Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Dothistroma_20septosporum_20[genbank_20GCA_5F002236515.1_202017-07-
28] 141 sequences; 30,033,957 total letters
Query= NC_013668.3
Length=248526
Score E
Sequences producing significant alignments: (Bits) Value
seq80 132 8e-26
>seq80
Length=246247
Score = 132 bits (146), Expect = 8e-26
Identities = 440/669 (66%), Gaps = 14/669 (2%)
Strand=Plus/Plus
Query 204883 CTCCACGATCTCGGTGCACAAGTTACCGCACTTCACCACCCCCACATGCTGCTGGTTAGA 204942
||||| |||||| |||||||| ||| || ||| | || | || || ||||||
Sbjct 192045 CTCCATGATCTCAGTGCACAAATTAGAGCTCTTGATGGTGCCAAGATTCTTCTGGTTGCT 192104
Query 204943 CTTGCGGTTACAGGAGTCCTTGTACATCATGAACGGCATTCCGTTCTCCATCTGAGA-TC 205001
||||||||| || ||||||||||| ||||| || | ||| |||| |||| | ||
Sbjct 192105 CTTGCGGTTGGCGGCGTCCTTGTACAGAATGAAAGGTGTGCCGGTCTCGGTCTGCGCCTC 192164
Query 205002 GCAGAATGTGGGTCCACAATTCGCGAGCCTCCACTTGCTTCACGTACATC-CCTTGAGAC 205060
| ||||| ||| | || |||| || || |||| | | |||| |
Sbjct 192165 G-AGAATAGCATACCATATTTTCTGAGCACGAACCGTCT-CACGGCCCTTGCCTTCTCTC 192222
Query 205061 TCGTATTTTGTGTACAGCGCCACAAAGTCAGAACCGTACACGTCCATCAGCCCTGGACAT 205120
|| || ||||||| || || || |||||| || ||| ||| || || |||
Sbjct 192223 TCATAACGCTCGTACAGCTCCTTGAACTCGTCACCGTAAACATCCGACAGACCAGGGCAT 192282
Query 205121 TTTTTGGGACACATCAGAGACCACAT-CTGATCGTCTTTCACCCTCTCCATAAACAGGTC 205179
| ||||| |||||||||| ||| | | | || | || || | || |||||| || ||
Sbjct 192283 TCGTTGGGGCACATCAGAGTCCAAGTGCCGTTC-TGTTCGACACGCTGCATAAAGAGATC 192341
Query 205180 GCTGATCCACAGGCCGTAAAACAGATCACGGGCCCTAATTCCGTCGTCTCCAAGGTTCTT 205239
| ||||| || |||| |||| ||| || || | || | | || | |||| |||||||
Sbjct 192342 GGGAATCCAGAGAGCGTAGAACAAATCGCGCGCACGAACTTCTTCCTTTCCATGGTTCTT 192401
Query 205240 TTTCAAGTCCAGCCAAGCCGCA--ATGTCGGCGTGCCACGGCTCTAACCACACGGCCATT 205297
| ||||| | | ||| | ||| || ||||||||||| | | | ||| |
Sbjct 192402 GCGAAGGTCCATGAA--CTGCATGACGTCTGCATGCCACGGCTCAAGGTAGATGGCAAAA 192459
Query 205298 GCGCCTGGCCTCTTGTTCCCACCCTGGTCCACCATGCGAGTCATCGCGTTGAAAACTCGC 205357
|| ||||| | |||||| ||||||||||| || |||| | ||| | |||||
Sbjct 192460 GCACCTGGACGCTTGTTGCCACCCTGGTCAACGTAACGAGCAGTGTTGTTATAGACTCGT 192519
Query 205358 AGCATCGGCACCAGACCGTTGGCGGTCCCGTTCGTGCTGTTGATGGCCGAGCCTTCAGCC 205417
||||| || || |||||||||| || ||||| |||| | ||| |||||| |||
Sbjct 192520 AGCATTGGTACAAGACCGTTGGATGTGCCGTTTGTGCCGCCAATGTATGAGCCTGTGGCC 192579
Query 205418 CTCACGTTG-GAGATGGCCGCGCCAATCCCGCCAGAACACTTGGCGATCTGGGCGCA-CT 205475
|| | |||| || | | ||||| ||||||| ||||| |||| ||| || |
Sbjct 192580 CTGATGTTGTGAACATGAAG-ACCAATACCGCCAGCGTTCTTGGAGATCATGGCACATAT 192638
Query 205476 CTTGCAGAGTGCTGTAGATGCCTGCGATGGAATCGTCCGCCAGTGTCACCAGATAGCACG 205535
|||| || || |||||| || | ||| || ||| || | ||||| |||| |
Sbjct 192639 CTTG-AGGGTATCGTAGATACCATCAATGCTGTCATCCTTCATGGCCACCAAGAAGCAGG 192697
Query 205536 AAGCCAGCT 205544
| || ||||
Sbjct 192698 ATGCTAGCT 192706
Score = 86.0 bits (94), Expect = 1e-11
Identities = 222/336 (66%), Gaps = 2/336 (1%)
Strand=Plus/Plus
Query 204185 GGGTTGATGATCTGAAAGTCTCCGGACAGCACCCCTCGGGTGAACAGGTTGTTGGTGAAT 204244
||||||| || ||| || || || | || ||| | || | | | | |||| | ||| ||
Sbjct 191428 GGGTTGACGACCTGGAACTCGCCAGCCAACACACGACGAGAGTAAATGTTGCTTGTGTAT 191487
Query 204245 GGTTCGAACGCCTCGTTGTTGCCGAAAATCTGAGCGGTGCTGGCCGTGGGCATGGGAGCC 204304
|| ||||| |||||| ||| | ||||| | ||| ||| || ||||| || ||
Sbjct 191488 GGCTCGAAGCACTCGTTAAAGCCCATGATCTGCGAGGTCGAGGCTGTTGGCATCGGCGCA 191547
Query 204305 AGGAGCAGGGAGTTGCGCACACCGTATTTTTGGACCCTGCGCTTCAGAGAGGTCCAGTCG 204364
| ||| || |||||||||||||||| | || | ||| ||| || | || ||||||
Sbjct 191548 ACGAGAAGCGAGTTGCGCACACCGTGCTGGGCGATCTTGCCCTTGAGTGCGGCCCAGTCC 191607
Query 204365 TGCATCGCACTGGGTTTCACGCCCCACATGTCGAACTGAAAGATGCCTTGACTGACTGGG 204424
| | | || || ||||||||||||| |||| | ||| || |||||
Sbjct 191608 CAGAGGTCGGTAGGAGTCTTGCCCCACATGTCGTACTGGAGCTCGCCCTGCGATACTGGA 191667
Query 204425 CTGCCCTTGTACGTCGGATAAGG-CTGATCCTCTTCTGCCAGCTTGCACGAGGCGGCCAT 204483
||| ||| ||| ||||| | || | || || || |||| ||| || || | |
Sbjct 191668 GAGCCTGGGTATGTCTCGTAAGGACCGAGCTTC-TCAGCAAGCTCGCATGAAGCCTCAAG 191726
Query 204484 GGCGTGATAGTACATGGTCTCAAAGATCTGAACGTT 204519
|| || || ||||||||||| ||||| | |||
Sbjct 191727 AGCAGCATGATAGATGGTCTCAAAAATCTGGATGTT 191762
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 795153798538960
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |