Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Dothistroma_20septosporum_20[genbank_20GCA_5F002236515.1_202017-07- 28] 141 sequences; 30,033,957 total letters Query= NC_015398.1 Length=101487 Score E Sequences producing significant alignments: (Bits) Value seq49 118 7e-22 >seq49 Length=732227 Score = 118 bits (130), Expect = 7e-22 Identities = 156/214 (73%), Gaps = 8/214 (4%) Strand=Plus/Plus Query 34773 ACCAAGTGAATTGTGCTTTCTTTCTGAATGTTATAGTCCGAAAGGCTTCGTTCATCATCC 34832 |||||||| | || ||||||||| ||||| ||||| || || | || |||| || Sbjct 364136 ACCAAGTGGAGAGTCGATTCTTTCTGGATGTTGTAGTCGGACAGAGTACGACCATCCTCG 364195 Query 34833 AGCTGTTTTCCGGCAAATATTAGTCGTTGCTGGTCTTGCGGCACCCCCTCCTTGTCGCTA 34892 ||||| || || ||||| || || || |||||||| | || | ||||||||||| Sbjct 364196 AGCTGCTTGCCTGCAAAAATCAGGCGCTGCTGGTCAGGTGGGATACCCTCCTTGTCCTGG 364255 Query 34893 ATCTTCTGTTTGACGGATGCTATCGAT----TCACCGGCCTCAACATCGACGGTTATGGT 34948 |||||| ||||| || | ||||| || | || ||| || |||| ||| ||||| Sbjct 364256 ATCTTCGACTTGAC--AT--TGTCGATGGTGTCGCTGGACTCGACCTCGAGGGTGATGGT 364311 Query 34949 TTTTCCCGTGAGAGTCTTCACAAAGATCTGCATA 34982 || || ||||||||||| || |||||||||||| Sbjct 364312 CTTGCCGGTGAGAGTCTTGACGAAGATCTGCATA 364345 Score = 86.0 bits (94), Expect = 4e-12 Identities = 145/210 (69%), Gaps = 0/210 (0%) Strand=Plus/Plus Query 34773 ACCAAGTGAATTGTGCTTTCTTTCTGAATGTTATAGTCCGAAAGGCTTCGTTCATCATCC 34832 |||||||| | ||| || ||||| ||||| || |||||||| | || | || || Sbjct 363908 ACCAAGTGCAGAGTGGACTCCTTCTGGATGTTGTAATCCGAAAGTGTCCGGCCGTCCTCA 363967 Query 34833 AGCTGTTTTCCGGCAAATATTAGTCGTTGCTGGTCTTGCGGCACCCCCTCCTTGTCGCTA 34892 ||||| || ||||| || || || || |||||||| | || | ||||||||||| Sbjct 363968 AGCTGCTTGCCGGCGAAGATGAGACGCTGCTGGTCCGGTGGGATGCCCTCCTTGTCTTGG 364027 Query 34893 ATCTTCTGTTTGACGGATGCTATCGATTCACCGGCCTCAACATCGACGGTTATGGTTTTT 34952 ||||| |||||| | |||| || | || || |||| || ||||| || Sbjct 364028 ATCTTTGACTTGACGTTGTCGATCGTGTCGGATGATTCCACTTCGAGTGTGATGGTCTTG 364087 Query 34953 CCCGTGAGAGTCTTCACAAAGATCTGCATA 34982 || ||||| ||||| || || || |||||| Sbjct 364088 CCGGTGAGTGTCTTGACGAAAATTTGCATA 364117 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 324633042137448