Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Dothistroma_20septosporum_20[genbank_20GCA_5F002236515.1_202017-07- 28] 141 sequences; 30,033,957 total letters Query= NC_019495.1 Length=290304 Score E Sequences producing significant alignments: (Bits) Value seq55 179 7e-40 seq80 154 3e-32 >seq55 Length=2050790 Score = 179 bits (198), Expect = 7e-40 Identities = 563/863 (65%), Gaps = 36/863 (4%) Strand=Plus/Minus Query 25477 ATATGGGAGATGTACAAGAAGGCTCAAAACTCAAACTGGACCGCCGAAGAGATTGATCTG 25536 |||||| | |||||||| ||||| | |||| |||||| || || |||||||||||| Sbjct 265967 ATATGGCAAATGTACAAAAAGGCCGAGGCCTCATTCTGGACAGCTGAGGAGATTGATCTG 265908 Query 25537 GCCAAGGACATGGACGGCTGGTACGCTCTATCCAAAGACGA-GCAGCATT-TTC-TCAAG 25593 | ||||| | ||| |||| || | | ||| ||||| | | ||| ||| || Sbjct 265907 TCGAAGGATCTCCACGACTGGAACAAGCGACTCAACGACGACGAACGATTCTTCATCTCA 265848 Query 25594 TACGTGTTGGCATTCTTTGCAGCCTCTGATGGTATAGTGAACGAGAATCTGTGCGAGAGA 25653 |||| | |||||||| || || || ||||| || || |||||||| || |||| | Sbjct 265847 CACGTCCTCGCATTCTTCGCCGCATCCGATGGCATTGTCAACGAGAACCTCGTCGAGCGC 265788 Query 25654 TTCACCAGGGAAGTGCAGTACGTGGAGGCCAAGTGTTTCTACGGTTTCCAGATGGCCATC 25713 |||| | || |||||| | |||||| || |||||||| |||||||| || Sbjct 265787 TTCAGCTCTGAGGTGCAGATCCCGGAGGCACGATGCTTCTACGGCTTCCAGATCATGATG 265728 Query 25714 GAAAATGTGCACTCTGAGGTGTATGCCAAGCTTCTGAT---GACGTACATTA--CAGACG 25768 || || | ||||| ||| ||| || ||||| || || ||||| | || | Sbjct 265727 GAGAACATCCACTCCGAGACATATTCC---CTTCTCATCGATACATACATCAGCGAGCCA 265671 Query 25769 TCGCCGAGAGAGATCGGCTGTTTGGTGCCATCGAGCACATACCCAGCATCAAGAGGAAGG 25828 || | || | || ||||| ||||||||| |||| || ||||| ||||||| Sbjct 265670 AAGCAGCGA-ACAT-ACCTGTTCAATGCCATCGACAACATCCCATGCATCCGCAGGAAGG 265613 Query 25829 CGCGGTGGGCCATGAAGTGGATCAACAGCCAGAGCGCTACGTTTGGCGAGCGGCTGGTAG 25888 | ||||| || ||||| | ||| | | || || | | || || | | Sbjct 265612 CTGACTGGGCGTTGCGATGGATTTCTGACAAGAACTCGACATTCGCCCTCCGTCTCATTG 265553 Query 25889 CCTTTGCTGCTGTGGAGGGCATCTTTTTCAGCGGTTCGTTTGCGGCCATCTTCTGGCTCA 25948 | ||||| || || ||||| ||||| ||| || || ||||| || ||||||||||| | Sbjct 265552 CATTTGCCGCCGTTGAGGGTATCTTCTTCTCTGGATCTTTTGCTGCTATCTTCTGGCTGA 265493 Query 25949 AGCAGAAGGGGAC-CATGCCCGGGCTGTACTTTTCCAACGAGCTCATCAGCAGGGACGAG 26007 || | | | || | |||| ||||||| || || |||||||||||| | | || ||| Sbjct 265492 AG-AAACGTGGTCTCATGGCCGGGCTCACATTCTCGAACGAGCTCATCTCCCGTGATGAG 265434 Query 26008 GGTCTCCACAGAGATTTTGCCTGCCTGCTCTACACGGGCCACTTGCTCCACAAACCTTCT 26067 || | |||| ||| || |||||||| || | | || || || |||| || Sbjct 265433 GGCATGCACACAGACTTCGCCTGCCTTCTGTTCTCG---CATCTGAAGAACAAGCCGAAC 265377 Query 26068 CAAGAGACCGTCTACAGTATCATCAAAGAGGCTGTGGAGATCGAGAAGGAGTTTCNNNNN 26127 || | || | || ||||||| ||||| || ||||||| ||||||| Sbjct 265376 CAGGCCCTTGTGCAGAGCATCATCACCGAGGCCGTCACGATCGAGCAGGAGTTCTTGACA 265317 Query 26128 NNNNNNNNNNNNNNNNNNNNNNTGGGCATGAACAACAGA-CTCATGAGCCAATACATTGA 26186 |||| |||||| | || |||||| ||||||||||| Sbjct 265316 GACGCTCTTCCATGCAAGCTTCTGGGGATGAAC-GCTGACCTCATGTCACAATACATTGA 265258 Query 26187 GTATGTGGCCGACCATCTGCTGTGCCAGCTGGGACTCG----CCAGA--CTCTACAGTAC 26240 | || ||||| | || |||| ||| ||||| | ||| |||||| || Sbjct 265257 ATTCGTCGCCGATCGCCTACTGT------TGGCACTCGGCAACAAGAAGTTCTACA--AC 265206 Query 26241 GC--CTAACCCGTTCGACTTTATGGAAAACATATCGTTGGAAGGGAAGACCAACTTCTTT 26298 || | ||||| |||||||| ||||| ||||| ||| ||| || |||||||||||||| Sbjct 265205 GCCACCAACCCCTTCGACTTCATGGAGAACATTTCGCTGGGCGGCAAGACCAACTTCTTC 265146 Query 26299 GAAAAGAGGGTCGGCGACTATCA 26321 || ||| | || ||||| || || Sbjct 265145 GAGAAGCGTGTTGGCGAGTACCA 265123 >seq80 Length=246247 Score = 154 bits (170), Expect = 3e-32 Identities = 665/1035 (64%), Gaps = 51/1035 (5%) Strand=Plus/Plus Query 221371 GTACGACTCGTAGGGACCGTACAGTTCGGCCTGGGCGCAAGACTGCGTCAGG-GCAGCGT 221429 ||| | |||||| |||||| | || || | |||| || || ||| | ||||| | Sbjct 191676 GTATGTCTCGTAAGGACCGAGCTTCTCAGCAAGCTCGCATGAA-GCCTCAAGAGCAGCAT 191734 Query 221430 GGTAGATGGTCTCAAAGATCATCTTGTTGAGTCTCTTGGCCTCGGGAGAAGTGAAGGGCA 221489 | |||||||||||||| ||| |||| || ||||||||| || || ||| |||| Sbjct 191735 GATAGATGGTCTCAAAAATCTGGATGTTAAGCTCCTTGGCCTCAGGCGAGTCGAATGGCA 191794 Query 221490 TACGCAGCATCTGAAAGACGTCGGCCAGTCCCTGTACTCCGATACCGATGGGCCTGTGTC 221549 | || || | ||| | || || || || | || || | ||| ||||| | ||| | Sbjct 191795 TGCGGAGAGCCAAGAAGGCATCAGCAAGACCGTTGACACCAAGACCAATGGGTCGGTGGC 191854 Query 221550 TCCTGTTGGAAGCGGCCGCTTCTGGCACGGGATAAAAGTTGACGTCGATCAGATTGTTGA 221609 |||| || ||||| || || || |||||| ||||| ||||| | Sbjct 191855 GGAAGTTGCTCTTTCGTGCCTCTGGTACTGGGTAGTAGTTGATCTCGATGGTCTTGTTCA 191914 Query 221610 GGTTCAGAGTGATGACTTTAACCACCTCGGTCAGCTTCTGGTGATTGAACACCAA---CT 221666 |||| | |||| ||||| |||||| || |||| | | || ||| || Sbjct 191915 GGTTACGTGTGACCACTTTGGTGACCTCGTGAAGTTTCTTGAAGTCAAAAACCTCGTTCT 191974 Query 221667 CGCCGCCGTCGTGGAGGGGTTCCACAA-AAGCGTTTAGGGCAACGCTGGCCAGGTTACAC 221725 || | || ||| | ||| || | ||||| || ||||| || || Sbjct 191975 CGATGTCGACGTAGGTGGG---CAGAGCAAGCG--------AA-----GCCAGATTGCAG 192018 Query 221726 ACGGCCACCTCGTCCTTGTTG--GTATACTGTATGATCTCTGTACAGAGGTTGCTGCACT 221783 || || ||||| || || | | |||| |||||||| || || | || || || Sbjct 192019 ACAGCGACCTCATC--TGGAGCAGAGTACTCCATGATCTCAGTGCACAAATTAGAGCTCT 192076 Query 221784 TGATGGTCCCCAGGTGATTGTGATTAGACTTGCGATTGGCAGCGTCCTTGTAGAGCATAA 221843 ||||||| || || | || || || |||||| ||||| ||||||||||| || || | Sbjct 192077 TGATGGTGCCAAGATTCTTCTGGTTGCTCTTGCGGTTGGCGGCGTCCTTGTACAGAATGA 192136 Query 221844 AGGGACCGCCAGTCTCCAGCTGAGCCACCAGAATCTTGTCCCAGAGTTCTCTG-GCGCTC 221902 | || ||| ||||| ||| ||| | ||||| | ||| | || |||| || | Sbjct 192137 AAGGTGTGCCGGTCTCGGTCTGCGCCTCGAGAATAGCATACCATATTT-TCTGAGCACGA 192195 Query 221903 ACCGTCCTCTTGACTGCACCCTCGGTCTTT-TCATACCCGGTATAGAGCATGTCAAACTT 221961 |||||| | || || | | ||| | ||||| | || ||| | |||| Sbjct 192196 ACCGTC----TCACGGCCCTTGCCTTCTCTCTCATAACGCTCGTACAGCTCCTTGAACTC 192251 Query 221962 TTCACCGTACGCCTCGTCCAGGCCTGGACACCTGGCGGGACACATCAGACTCCA-GTGCT 222020 |||||||| | || ||| || || || | ||| ||||||||| |||| |||| Sbjct 192252 GTCACCGTAAACATCCGACAGACCAGGGCATTCGTTGGGGCACATCAGAGTCCAAGTGCC 192311 Query 222021 TGTTGTCTTTGACCCTCTGCATGAAGAGGTCCGGGATCCACAGCGCCTGAAAGAGATCTC 222080 ||| | || ||| | |||||| ||||| || || ||||| || || | || | ||| | Sbjct 192312 -GTTCTGTTCGACACGCTGCATAAAGAGATCGGGAATCCAGAGAGCGTAGAACAAATCGC 192370 Query 222081 TGGTCCGCTGCTCCTCCACGCCGTTGTTTTTCCTCAGATCCAAAAACTCAAAAATGTCAG 222140 | || || ||| || | ||| || | || |||| |||| | | ||| | Sbjct 192371 GCGCACGAACTTCTTCCTTTCCATGGTTCTTGCGAAGGTCCATGAACTGCATGACGTCTG 192430 Query 222141 CGTGCCACGGCTCCAGATAGACGGCCAGAGCGCCGGGTCGCTTGTTGCCACCCTGATCCA 222200 | ||||||||||| || |||| ||| | ||| || || ||||||||||||||||| | Sbjct 192431 CATGCCACGGCTCAAGGTAGATGGCAAAAGCACCTGGACGCTTGTTGCCACCCTGGT--- 192487 Query 222201 CCATCCTCTCCAG-AGCGTTG---AAGATGCGAAGGGTCGGTACCAGTCCGTTGGATCGA 222256 || | | | || || |||| ||| || || | ||||| || ||||||||| Sbjct 192488 -CAACGTAACGAGCAGTGTTGTTATAGACTCGTAGCATTGGTACAAGACCGTTGGATGTG 192546 Query 222257 CCGTTGGTGCCCTTAATGTACGCACCGCCGGCCCTCAGGTT----ACTGGCAGACATGCC 222312 ||||| ||||| |||||| | || |||||| | ||| || | ||| || Sbjct 192547 CCGTTTGTGCCGCCAATGTATGAGCCTGTGGCCCTGATGTTGTGAACATGAAGA----CC 192602 Query 222313 GATACCACCGGCGTGTTTCGAGATCATGGCGCAGCTCTTGAGAGTGTCCATGATGCCCTC 222372 ||||| || |||| || ||||||||||| || ||||||| || || ||| || || Sbjct 192603 AATACCGCCAGCGTTCTTGGAGATCATGGCACATATCTTGAGGGTATCGTAGATACCATC 192662 Query 222373 CATAGAGTCCTCCTT 222387 || ||| ||||| Sbjct 192663 AATGCTGTCATCCTT 192677 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 928843162911040