Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Dothistroma_20septosporum_20[genbank_20GCA_5F002236515.1_202017-07-
28] 141 sequences; 30,033,957 total letters
Query= NC_019491.1
Length=291144
Score E
Sequences producing significant alignments: (Bits) Value
seq80 246 6e-60
seq55 221 2e-52
>seq80
Length=246247
Score = 246 bits (272), Expect = 6e-60
Identities = 971/1508 (64%), Gaps = 47/1508 (3%)
Strand=Plus/Plus
Query 212696 GTTCAGGGACTGACTCTGGTCTATGAATGGGGCCCTGTCAGCGGCCATGTCTATGATATC 212755
||||| | |||| |||||| || || | | | |||||| ||||| | | ||| |
Sbjct 191217 GTTCAAGCTCTGAGACTGGTCGATAAAAGCACCACGGTCAGCAGCCATCTGCACGATGTT 191276
Query 212756 TCTCTGGGAGAGCTCCCACACGGTCTTGAAGATTTCTTTGAGGTCCTCTGGGAAGCCGGG 212815
| |||| || |||||| ||||||||| ||| | | |||||||| ||||| | | |||
Sbjct 191277 ACGCTGGCTGATCTCCCAGACGGTCTTGTAGAGTGCCTTGAGGTCGTCTGGAATGTTGGG 191336
Query 212816 GATGTTCTGCACAGACCCCCTGTGTATGGTCAGC--TGCAGGCG------CATGTCCTCG 212867
|||| ||| | || || || |||||| || | ||| ||||| |||
Sbjct 191337 GATGCGCTGAATGGAGCC-------ATTGTCAGCGATG-ATGCGGTTCTTCATGTTCTCT 191388
Query 212868 TTCCAGAGGCCCCTGGTCTCC-AGGCACTTGACCAGGTGAGGGTTGACTATCTGGAAGTC 212926
||||||||| | |||| | || ||| | || |||||||| | |||||| ||
Sbjct 191389 GACCAGAGGCCAC-GGTCGACGAGATCCTTCAGAAGCCATGGGTTGACGACCTGGAACTC 191447
Query 212927 ACCTGAGAGCACCCTCCTCTGGTAAAAGTTTGAAGTGTAGGGCTCGATGCTCTCGTTGTT 212986
|| | | ||| | | ||||| ||| ||||| ||||||| || ||||||
Sbjct 191448 GCCAGCCAACACACGACGAGAGTAAATGTTGCTTGTGTATGGCTCGAAGCACTCGTTAAA 191507
Query 212987 CCCCAGAATCTGTGCAGTGCTGGCTGTGGGCATGGGAGCCACCAGGAGACTGTTCCTCAC 213046
|||| ||||| | || |||||| ||||| || || || || || ||| | |||
Sbjct 191508 GCCCATGATCTGCGAGGTCGAGGCTGTTGGCATCGGCGCAACGAGAAGCGAGTTGCGCAC 191567
Query 213047 TCCGTGCTCGCCGATGAGGCGCCGAAGCTCTGCCCAGTCCCATCTGCCAGACAGGTCCTC 213106
||||||| | |||| || | || | ||||||||||| | | | |||
Sbjct 191568 ACCGTGCTGGGCGATCTTGCCCTTGAGTGCGGCCCAGTCCCAGAGGTCGGT-AGGA---- 191622
Query 213107 GTCCTTCACGTTCCACATGTCAAACTGCAAGATGCCTTTGCTCACGGGGCTGCCCTGGTA 213166
||| | | | |||||||| |||| | ||| | || || ||| ||||
Sbjct 191623 GTCTTGCCC----CACATGTCGTACTGGAGCTCGCCCTGCGATACTGGAGAGCCTGGGTA 191678
Query 213167 AGAGGAGTAGGGGCCATGCTCCTTGGCCAGCTCGCAGGACGCCTGCAGGGCAGCGTAGTA 213226
| ||| || || ||| || || |||||||| || |||| || ||||| | ||
Sbjct 191679 TGTCTCGTAAGGACCGAGCTTCTCAGCAAGCTCGCATGAAGCCTCAAGAGCAGCATGATA 191738
Query 213227 GATGGTTTCAAATATCTCCCTGTTGAGCTTCTTGGCCTCTGGGGACGTGAAGGGCATCAT 213286
|||||| ||||| |||| |||| |||| ||||||||| || || ||| |||||
Sbjct 191739 GATGGTCTCAAAAATCTGGATGTTAAGCTCCTTGGCCTCAGGCGAGTCGAATGGCATGCG 191798
Query 213287 CATGCGTTGGAACACATCAGCCAGCCCCTGGACCCCGATGCCGATGGGTCTGTGTCTCAG 213346
| ||| ||||||| || || | ||| || | || ||||||| ||| | |
Sbjct 191799 GAGAGCCAAGAAGGCATCAGCAAGACCGTTGACACCAAGACCAATGGGTCGGTGGCGGAA 191858
Query 213347 GTTAGACTTG-GAGCACTCCTCCAAGGGGTAAAAGTTGCAGTCGATGATCTTGTTGAGGT 213405
||| ||| | || ||| | ||||| ||||| |||||| ||||||| ||||
Sbjct 191859 GTTGCTCTTTCGTGC-CTCTGGTACTGGGTAGTAGTTGATCTCGATGGTCTTGTTCAGGT 191917
Query 213406 TGCGGGTGGCCACTTTGGTGACATGGGCCAGGTACTCGTGATTGAACACGTAGCCCCCGT 213465
| || ||| ||||||||||||| | | || | || | | || || | | | ||
Sbjct 191918 TACGTGTGACCACTTTGGTGACCTCGTGAAGTTTCTTGAAGTCAAAAACCTCGTTCTCGA 191977
Query 213466 CCTGCACAAACTCAGGCAGGGCGATGCTGGCCAGGTTGCAAACGGCCACCTC--CTGAGA 213523
| || | ||||| || | ||||| ||||| || || ||||| ||| ||
Sbjct 191978 TGTCGACGTAGGTGGGCAGAGCAAGCGAAGCCAGATTGCAGACAGCGACCTCATCTG-GA 192036
Query 213524 GTCTGTGTACTCCATGATCTCGGTGCACAGGTTGCTGCATCGGATGGTGCCCAGGTTCTG 213583
| | | ||||||||||||||| ||||||| || || ||||||||| || ||||
Sbjct 192037 G-CAGAGTACTCCATGATCTCAGTGCACAAATTAGAGCTCTTGATGGTGCCAAGATTCTT 192095
Query 213584 GTGGTTTGACTTTGCGTTGGCAGAATCCTTGTAGAGCATGTAGGGGGACCCGGTCTCTAG 213643
||||| ||| |||||| | |||||||| || ||| | || | ||||||||
Sbjct 192096 CTGGTTGCTCTTGCGGTTGGCGGCGTCCTTGTACAGAATGAAAGGTGTGCCGGTCTCGGT 192155
Query 213644 CTGGGACACCAGTATCTGGCTCCAGAGGTACCTGGCCTTGACCACCCGCCTGACAGCTCC 213703
||| | | | || || ||| | | | || || | ||| || || || |
Sbjct 192156 CTGCGCCTCGAGAATAGCATACCATATTTTCTGAGC----ACGAACCGTCTCACGGCCCT 192211
Query 213704 GGGCGTAGC-CTCGTACTGTTCGTAGAGCTCGTTGAATTCGTGGCCCCAGACCCTGTCCA 213762
| | | | ||| || | ||||| ||||| ||||| |||| || | || ||
Sbjct 192212 TGCCTTCTCTCTCATAACGCTCGTACAGCTCCTTGAACTCGTCACCGTAAACATCCGACA 192271
Query 213763 GTCCCGGACAGGATGCGGGACACATGAGGCTCCAGTCCCCGTCATCTCTGACTCTCTGCA 213822
| || || || ||| ||||| || |||| |||| | | ||| | |||||
Sbjct 192272 GACCAGGGCATTCGTTGGGGCACATCAGAGTCCAAGTGCCGTTCTGTTCGACACGCTGCA 192331
Query 213823 TGAACAGGTCCGGGACCCACAGCGCGGTGAACAGGTCCCTGGTCCTCCTCTCGTCCACTC 213882
| || || || || | ||| || ||| ||||| || | | | || ||| ||
Sbjct 192332 TAAAGAGATCGGGAATCCAGAGAGCGTAGAACAAATCGCGCGCACGAACTTCTTCCTTTC 192391
Query 213883 CAGAGTTTTTGCGCAGATCTAGAAAGTCAAAGATGTCCGCGTGCCACGGCTCCATGTAGA 213942
|| ||| ||||| || || | || | | || ||| || ||||||||||| | |||||
Sbjct 192392 CATGGTTCTTGCGAAGGTCCATGAACTGCATGACGTCTGCATGCCACGGCTCAAGGTAGA 192451
Query 213943 TGGCAAAGGCGCCCGGCCTCTTG---CCGCCCTGGTCCACCAGCCTGGCCACCATGTTGA 213999
||||||| || || || | |||| || |||||||| || | || ||||
Sbjct 192452 TGGCAAAAGCACCTGGACGCTTGTTGCCACCCTGGTCAACGTAACGAGCAGTGTTGTTAT 192511
Query 214000 AGATGCGCAGGACGGGTACCAGCCCGTTGGACTGT-CCGTTGGTTCCCGCTATATACGAG 214058
||| || || | ||||| || |||||||| ||| ||||| || || | || || |||
Sbjct 192512 AGACTCGTAGCATTGGTACAAGACCGTTGGA-TGTGCCGTTTGTGCCGCCAATGTATGAG 192570
Query 214059 CCGGAGGCCCTCAGGTTGCT--CATGGAGAGCCCTATGCCACCGGCGTACTTGGAGATCA 214116
|| | |||||| | |||| |||| ||| || || || || |||| |||||||||||
Sbjct 192571 CCTGTGGCCCTGATGTTGTGAACATGAAGA--CCAATACCGCCAGCGTTCTTGGAGATCA 192628
Query 214117 TGGCGCAGCGCCTCACAGTCTCCATGATGCCGGCCATGCTGTCATCTGTGAGGTTCAGCA 214176
|||| || | | | || || ||| || | ||||||||||| | | | || ||
Sbjct 192629 TGGCACATATCTTGAGGGTATCGTAGATACCATCAATGCTGTCATCCTTCATGGCCACCA 192688
Query 214177 AGAAGCAG 214184
||||||||
Sbjct 192689 AGAAGCAG 192696
>seq55
Length=2050790
Score = 221 bits (244), Expect = 2e-52
Identities = 565/854 (66%), Gaps = 16/854 (2%)
Strand=Plus/Plus
Query 47839 CTGGTAGTCCCCCACTCTATTCTCAAAGAAGTTTGTCTTCCCCTCCAACGAGATGTTCTC 47898
|||||| || || || | ||||| |||||||| ||||| || ||| ||| ||||||||
Sbjct 265122 CTGGTACTCGCCAACACGCTTCTCGAAGAAGTTGGTCTTGCCGCCCAGCGAAATGTTCTC 265181
Query 47899 CATGAAGAGGAAGGGGTTGGGTGTGTTATACACC--CGTGTCAGGCCCATCTGTTCCAGC 47956
||||||| ||||||||||| | ||| || | | | ||| ||| | || ||| |
Sbjct 265182 CATGAAGTCGAAGGGGTTGGTGGCGTTGTAGAACTTCTTGTT--GCCGA---GTGCCAAC 265236
Query 47957 AG---GTGATCCGCGACGTACTCGATGTATTTTGACATGAGGGTGATGTTCATGCCTATG 48013
|| | |||| |||||| | || ||||||| |||||||||| |||||| || |
Sbjct 265237 AGTAGGCGATCGGCGACGAATTCAATGTATTGTGACATGAGGTCAGCGTTCATCCCCAGA 265296
Query 48014 AGGGACACGGGCAAAGCCTTTGTGAGAAACTCCTTCTCTATCTGCACGGCTTCCCCCACA 48073
|| || | ||| | ||| | ||||||| ||| ||| ||||| || |
Sbjct 265297 AGCTTGCATGGAAGAGCGTCTGTCAAGAACTCCTGCTCGATCGTGACGGCCTCGGTGATG 265356
Query 48074 ATCTGCTTAACGCGGGACTCTGAGGGTTTGTTGCGCAGGTGCTTGGCATAGAGCATGCAG 48133
|| || || ||| || || ||||| ||| ||| | | || | ||||
Sbjct 265357 ATGCTCTGCACAAGGGCCTGGTTCGGCTTGTTCTTCAGATGCGAGA---ACAGAAGGCAG 265413
Query 48134 GCAAAGTCCCTGTGCAAGCCTTCGTCCCGGCTGATGAGCACGTTGGAGAAGCAGAGACCA 48193
|| ||||| |||||| ||| || || ||| ||||||| |||| ||||| ||| ||
Sbjct 265414 GCGAAGTCTGTGTGCATGCCCTCATCACGGGAGATGAGCTCGTTCGAGAATGTGAGCCCG 265473
Query 48194 GGCATGACCCCCCTCTGTTTGAGCCAGAAAATTGCCGCGAAAGAGCCAGAGAAGAAGATG 48253
| ||||| || | | || |||||||| || || || ||||| ||||||||||||||
Sbjct 265474 GCCATGAGACCACGTTTCTTCAGCCAGAAGATAGCAGCAAAAGATCCAGAGAAGAAGATA 265533
Query 48254 CCCTCCACTGCCGCGAACGCGGTGAGCCTCTCTCCGAAAGAAGCGTTCTTGTCTGAGATC 48313
||||| || || || || || |||| | |||| | | ||||||||| || |||
Sbjct 265534 CCCTCAACGGCGGCAAATGCAATGAGACGGAGGGCGAATGTCGAGTTCTTGTCAGAAATC 265593
Query 48314 CAGGAAAGCGCCCAGTCTGCCTTCTTCTTGATGCATGGCATCGTCTCTATGGCCCGGAAG 48373
|| | ||||||||| |||||| | ||||||||| || | || ||||| |||
Sbjct 265594 CATCGCAACGCCCAGTCAGCCTTCCTGCGGATGCATGGGATGTTGTCGATGGCATTGAAC 265653
Query 48374 AGCTTCTTGCACTCACCTGCGTCCGCAACATAGGTAGTGAGCAGCTTTGCGTACATCTCA 48433
|| | | | || || || | || ||| || || | || ||||
Sbjct 265654 AGGTATGTTCGCTGCTTTGGCTCGCTGATGTATGTATCGATGAGAAGGGAATATGTCTCG 265713
Query 48434 GAGTGCACATTCTCTATAGCGATCTGGAACCCGTAGAAGGCCCTGGCCTCAAACACCTGC 48493
||||| | ||||| || ||||||||| ||||||||| | ||||| | ||||
Sbjct 265714 GAGTGGATGTTCTCCATCATGATCTGGAAGCCGTAGAAGCATCGTGCCTCCGGGATCTGC 265773
Query 48494 ACTTCTGTGGAGAATCTCTCCAGCAGATTCTCATTGACTATCCCATCTGAAGCAGCAAAG 48553
|| || | | ||| | ||| | || ||||| ||||| || ||||| || || || |||
Sbjct 265774 ACCTCAGAGCTGAAGCGCTCGACGAGGTTCTCGTTGACAATGCCATCGGATGCGGCGAAG 265833
Query 48554 AAGGCAAGGACATGTTTAAGGAAATGGCGCTCGTTGTGGGTGAG-AGC--ATTCCAGCCC 48610
|| || ||||| ||| | ||| || |||| || | |||| || |||||| |
Sbjct 265834 AATGCGAGGACGTGTGAGATGAAGAATCGTTCGTCGTCGTTGAGTCGCTTGTTCCAGTCG 265893
Query 48611 TGTACGTCTTTGCCCAGGTCCACTTCTTCCACAGTCCAGAAGGACGCGAGTGCTTTTTTG 48670
|| | || || ||| || | || || | |||||||| || || || ||||||
Sbjct 265894 TGGAGATCCTTCGACAGATCAATCTCCTCAGCTGTCCAGAATGAGGCCTCGGCCTTTTTG 265953
Query 48671 TACATGCCCCATAT 48684
||||| ||||||
Sbjct 265954 TACATTTGCCATAT 265967
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 931531158173440
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |