Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Dothistroma_20septosporum_20[genbank_20GCA_5F002236515.1_202017-07- 28] 141 sequences; 30,033,957 total letters Query= NC_014789.1 Length=184409 Score E Sequences producing significant alignments: (Bits) Value seq80 188 8e-43 seq55 93.3 5e-14 >seq80 Length=246247 Score = 188 bits (208), Expect = 8e-43 Identities = 889/1394 (64%), Gaps = 31/1394 (2%) Strand=Plus/Plus Query 105935 TAGATGTTCGTCGTGTAGGGTTCAAAGCATTCATTATTACCCAAGATTTGTGCGGTGGAG 105994 || ||||| | ||||| || || ||||| || ||| |||| ||| || | ||| ||| Sbjct 191470 TAAATGTTGCTTGTGTATGGCTCGAAGCACTCGTTAAAGCCCATGATCTGCGAGGTCGAG 191529 Query 105995 GCTGTTGGCATTGGTGCCATCAAAAGACTGTTACGAAGACCCTTTTCCTTGATGCGTTCC 106054 ||||||||||| || || | | ||| ||| || | ||| | | ||| || Sbjct 191530 GCTGTTGGCATCGGCGCAACGAGAAGCGAGTTGCGCACACCGTGCTGGGCGATCTTGCCC 191589 Query 106055 TTGAGAACATCCCAGTCGTAGTTGAGCTTGGTTTCAC-CTT--CCCACATATCAAATTGA 106111 ||||| | ||||||| || || | ||| | ||| ||||||| || | || Sbjct 191590 TTGAGTGCGGCCCAGTCCCAG---AGGTCGGTAGGAGTCTTGCCCCACATGTCGTACTGG 191646 Query 106112 AGCACCCCTTGGGACGTGGGAGAACCCTCAAATGTCTCATAGGAACCTTGGGCTTC--AG 106169 ||| | || || || ||||| || ||||||| || | ||| | ||||| || Sbjct 191647 AGCTCGCCCTGCGATACTGGAGAGCCTGGGTATGTCTCGTAAGGACC--GAGCTTCTCAG 191704 Query 106170 CCAATTCACAGCTCGCCTCCAGGGATGCGTGATACATGGTTTCAAAGATACGAGCATTCA 106229 | | || || ||||| || | || ||||| ||||| ||||| || | || | Sbjct 191705 CAAGCTCGCATGAAGCCTCAAGAGCAGCATGATAGATGGTCTCAAAAATCTGGATGTTAA 191764 Query 106230 TCTCCTTGGCTTCATCTGAATCAAATGCGTAGCGGCACAAAATAAATACATCCGCGAGAC 106289 ||||||||| ||| || || |||| |||| | || |||| || |||| Sbjct 191765 GCTCCTTGGCCTCAGGCGAGTCGAATGGCATGCGGAGAGCCAAGAAGGCATCAGCAAGAC 191824 Query 106290 CTTGAACACCCAAACCAATAGGTCTGTGTCGCATATTAGACTTTCGCGCAGTCTCA-ACG 106348 | | ||||| | |||||| |||| ||| || | || |||||| || ||| || Sbjct 191825 CGTTGACACCAAGACCAATGGGTCGGTGGCGGAAGTTGCTCTTTCGTGCC-TCTGGTACT 191883 Query 106349 GGATAAAAATTTCTGTCAATGACTCGGTTTAGATTTTTGGTAACAATCTTTGTGATTTCA 106408 || || | || | || ||| ||| || || || || | || |||| || Sbjct 191884 GGGTAGTAGTTGATCTCGATGGTCTTGTTCAGGTTACGTGTGACCACTTTGGTGACCTCG 191943 Query 106409 TGAAGTTTTTCATAATCAAAAGTGCGAGTCTCTTCATTGACATACTTTGGAAGGGCGATT 106468 |||||||| | | |||||| |||| | ||| || | || || || | Sbjct 191944 TGAAGTTTCTTGAAGTCAAAAACCTCGTTCTCGATGTCGACGTAGGTGGGCAGAGCAAGC 192003 Query 106469 GATGCCAAATTGCAAACAGCCGTCTCATCCTTATCTGTGTACTCTAAAATTTCTGTACAC 106528 || |||| |||||| ||||| |||||| | | | |||||| | || || || ||| Sbjct 192004 GAAGCCAGATTGCAGACAGCGACCTCATCTGGAGCAGAGTACTCCATGATCTCAGTGCAC 192063 Query 106529 AAGTTGGAACTCTTAATCGTCCCCAAATTCTTTTGGTTACTCTTTTTGTTGCACGCATCC 106588 || || || ||||| || || || | |||||| ||||| ||||| |||| || ||| Sbjct 192064 AAATTAGAGCTCTTGATGGTGCCAAGATTCTTCTGGTTGCTCTTGCGGTTGGCGGCGTCC 192123 Query 106589 TTGTAGAGCATGTAGGGCGTCCCCGTCTCCGTCTGTGACTTGAGAATTGCCTTCCACACA 106648 ||||| || ||| | || || || ||||| ||||| | || |||||| || | ||| | Sbjct 192124 TTGTACAGAATGAAAGGTGTGCCGGTCTCGGTCTGCGCCTCGAGAATAGCATACCATATT 192183 Query 106649 TCGGCGGCTGGTACAATGGCGTTGGCCCGTCCCTCCGC-CTCGTACTTTGTGTAGAGGGC 106707 | || | || | | ||||| | ||| | | ||| || ||| || | Sbjct 192184 TTCTGAGCACGAACCGTCTCAC-GGCCCTTGCCTTCTCTCTCATAACGCTCGTACAGCTC 192242 Query 106708 TTCAAACTCCTCACCCACCGCGTCGGAGAGACCTGGTGCCTT-GTCTGGACAGAAAAGAG 106766 | ||||| ||||| | || || ||||| || || || || || || | |||| Sbjct 192243 CTTGAACTCGTCACCGTAAACATCCGACAGACCAGG-GCATTCGTTGGGGCACATCAGAG 192301 Query 106767 ACCATTGACCACCCTCCTCAACCCGCTTCATGAAAAGGTCTGGAATCCACAGGGATGAAA 106826 ||| || || || || |||| ||| || || || |||||||| || | | | Sbjct 192302 TCCAAGTGCCGTTCTGTTCGACACGCTGCATAAAGAGATCGGGAATCCAGAGAGCGTAGA 192361 Query 106827 AGAGATCTCTACACCGAGCCTCTTCGTCACCTTGGTTGAGTCGTAACTCAAGGAACTCCA 106886 | | ||| | ||| | ||||| | || ||||| || | || | ||||| || Sbjct 192362 ACAAATCGCGCGCACGAACTTCTTCCTTTCCATGGTTCTTGCGAAGGTCCATGAACTGCA 192421 Query 106887 TGATATCCGCGTGCCATGGCTCAAGATAGACTGCGATAGATCCCTTTCGACGC------C 106940 ||| || || ||||| |||||||| |||| || | || || | ||||| | Sbjct 192422 TGACGTCTGCATGCCACGGCTCAAGGTAGATGGCAAAAGCACC---TGGACGCTTGTTGC 192478 Query 106941 CAGCTTGATTTACATAGCGCGCTGTGGCGTTAAATACGCGAAGCATTGGAATAATACCAT 107000 || | || | || || || || ||| |||| | || || |||||||| | || ||| | Sbjct 192479 CACCCTGGTCAACGTAACGAGCAGTGTTGTTATAGACTCGTAGCATTGGTACAAGACCGT 192538 Query 107001 CTGATTGACCATTTGTCCCCCGAAT--ACGAGATTTATTGGCTCTCACATCATGGATGTG 107058 ||| || ||||| || | ||| | ||| | |||| || | | || | || Sbjct 192539 TGGATGTGCCGTTTGTGCCGCCAATGTATGAGCCTG--TGGCCCTGATGTTGTGAACATG 192596 Query 107059 CATCCCAATACCCCCAGCCCACTTTGAGATTTGCGCACACTCCGTAAGAGTTCCATAGAT 107118 | |||||||| ||||| ||| ||||| ||||| | | || || | ||||| Sbjct 192597 AAGACCAATACCGCCAGCGTTCTTGGAGATCATGGCACATATCTTGAGGGTATCGTAGAT 192656 Query 107119 ACCGTTGATTGAGTCCTCCTTGTTGGCGATAAGGAAGCAACTGGACATCTGCGGTCTTGG 107178 ||| | || ||| ||||| |||| | | |||||| | | ||||| ||| Sbjct 192657 ACCATCAATGCTGTCATCCTTCATGGCCACCAAGAAGCAGGATGCTAGCTGCGCCTGTGG 192716 Query 107179 TGTACCAGCATTGAAGAGGGTTGGTGTTGCGTGAATGAACATACCTTGG-GACATCTTGT 107237 ||||||||| |||| || ||||| | || || |||| ||| | ||||| | || Sbjct 192717 GGTACCAGCACTGAAAAGTGTTGGCGAAGCATGTGTGAAG-TACTTCAACGACATGTAGT 192775 Query 107238 CGTATGTCTCCAAGACAGAATCAATGTCTTCCCCGTGGATGCCGATGGCCACACGCATAA 107297 ||||||||| | | | |||||||||||||| || ||||||| ||||||||||| | Sbjct 192776 TGTATGTCTCAATCGCTGCTTCAATGTCTTCCCCATGAATGCCGACAGCCACACGCATGA 192835 Query 107298 ACATGTATTGGGGT 107311 ||| | ||| ||| Sbjct 192836 TCATCTGTTGCGGT 192849 >seq55 Length=2050790 Score = 93.3 bits (102), Expect = 5e-14 Identities = 327/503 (65%), Gaps = 22/503 (4%) Strand=Plus/Plus Query 116986 TAGTCCCCAACTCGCTTCTCAAAGAAGTTGGTCTTCCCATCAAGGCTAATGTTTTCCATA 117045 || || ||||| |||||||| |||||||||||||| || | || |||||| ||||| Sbjct 265126 TACTCGCCAACACGCTTCTCGAAGAAGTTGGTCTTGCCGCCCAGCGAAATGTTCTCCATG 265185 Query 117046 AAGTCAAATGGATTCTTCGCGTTCCAAA-----TGGGTGGCACC--CCAACTTGTTTGAG 117098 ||||| || || || | ||||| | | | | || | ||||| || Sbjct 265186 AAGTCGAAGGGGTTGGTGGCGTTGTAGAACTTCTTGTTGCCGAGTGCCAAC-------AG 265238 Query 117099 GAGACGATCCGACACATACTCAATGTACTCGGACATCTTCTCAGAGTTCATACCGATGAG 117158 || ||||| | || | |||||||| | ||||| |||| |||||| || | || Sbjct 265239 TAGGCGATCGGCGACGAATTCAATGTATTGTGACATGAGGTCAGCGTTCATCCCCAGAAG 265298 Query 117159 ATTACATGGGAGTGCGTCCAAGATGAACCCTTTCTCAATCTCAACCGCCTCTTTCACGAT 117218 || ||||| || ||||| | |||| | | ||| ||| || ||||| | | ||| Sbjct 265299 CTTGCATGGAAGAGCGTCTGTCAAGAACTCCTGCTCGATCGTGACGGCCTCGGTGATGAT 265358 Query 117219 GGCGTGGATAGTTTC--GGTAGTGGGTCTATTACGCAAAGTCTTGAAGAGCTCCACGGCA 117276 | || | | | ||| | || | || || | | ||| || ||| Sbjct 265359 GCTCTGCACAAGGGCCTGGT--TCGGCTTGTTCTTCAGATGCGAGAACAGAAGGCAGGCG 265416 Query 117277 AACTCCTGGTGGAGACCCTCATCTCGGGAAATAAGTTCATTTGAGAAGCATAGGCCTGGC 117336 || || ||| | |||||||| ||||| || || || || ||||| || || | | Sbjct 265417 AAGTCTGTGTGCATGCCCTCATCACGGGAGATGAGCTCGTTCGAGAATGTGAGCCCGGCC 265476 Query 117337 ATGAGACCCCGCTTCTTCAACCAATAAATAGC-GCAGAATGACCCGGAGAAGAAGATACC 117395 |||||||| || ||||||| ||| | ||||| ||| || || || |||||||||||||| Sbjct 265477 ATGAGACCACGTTTCTTCAGCCAGAAGATAGCAGCAAAA-GATCCAGAGAAGAAGATACC 265535 Query 117396 CTCCACACACGCAAACGCAAAAAGGCGCTCGGCGAAGGAGCGAGACTTTGTGTCAAA-CC 117454 ||| || ||||| |||| || || |||||| | |||| |||| ||| || Sbjct 265536 CTCAACGGCGGCAAATGCAATGAGACGGAGGGCGAATG-TCGAGTTCTTGTCAGAAATCC 265594 Query 117455 ATTTCATTGCCCATTTCGCCTTC 117477 || || ||||| | |||||| Sbjct 265595 ATCGCAACGCCCAGTCAGCCTTC 265617 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 589979760158840