Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Dothistroma_20septosporum_20[genbank_20GCA_5F002236515.1_202017-07- 28] 141 sequences; 30,033,957 total letters Query= NC_013668.3 Length=248526 Score E Sequences producing significant alignments: (Bits) Value seq80 132 8e-26 >seq80 Length=246247 Score = 132 bits (146), Expect = 8e-26 Identities = 440/669 (66%), Gaps = 14/669 (2%) Strand=Plus/Plus Query 204883 CTCCACGATCTCGGTGCACAAGTTACCGCACTTCACCACCCCCACATGCTGCTGGTTAGA 204942 ||||| |||||| |||||||| ||| || ||| | || | || || |||||| Sbjct 192045 CTCCATGATCTCAGTGCACAAATTAGAGCTCTTGATGGTGCCAAGATTCTTCTGGTTGCT 192104 Query 204943 CTTGCGGTTACAGGAGTCCTTGTACATCATGAACGGCATTCCGTTCTCCATCTGAGA-TC 205001 ||||||||| || ||||||||||| ||||| || | ||| |||| |||| | || Sbjct 192105 CTTGCGGTTGGCGGCGTCCTTGTACAGAATGAAAGGTGTGCCGGTCTCGGTCTGCGCCTC 192164 Query 205002 GCAGAATGTGGGTCCACAATTCGCGAGCCTCCACTTGCTTCACGTACATC-CCTTGAGAC 205060 | ||||| ||| | || |||| || || |||| | | |||| | Sbjct 192165 G-AGAATAGCATACCATATTTTCTGAGCACGAACCGTCT-CACGGCCCTTGCCTTCTCTC 192222 Query 205061 TCGTATTTTGTGTACAGCGCCACAAAGTCAGAACCGTACACGTCCATCAGCCCTGGACAT 205120 || || ||||||| || || || |||||| || ||| ||| || || ||| Sbjct 192223 TCATAACGCTCGTACAGCTCCTTGAACTCGTCACCGTAAACATCCGACAGACCAGGGCAT 192282 Query 205121 TTTTTGGGACACATCAGAGACCACAT-CTGATCGTCTTTCACCCTCTCCATAAACAGGTC 205179 | ||||| |||||||||| ||| | | | || | || || | || |||||| || || Sbjct 192283 TCGTTGGGGCACATCAGAGTCCAAGTGCCGTTC-TGTTCGACACGCTGCATAAAGAGATC 192341 Query 205180 GCTGATCCACAGGCCGTAAAACAGATCACGGGCCCTAATTCCGTCGTCTCCAAGGTTCTT 205239 | ||||| || |||| |||| ||| || || | || | | || | |||| ||||||| Sbjct 192342 GGGAATCCAGAGAGCGTAGAACAAATCGCGCGCACGAACTTCTTCCTTTCCATGGTTCTT 192401 Query 205240 TTTCAAGTCCAGCCAAGCCGCA--ATGTCGGCGTGCCACGGCTCTAACCACACGGCCATT 205297 | ||||| | | ||| | ||| || ||||||||||| | | | ||| | Sbjct 192402 GCGAAGGTCCATGAA--CTGCATGACGTCTGCATGCCACGGCTCAAGGTAGATGGCAAAA 192459 Query 205298 GCGCCTGGCCTCTTGTTCCCACCCTGGTCCACCATGCGAGTCATCGCGTTGAAAACTCGC 205357 || ||||| | |||||| ||||||||||| || |||| | ||| | ||||| Sbjct 192460 GCACCTGGACGCTTGTTGCCACCCTGGTCAACGTAACGAGCAGTGTTGTTATAGACTCGT 192519 Query 205358 AGCATCGGCACCAGACCGTTGGCGGTCCCGTTCGTGCTGTTGATGGCCGAGCCTTCAGCC 205417 ||||| || || |||||||||| || ||||| |||| | ||| |||||| ||| Sbjct 192520 AGCATTGGTACAAGACCGTTGGATGTGCCGTTTGTGCCGCCAATGTATGAGCCTGTGGCC 192579 Query 205418 CTCACGTTG-GAGATGGCCGCGCCAATCCCGCCAGAACACTTGGCGATCTGGGCGCA-CT 205475 || | |||| || | | ||||| ||||||| ||||| |||| ||| || | Sbjct 192580 CTGATGTTGTGAACATGAAG-ACCAATACCGCCAGCGTTCTTGGAGATCATGGCACATAT 192638 Query 205476 CTTGCAGAGTGCTGTAGATGCCTGCGATGGAATCGTCCGCCAGTGTCACCAGATAGCACG 205535 |||| || || |||||| || | ||| || ||| || | ||||| |||| | Sbjct 192639 CTTG-AGGGTATCGTAGATACCATCAATGCTGTCATCCTTCATGGCCACCAAGAAGCAGG 192697 Query 205536 AAGCCAGCT 205544 | || |||| Sbjct 192698 ATGCTAGCT 192706 Score = 86.0 bits (94), Expect = 1e-11 Identities = 222/336 (66%), Gaps = 2/336 (1%) Strand=Plus/Plus Query 204185 GGGTTGATGATCTGAAAGTCTCCGGACAGCACCCCTCGGGTGAACAGGTTGTTGGTGAAT 204244 ||||||| || ||| || || || | || ||| | || | | | | |||| | ||| || Sbjct 191428 GGGTTGACGACCTGGAACTCGCCAGCCAACACACGACGAGAGTAAATGTTGCTTGTGTAT 191487 Query 204245 GGTTCGAACGCCTCGTTGTTGCCGAAAATCTGAGCGGTGCTGGCCGTGGGCATGGGAGCC 204304 || ||||| |||||| ||| | ||||| | ||| ||| || ||||| || || Sbjct 191488 GGCTCGAAGCACTCGTTAAAGCCCATGATCTGCGAGGTCGAGGCTGTTGGCATCGGCGCA 191547 Query 204305 AGGAGCAGGGAGTTGCGCACACCGTATTTTTGGACCCTGCGCTTCAGAGAGGTCCAGTCG 204364 | ||| || |||||||||||||||| | || | ||| ||| || | || |||||| Sbjct 191548 ACGAGAAGCGAGTTGCGCACACCGTGCTGGGCGATCTTGCCCTTGAGTGCGGCCCAGTCC 191607 Query 204365 TGCATCGCACTGGGTTTCACGCCCCACATGTCGAACTGAAAGATGCCTTGACTGACTGGG 204424 | | | || || ||||||||||||| |||| | ||| || ||||| Sbjct 191608 CAGAGGTCGGTAGGAGTCTTGCCCCACATGTCGTACTGGAGCTCGCCCTGCGATACTGGA 191667 Query 204425 CTGCCCTTGTACGTCGGATAAGG-CTGATCCTCTTCTGCCAGCTTGCACGAGGCGGCCAT 204483 ||| ||| ||| ||||| | || | || || || |||| ||| || || | | Sbjct 191668 GAGCCTGGGTATGTCTCGTAAGGACCGAGCTTC-TCAGCAAGCTCGCATGAAGCCTCAAG 191726 Query 204484 GGCGTGATAGTACATGGTCTCAAAGATCTGAACGTT 204519 || || || ||||||||||| ||||| | ||| Sbjct 191727 AGCAGCATGATAGATGGTCTCAAAAATCTGGATGTT 191762 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 795153798538960