sbjct 192305 AAGTGCCGTTCTGTTCGACACGCTGCATAAAGAGATCGGGAATCCAGAGAGCGTAGAACA 192364
Query 245046 GGTCCCTGGTCCTCTGCTCGTCCGAGCCAGTGTTCTTCCTCAGCTCCAAAAAGTCAAAGA 245105
|| | | | || ||| ||| |||||| | || |||| || | | ||
Sbjct 192365 AATCGCGCGCACGAACTTCTTCCTTTCCATGGTTCTTGCGAAGGTCCATGAACTGCATGA 192424
Query 245106 CGTCGACGTGCCAGGGCTCCATGTAGACAGCGAGGGCGCCGGGCCGCTTGTTGCCTCCCT 245165
|||| | ||||| ||||| | ||||| || | || || || ||||||||||| ||||
Sbjct 192425 CGTCTGCATGCCACGGCTCAAGGTAGATGGCAAAAGCACCTGGACGCTTGTTGCCACCCT 192484
Query 245166 GGTCCACCATCCTCTCGAGC-GCGTTG---AAGATGCGCAGGGTAGGCACTATGCCGTTA 245221
||| || | | ||||| | |||| ||| || || | || || | |||||
Sbjct 192485 GGT----CAACGTAACGAGCAGTGTTGTTATAGACTCGTAGCATTGGTACAAGACCGTTG 192540
Query 245222 GAGTGGCCGTTGGTGCCCTTGATGTAGGCGCCCTTGCCCCTGAGGTTGCTGATGGACATG 245281
|| |||||| ||||| ||||| | ||| || |||||| |||| || |||||
Sbjct 192541 GATGTGCCGTTTGTGCCGCCAATGTATGAGCCTGTGGCCCTGATGTTG----TGAACATG 192596
Query 245282 ----CCTAGTCCGCCGGCGTGCTTGGAGATGAGGGCGCAGCTCTTGATGGTGTCTGCTAT 245337
|| | ||||| |||| ||||||||| | ||| || |||||| ||| || ||
Sbjct 192597 AAGACCAATACCGCCAGCGTTCTTGGAGATCATGGCACATATCTTGAGGGTATCGTAGAT 192656
Query 245338 GCCCTCCATGCTGTCCGACTTCATGTTGAGCAGAAAGCAGGAGGACAGCTGGGGCT-TGG 245396
|| || |||||||| ||||||| | || |||||||| | ||||| | || |||
Sbjct 192657 ACCATCAATGCTGTCATCCTTCATGGCCACCAAGAAGCAGGATGCTAGCTGCGCCTGTGG 192716
Query 245397 GG 245398
||
Sbjct 192717 GG 192718
>seq141
Length=803466
Score = 87.8 bits (96), Expect = 3e-12
Identities = 100/131 (76%), Gaps = 4/131 (3%)
Strand=Plus/Minus
Query 242937 GAGCTGATGAGGTTCCCGGACAGGACCACTCCGATCGGACAGATGATCAACTCGTACCTG 242996
|||| ||||| |||||||||||||| || ||||||||||||||||||| || ||
Sbjct 60055 GAGCATATGAGATTCCCGGACAGGACGACAGTGATCGGACAGATGATCAACAGCTATCT- 59997
Query 242997 CTCAACAAG-AGCG-ATCTGGACGATCACGTCGTACACCTCCTGTTCTCGGCCAACCGAT 243054
||| || | || | | || ||||||| | |||| || || |||||||| || ||||
Sbjct 59996 -CCAAGGAGCATCGCAACAAGAAGATCACGCCATACATCTGCTTTTCTCGGCGAATCGAT 59938
Query 243055 GGGAAGCCGCC 243065
||||||| |||
Sbjct 59937 GGGAAGCTGCC 59927
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 944337535602160
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |