Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Dothistroma_20septosporum_20[genbank_20GCA_5F002236515.1_202017-07-
28] 141 sequences; 30,033,957 total letters
Query= NC_019495.1
Length=290304
Score E
Sequences producing significant alignments: (Bits) Value
seq55 179 7e-40
seq80 154 3e-32
>seq55
Length=2050790
Score = 179 bits (198), Expect = 7e-40
Identities = 563/863 (65%), Gaps = 36/863 (4%)
Strand=Plus/Minus
Query 25477 ATATGGGAGATGTACAAGAAGGCTCAAAACTCAAACTGGACCGCCGAAGAGATTGATCTG 25536
|||||| | |||||||| ||||| | |||| |||||| || || ||||||||||||
Sbjct 265967 ATATGGCAAATGTACAAAAAGGCCGAGGCCTCATTCTGGACAGCTGAGGAGATTGATCTG 265908
Query 25537 GCCAAGGACATGGACGGCTGGTACGCTCTATCCAAAGACGA-GCAGCATT-TTC-TCAAG 25593
| ||||| | ||| |||| || | | ||| ||||| | | ||| ||| ||
Sbjct 265907 TCGAAGGATCTCCACGACTGGAACAAGCGACTCAACGACGACGAACGATTCTTCATCTCA 265848
Query 25594 TACGTGTTGGCATTCTTTGCAGCCTCTGATGGTATAGTGAACGAGAATCTGTGCGAGAGA 25653
|||| | |||||||| || || || ||||| || || |||||||| || |||| |
Sbjct 265847 CACGTCCTCGCATTCTTCGCCGCATCCGATGGCATTGTCAACGAGAACCTCGTCGAGCGC 265788
Query 25654 TTCACCAGGGAAGTGCAGTACGTGGAGGCCAAGTGTTTCTACGGTTTCCAGATGGCCATC 25713
|||| | || |||||| | |||||| || |||||||| |||||||| ||
Sbjct 265787 TTCAGCTCTGAGGTGCAGATCCCGGAGGCACGATGCTTCTACGGCTTCCAGATCATGATG 265728
Query 25714 GAAAATGTGCACTCTGAGGTGTATGCCAAGCTTCTGAT---GACGTACATTA--CAGACG 25768
|| || | ||||| ||| ||| || ||||| || || ||||| | || |
Sbjct 265727 GAGAACATCCACTCCGAGACATATTCC---CTTCTCATCGATACATACATCAGCGAGCCA 265671
Query 25769 TCGCCGAGAGAGATCGGCTGTTTGGTGCCATCGAGCACATACCCAGCATCAAGAGGAAGG 25828
|| | || | || ||||| ||||||||| |||| || ||||| |||||||
Sbjct 265670 AAGCAGCGA-ACAT-ACCTGTTCAATGCCATCGACAACATCCCATGCATCCGCAGGAAGG 265613
Query 25829 CGCGGTGGGCCATGAAGTGGATCAACAGCCAGAGCGCTACGTTTGGCGAGCGGCTGGTAG 25888
| ||||| || ||||| | ||| | | || || | | || || | |
Sbjct 265612 CTGACTGGGCGTTGCGATGGATTTCTGACAAGAACTCGACATTCGCCCTCCGTCTCATTG 265553
Query 25889 CCTTTGCTGCTGTGGAGGGCATCTTTTTCAGCGGTTCGTTTGCGGCCATCTTCTGGCTCA 25948
| ||||| || || ||||| ||||| ||| || || ||||| || ||||||||||| |
Sbjct 265552 CATTTGCCGCCGTTGAGGGTATCTTCTTCTCTGGATCTTTTGCTGCTATCTTCTGGCTGA 265493
Query 25949 AGCAGAAGGGGAC-CATGCCCGGGCTGTACTTTTCCAACGAGCTCATCAGCAGGGACGAG 26007
|| | | | || | |||| ||||||| || || |||||||||||| | | || |||
Sbjct 265492 AG-AAACGTGGTCTCATGGCCGGGCTCACATTCTCGAACGAGCTCATCTCCCGTGATGAG 265434
Query 26008 GGTCTCCACAGAGATTTTGCCTGCCTGCTCTACACGGGCCACTTGCTCCACAAACCTTCT 26067
|| | |||| ||| || |||||||| || | | || || || |||| ||
Sbjct 265433 GGCATGCACACAGACTTCGCCTGCCTTCTGTTCTCG---CATCTGAAGAACAAGCCGAAC 265377
Query 26068 CAAGAGACCGTCTACAGTATCATCAAAGAGGCTGTGGAGATCGAGAAGGAGTTTCNNNNN 26127
|| | || | || ||||||| ||||| || ||||||| |||||||
Sbjct 265376 CAGGCCCTTGTGCAGAGCATCATCACCGAGGCCGTCACGATCGAGCAGGAGTTCTTGACA 265317
Query 26128 NNNNNNNNNNNNNNNNNNNNNNTGGGCATGAACAACAGA-CTCATGAGCCAATACATTGA 26186
|||| |||||| | || |||||| |||||||||||
Sbjct 265316 GACGCTCTTCCATGCAAGCTTCTGGGGATGAAC-GCTGACCTCATGTCACAATACATTGA 265258
Query 26187 GTATGTGGCCGACCATCTGCTGTGCCAGCTGGGACTCG----CCAGA--CTCTACAGTAC 26240
| || ||||| | || |||| ||| ||||| | ||| |||||| ||
Sbjct 265257 ATTCGTCGCCGATCGCCTACTGT------TGGCACTCGGCAACAAGAAGTTCTACA--AC 265206
Query 26241 GC--CTAACCCGTTCGACTTTATGGAAAACATATCGTTGGAAGGGAAGACCAACTTCTTT 26298
|| | ||||| |||||||| ||||| ||||| ||| ||| || ||||||||||||||
Sbjct 265205 GCCACCAACCCCTTCGACTTCATGGAGAACATTTCGCTGGGCGGCAAGACCAACTTCTTC 265146
Query 26299 GAAAAGAGGGTCGGCGACTATCA 26321
|| ||| | || ||||| || ||
Sbjct 265145 GAGAAGCGTGTTGGCGAGTACCA 265123
>seq80
Length=246247
Score = 154 bits (170), Expect = 3e-32
Identities = 665/1035 (64%), Gaps = 51/1035 (5%)
Strand=Plus/Plus
Query 221371 GTACGACTCGTAGGGACCGTACAGTTCGGCCTGGGCGCAAGACTGCGTCAGG-GCAGCGT 221429
||| | |||||| |||||| | || || | |||| || || ||| | ||||| |
Sbjct 191676 GTATGTCTCGTAAGGACCGAGCTTCTCAGCAAGCTCGCATGAA-GCCTCAAGAGCAGCAT 191734
Query 221430 GGTAGATGGTCTCAAAGATCATCTTGTTGAGTCTCTTGGCCTCGGGAGAAGTGAAGGGCA 221489
| |||||||||||||| ||| |||| || ||||||||| || || ||| ||||
Sbjct 191735 GATAGATGGTCTCAAAAATCTGGATGTTAAGCTCCTTGGCCTCAGGCGAGTCGAATGGCA 191794
Query 221490 TACGCAGCATCTGAAAGACGTCGGCCAGTCCCTGTACTCCGATACCGATGGGCCTGTGTC 221549
| || || | ||| | || || || || | || || | ||| ||||| | ||| |
Sbjct 191795 TGCGGAGAGCCAAGAAGGCATCAGCAAGACCGTTGACACCAAGACCAATGGGTCGGTGGC 191854
Query 221550 TCCTGTTGGAAGCGGCCGCTTCTGGCACGGGATAAAAGTTGACGTCGATCAGATTGTTGA 221609
|||| || ||||| || || || |||||| ||||| ||||| |
Sbjct 191855 GGAAGTTGCTCTTTCGTGCCTCTGGTACTGGGTAGTAGTTGATCTCGATGGTCTTGTTCA 191914
Query 221610 GGTTCAGAGTGATGACTTTAACCACCTCGGTCAGCTTCTGGTGATTGAACACCAA---CT 221666
|||| | |||| ||||| |||||| || |||| | | || ||| ||
Sbjct 191915 GGTTACGTGTGACCACTTTGGTGACCTCGTGAAGTTTCTTGAAGTCAAAAACCTCGTTCT 191974
Query 221667 CGCCGCCGTCGTGGAGGGGTTCCACAA-AAGCGTTTAGGGCAACGCTGGCCAGGTTACAC 221725
|| | || ||| | ||| || | ||||| || ||||| || ||
Sbjct 191975 CGATGTCGACGTAGGTGGG---CAGAGCAAGCG--------AA-----GCCAGATTGCAG 192018
Query 221726 ACGGCCACCTCGTCCTTGTTG--GTATACTGTATGATCTCTGTACAGAGGTTGCTGCACT 221783
|| || ||||| || || | | |||| |||||||| || || | || || ||
Sbjct 192019 ACAGCGACCTCATC--TGGAGCAGAGTACTCCATGATCTCAGTGCACAAATTAGAGCTCT 192076
Query 221784 TGATGGTCCCCAGGTGATTGTGATTAGACTTGCGATTGGCAGCGTCCTTGTAGAGCATAA 221843
||||||| || || | || || || |||||| ||||| ||||||||||| || || |
Sbjct 192077 TGATGGTGCCAAGATTCTTCTGGTTGCTCTTGCGGTTGGCGGCGTCCTTGTACAGAATGA 192136
Query 221844 AGGGACCGCCAGTCTCCAGCTGAGCCACCAGAATCTTGTCCCAGAGTTCTCTG-GCGCTC 221902
| || ||| ||||| ||| ||| | ||||| | ||| | || |||| || |
Sbjct 192137 AAGGTGTGCCGGTCTCGGTCTGCGCCTCGAGAATAGCATACCATATTT-TCTGAGCACGA 192195
Query 221903 ACCGTCCTCTTGACTGCACCCTCGGTCTTT-TCATACCCGGTATAGAGCATGTCAAACTT 221961
|||||| | || || | | ||| | ||||| | || ||| | ||||
Sbjct 192196 ACCGTC----TCACGGCCCTTGCCTTCTCTCTCATAACGCTCGTACAGCTCCTTGAACTC 192251
Query 221962 TTCACCGTACGCCTCGTCCAGGCCTGGACACCTGGCGGGACACATCAGACTCCA-GTGCT 222020
|||||||| | || ||| || || || | ||| ||||||||| |||| ||||
Sbjct 192252 GTCACCGTAAACATCCGACAGACCAGGGCATTCGTTGGGGCACATCAGAGTCCAAGTGCC 192311
Query 222021 TGTTGTCTTTGACCCTCTGCATGAAGAGGTCCGGGATCCACAGCGCCTGAAAGAGATCTC 222080
||| | || ||| | |||||| ||||| || || ||||| || || | || | ||| |
Sbjct 192312 -GTTCTGTTCGACACGCTGCATAAAGAGATCGGGAATCCAGAGAGCGTAGAACAAATCGC 192370
Query 222081 TGGTCCGCTGCTCCTCCACGCCGTTGTTTTTCCTCAGATCCAAAAACTCAAAAATGTCAG 222140
| || || ||| || | ||| || | || |||| |||| | | ||| |
Sbjct 192371 GCGCACGAACTTCTTCCTTTCCATGGTTCTTGCGAAGGTCCATGAACTGCATGACGTCTG 192430
Query 222141 CGTGCCACGGCTCCAGATAGACGGCCAGAGCGCCGGGTCGCTTGTTGCCACCCTGATCCA 222200
| ||||||||||| || |||| ||| | ||| || || ||||||||||||||||| |
Sbjct 192431 CATGCCACGGCTCAAGGTAGATGGCAAAAGCACCTGGACGCTTGTTGCCACCCTGGT--- 192487
Query 222201 CCATCCTCTCCAG-AGCGTTG---AAGATGCGAAGGGTCGGTACCAGTCCGTTGGATCGA 222256
|| | | | || || |||| ||| || || | ||||| || |||||||||
Sbjct 192488 -CAACGTAACGAGCAGTGTTGTTATAGACTCGTAGCATTGGTACAAGACCGTTGGATGTG 192546
Query 222257 CCGTTGGTGCCCTTAATGTACGCACCGCCGGCCCTCAGGTT----ACTGGCAGACATGCC 222312
||||| ||||| |||||| | || |||||| | ||| || | ||| ||
Sbjct 192547 CCGTTTGTGCCGCCAATGTATGAGCCTGTGGCCCTGATGTTGTGAACATGAAGA----CC 192602
Query 222313 GATACCACCGGCGTGTTTCGAGATCATGGCGCAGCTCTTGAGAGTGTCCATGATGCCCTC 222372
||||| || |||| || ||||||||||| || ||||||| || || ||| || ||
Sbjct 192603 AATACCGCCAGCGTTCTTGGAGATCATGGCACATATCTTGAGGGTATCGTAGATACCATC 192662
Query 222373 CATAGAGTCCTCCTT 222387
|| ||| |||||
Sbjct 192663 AATGCTGTCATCCTT 192677
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 928843162911040
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |