Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Dothistroma_20septosporum_20[genbank_20GCA_5F002236515.1_202017-07-
28] 141 sequences; 30,033,957 total letters
Query= NC_014766.1
Length=194022
Score E
Sequences producing significant alignments: (Bits) Value
seq80 259 6e-64
seq64 113 6e-20
seq55 111 2e-19
>seq80
Length=246247
Score = 259 bits (286), Expect = 6e-64
Identities = 903/1386 (65%), Gaps = 35/1386 (3%)
Strand=Plus/Minus
Query 111621 ATGTTCATGCGGGTCGCGATCGGTATCCATGGGGAAGATATTGATTCTGTTTTGGAGACA 111680
||| ||||||| || || |||| || ||||||||||| ||||| | | | ||||||
Sbjct 192839 ATGATCATGCGTGTGGCTGTCGGCATTCATGGGGAAGACATTGAAGCAGCGATTGAGACA 192780
Query 111681 TACGACAAGATGTCCC-GTGGTATGTTCATCCACGCAACACCAACCCTCTTCAACGCTGG 111739
||| || | ||||| | ||| |||| || || | ||||| || |||| |||||
Sbjct 192779 TACAACTACATGTCGTTGAAGTAC-TTCACACATGCTTCGCCAACACTTTTCAGTGCTGG 192721
Query 111740 TACACCA-AGACCC--CAAATGTCCAGTTGTTTCCTTATTGCAAACAAGGAGGATTCAAT 111796
||| ||| || | | | | ||| || ||| | | || | ||||| || ||
Sbjct 192720 TACCCCACAGGCGCAGCTAGCATCC---TGCTTCTTGGTGGCCATGAAGGATGACAGCAT 192664
Query 111797 CAATGGCATTTACGGCACTCTCACTGAATGTGCCCAAATCTCAAAGTGGGCTGGTGGTAT 111856
|||| || |||| || |||| ||||||| ||||| ||| ||||| |||||
Sbjct 192663 TGATGGTATCTACGATACCCTCAAGATATGTGCCATGATCTCCAAGAACGCTGGCGGTAT 192604
Query 111857 CGGGATGCACATCCATGATGTCAGAGCCAACAAGTCTCGTA--TTAGAGGTACAAATGGT 111914
|| | || | || | |||| |||| || ||| || || | || ||||| ||
Sbjct 192603 TGGTCTTCATGTTCACAACATCAGGGCCAC--AGGCTCATACATTGGCGGCACAAACGGC 192546
Query 111915 CAATCAGATGGTATTATTCCAATGCTTCGCGTATTTAACGCCACAGCGCGCTATGTAAAC 111974
||| | ||| || | |||||||| || || | |||| ||| || || || || ||
Sbjct 192545 ACATCCAACGGTCTTGTACCAATGCTACGAGTCTATAACAACACTGCTCGTTACGTTGAC 192486
Query 111975 CAAGCTGG------GCGTCGCAAGGGATCTATCGCAGTCTATCTTGAGCCATGGCACGCG 112028
|| | ||| ||||| || | | || | || |||| |||||||| ||||| ||
Sbjct 192485 CAGGGTGGCAACAAGCGTC-CAGGTG--CTTTTGCCATCTACCTTGAGCCGTGGCATGCA 192429
Query 112029 GATATCATGGAGTTCCTTGAGTTGCGTCTCAACCAAGGTGATGAGGAGGCGCGGTGC-CG 112087
|| ||||| ||||| | || | || ||||| || | || || | || ||| ||
Sbjct 192428 GACGTCATGCAGTTCATGGACCTTCGCAAGAACCATGGAAAGGAAGAAGTTCG-TGCGCG 192370
Query 112088 CGATCTCTTCTCCGCTCTCTGGATTCCAGATCTCTTCATGAAGAGAGTTGAGGAGAGTGG 112147
|||| | |||| ||||||||||||||| |||||||| ||| || | || || ||| ||
Sbjct 192369 CGATTTGTTCTACGCTCTCTGGATTCCCGATCTCTTTATGCAGCGTGTCGAACAGAACGG 192310
Query 112148 CAATTGGTCTCTCTTTTGTCCAGAC-AAGGCACCCGGTCTCTCCGATGCCGTGGGTGAGG 112206
|| |||| |||| | || || || || || || ||||| || |||| ||||| |
Sbjct 192309 CACTTGGACTCTGATGTGCCCCAACGAATGC-CCTGGTCTGTCGGATGTTTACGGTGACG 192251
Query 112207 AGTTTGAAGCCCTCTACACAAAGTACGAGGAAGAAAGTCGGGCGACTGCGACGGTGCCAG 112266
|||| | | || ||| || ||| |||| | || || |||||| | |
Sbjct 192250 AGTTCAAGGAGCTGTACGAGCGTTATGAGAGAGAAGGCAAGGGCCGTGAGACGGTTCGTG 192191
Query 112267 CTGCCGATGTGTGGAAAGCTATTCTCAAGTCTCAAACCGAGACTGGTACACCATATATGC 112326
|| | | ||| | ||||||||| || | || |||||||| || ||||| | || |
Sbjct 192190 CTCAGAAAATATGGTATGCTATTCTCGAGGCGCAGACCGAGACCGGCACACCTTTCATTC 192131
Query 112327 TTTACAAAGACGCCTGTAACCAAAAGAGTAATCAAAAGAATTTGGGTGTGATCAAGAGTT 112386
| ||||| |||||| |||| ||||| || || |||||| | || |||||||| |
Sbjct 192130 TGTACAAGGACGCCGCCAACCGCAAGAGCAACCAGAAGAATCTTGGCACCATCAAGAGCT 192071
Query 112387 CCAACCTCTGTACAGAAATCTTGGAATTTACAGACAAAGATGAGACGGCTGTGTGTAACC 112446
| || | || || || ||| |||| | | | ||||||| ||||| || || |
Sbjct 192070 CTAATTTGTGCACTGAGATCATGGAGTACTCTGCTCCAGATGAGGTCGCTGTCTGCAATC 192011
Query 112447 TCGCATCAATCGCTCTCCCCAAGTATGTGGATCCAGAGACAAAGACATTTGATTATGAAA 112506
| || || | ||||| |||| || || || |||| || ||||| | | |
Sbjct 192010 TGGCTTCGCTTGCTCTGCCCACCTACGTCGACATCGAGAACGAGGTTTTTGACTTCAAGA 191951
Query 112507 AACTCCACGAAGTTACGAAAACTGTCACAAAAAACCTAAACAGAGTTATTGATAGAAATT 112566
|||| ||||| || || ||| |||||| ||||| |||| || || | || |
Sbjct 191950 AACTTCACGAGGTCACCAAAGTGGTCACACGTAACCTGAACAAGACCATCGAGATCAACT 191891
Query 112567 TTTACCCCGT-TGAGACTGCTCGTAAATCTAATATGAGACACCGTCCAATTGGTCTCGGT 112625
||||| || ||| || || || || | | ||||| || |||||||| |||
Sbjct 191890 ACTACCCAGTACCAGA-GGCACGAAAGAGCAACTTCCGCCACCGACCCATTGGTCTTGGT 191832
Query 112626 GTCCAAGGTCTCGCGGATGTATTCATTCTTTGTCGCCACG-CATTTGATTCCGACGAAGC 112684
||| | ||||| || |||| ||| || | || || | |||| || || || ||
Sbjct 191831 GTCAACGGTCTTGCTGATGCCTTC-TTGGCTCTCCGCATGCCATTCGACTCGCCTGAGGC 191773
Query 112685 GAAGGAAATCAATGCGCGTATATTTGAGACAATGTATCACGCCGCTCTTGAGGCGAGTTC 112744
||||| | || | || |||||||| || ||||| || ||||||||||| |
Sbjct 191772 CAAGGAGCTTAACATCCAGATTTTTGAGACCATCTATCATGCTGCTCTTGAGGCTTCATG 191713
Query 112745 GGAGTTGGCAGAGGTTGATGGTCCATATGAAACCTTTGAGGGTTCTCCAGCTTCACAAGG 112804
||| | || ||| ||||| || || || | || ||||||| || || ||
Sbjct 191712 CGAGCTTGCTGAGAAGCTCGGTCCTTACGAGACATACCCAGGCTCTCCAGTATCGCAGGG 191653
Query 112805 GGTGCTTCAATTTGATATGTGGG--AAG-GTGAGACCAAGCTTCACTACGACTGGGACGC 112861
| ||| || | || ||||||| ||| | ||| | || || ||||||| |||
Sbjct 191652 CGAGCTCCAGTACGACATGTGGGGCAAGACTCCTACCGACCT---CTGGGACTGGGCCGC 191596
Query 112862 TCTCAAGGAACGCATCAAGGAGAAGGGTCTTCGTAACAGTCTTTTGATGGCACCAATGCC 112921
||||||| ||| || | ||| | || ||| ||| | | || || |||||
Sbjct 191595 ACTCAAGGGCAAGATCGCCCAGCACGGTGTGCGCAACTCGCTTCTCGTTGCGCCGATGCC 191536
Query 112922 AACAGCCTCCACCGCACAAATCTTGGGTAATAATGAATGCTTTGAACCCTACACGACGAA 112981
||||||||| ||| | || ||| |||| ||| || ||||| || || ||||| | ||
Sbjct 191535 AACAGCCTCGACCTCGCAGATCATGGGCTTTAACGAGTGCTTCGAGCCATACACAAGCAA 191476
Query 112982 CATCTA 112987
||| ||
Sbjct 191475 CATTTA 191470
>seq64
Length=404236
Score = 113 bits (124), Expect = 6e-20
Identities = 225/325 (69%), Gaps = 10/325 (3%)
Strand=Plus/Minus
Query 176732 AGACCCTTGATGTGGGAACCGTCGTTATCGGCATCCGTCATGATCATGAGACGACCATAC 176791
|||||||||||||| || || |||| ||| ||| ||||||||||| ||| | |||||
Sbjct 324065 AGACCCTTGATGTGAGAGCCATCGTGATCCTGATCGGTCATGATCATCAGATGGCCATAA 324006
Query 176792 CG-AAGCTCGGAAACATCTTGATAGTCCTTACCCTGTTGAAGACCCAAGATCTTCTTGA- 176849
|| |||| | | |||| |||||||| ||||| |||||||| | ||||||||
Sbjct 324005 CGCAAGC-CTTTAGTATCTGTGTAGTCCTTCTTATGTTGCAGACCCAAAAACTTCTTGAT 323947
Query 176850 GATCGTTGAA-CTCTTGGTTTGATGTGAGCTGTGTGACAGAGGCATCACGAACATTCTTA 176908
| || |||| ||| ||| || | ||| || || ||||| || ||||| |
Sbjct 323946 GTTC--TGAATCTCGGCGTTCTTTGAAATCTGGTCGATGGAAGCATCGCGCACATTGAGA 323889
Query 176909 CACTTCCCACGAAGAGGGAAGACACCGTAGTGATCGCGACCAACCACAGAGAGACCCGCA 176968
||| || ||||| ||||||||||| | | || | || |||| | || |||
Sbjct 323888 ATCTTACCCCGAAGTGGGAAGACACCAAACAGGTCTGGGTTGACAACAGCTCGCCCTGCA 323829
Query 176969 ACCGCGAGCGTTTTCGCAGAATCACCCTCTGTCACGATGAGTGTACACTTGCCAGATTGT 177028
| || ||| ||||| ||||| ||||||| ||||||||| |||||| || ||
Sbjct 323828 AGAGCAAGCAAGGCGGCAGAGTCACCTTCTGTCAAGATGAGTGTGCACTTG--TGACCGT 323771
Query 177029 GC--CGTACCCGCCTTGTTCGCATC 177051
| |||||| |||||||| || ||
Sbjct 323770 CCTTCGTACCGGCCTTGTTGGCGTC 323746
>seq55
Length=2050790
Score = 111 bits (122), Expect = 2e-19
Identities = 116/150 (77%), Gaps = 2/150 (1%)
Strand=Plus/Minus
Query 102183 CGACTCTTCGCATTTGCGTGTGTTGAGGGTATCTTCTTCTCTGGTTCCTTCTGC-GCTAT 102241
|| ||| | |||||||| ||||||||||||||||||||||| | ||| ||| |||||
Sbjct 265562 CGTCTCATTGCATTTGCCGCCGTTGAGGGTATCTTCTTCTCTGGAT-CTTTTGCTGCTAT 265504
Query 102242 TTATTGGCTCAAGAAGCGAGGTCTCATGCCAGGTCTCTGCTTCTCCAACGAGCTTATCTC 102301
| ||||| ||||| || ||||||||| | || ||| ||||| |||||||| |||||
Sbjct 265503 CTTCTGGCTGAAGAAACGTGGTCTCATGGCCGGGCTCACATTCTCGAACGAGCTCATCTC 265444
Query 102302 TCGTGACGAGGGACTCCACCAAGAGTTTGC 102331
||||| ||||| | ||| ||| || ||
Sbjct 265443 CCGTGATGAGGGCATGCACACAGACTTCGC 265414
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 620741305941520
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |