Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Dothistroma_20septosporum_20[genbank_20GCA_5F002236515.1_202017-07-
28] 141 sequences; 30,033,957 total letters
Query= NC_021312.1
Length=459984
Score E
Sequences producing significant alignments: (Bits) Value
seq80 158 4e-33
seq66 118 3e-21
seq92 96.9 1e-14
seq55 86.0 2e-11
>seq80
Length=246247
Score = 158 bits (174), Expect = 4e-33
Identities = 559/867 (64%), Gaps = 11/867 (1%)
Strand=Plus/Plus
Query 155640 ATCTCACAGCACAGGTTAGAACTCTTGATGGTGCCTAAATTCTTCTGGTTAGATTTACTG 155699
|||||| ||||| ||||| |||||||||||||| | |||||||||||| || | |
Sbjct 192052 ATCTCAGTGCACAAATTAGAGCTCTTGATGGTGCCAAGATTCTTCTGGTTGCTCTTGCGG 192111
Query 155700 TTACAAGCATCCTTGTATAGAATGTATGGGGTTCCTGTCTCCATCTGTGCGTCCAGAATC 155759
|| || |||||||| |||||| | || || || ||||| |||| || || |||||
Sbjct 192112 TTGGCGGCGTCCTTGTACAGAATGAAAGGTGTGCCGGTCTCGGTCTGCGCCTCGAGAATA 192171
Query 155760 TTTAGCCAGAGGTCACGGGCATTAATTTGCTTGTTGTATCTGCCTTCCGACTCATATTTC 155819
||| | | | ||| || || | ||||||| |||||| |
Sbjct 192172 GCATACCATATTTTCTGAGCACGAACCGTCTCACGGCCCTTGCCTTCTCTCTCATAACGC 192231
Query 155820 ATATACAGCGTTCGGTAATCCTCACCGTAACAATCACTCAGTCCAGGGCACTTATCGGGG 155879
|||||| | | || ||||||||| ||| ||| |||||||| | | ||||
Sbjct 192232 TCGTACAGCTCCTTGAACTCGTCACCGTAAACATCCGACAGACCAGGGCATTCGTTGGGG 192291
Query 155880 CAAAACAGCGACCAAATTTTATTACCGATT-ACACGCTCCATAAATACATCACTCGCCCA 155938
|| | ||| | |||| | || | | | ||||||| |||||| | ||| |||
Sbjct 192292 CACATCAGAGTCCAAGTGCCGTT-CTGTTCGACACGCTGCATAAAGAGATCGGGAATCCA 192350
Query 155939 AATAGCATAGAAAAGGTCCCTTGCCTTTGACTCCTCATCGCCGTGATTCTTCCGTAGCTC 155998
| ||| ||||| | || | || || || | || || ||||| || || ||
Sbjct 192351 GAGAGCGTAGAACAAATCGCGCGCACGAACTTCTTCCTTTCCATGGTTCTTGCGAAGGTC 192410
Query 155999 TAAGAATTCCTCAATATCAGGATGGTGTGGCTCCAGATACATAGCAAAACTACC---ATT 156055
| ||| | | | || | ||| ||||| || || || |||||| ||| |
Sbjct 192411 CATGAACTGCATGACGTCTGCATGCCACGGCTCAAGGTAGATGGCAAAAGCACCTGGACG 192470
Query 156056 CCTCTTGCCACCCTGATCTACATACCGAGCAGTCTTATTGAAGACACCTAGCATAGGAAT 156115
| | ||||||||||| || || || |||||||| || || |||| | |||||| || |
Sbjct 192471 CTTGTTGCCACCCTGGTCAACGTAACGAGCAGTGTTGTTATAGACTCGTAGCATTGGTAC 192530
Query 156116 AATACCATTGGAAGTGCCATTGGTTCCGCGAATATGCGAACCAGATGAGCGAACATTATG 156175
|| ||| ||||| ||||| || || |||| ||| | || || | | | | || ||
Sbjct 192531 AAGACCGTTGGATGTGCCGTTTGTGCCGCCAATGTATGAGCCTGTGGCCCTGATGTTGTG 192590
Query 156176 AATATGTAGTCCAATACCACCTGACCATTTAGAAATTTGAGCGCATTCCTTTACAGTATT 156235
|| ||| || |||||||| || | || || || || ||| ||| | ||||
Sbjct 192591 AACATGAAGACCAATACCGCCAGCGTTCTTGGAGATCATGGCACATATCTTGAGGGTATC 192650
Query 156236 GAAAATACCTTCAATAGAATCATCTTCCATTGATAGTAGATAGCACGAACTTAATTGAGG 156295
| | ||||| ||||| ||||| | ||| | | | |||| || || || |
Sbjct 192651 GTAGATACCATCAATGCTGTCATCCTTCATGGCCACCAAGAAGCAGGATGCTAGCTGCGC 192710
Query 156296 TCGTGGTGTTCCAGCGTTGAATAGTGTAGGTGTTGCATGAATAAAATACTTATTAGACAT 156355
|||| || ||||| |||| ||||| || | ||||| | || ||||| |||||
Sbjct 192711 CTGTGGGGTACCAGCACTGAAAAGTGTTGGCGAAGCATGTGTGAAGTACTTCAACGACAT 192770
Query 156356 ATAATCGTATGTCTCCTTAAT--CTTC-TCAAGATTAGACCCGTGAATACAGATAGAGAC 156412
|| | ||||||||| ||| || | |||| | ||| ||||| | || || ||
Sbjct 192771 GTAGTTGTATGTCTC---AATCGCTGCTTCAATGTCTTCCCCATGAATGCCGACAGCCAC 192827
Query 156413 CCTCATCCACATATGCTGAGGACGCTCTACAATCACTCCATCAATTCGCAGAAGGTATGC 156472
| ||| ||| || || || | ||| ||| | || ||||||| ||||||||||
Sbjct 192828 ACGCATGATCATCTGTTGCGGTCTCTCGGCAACCTTGCCGTCAATTCTGAGAAGGTATGA 192887
Query 156473 GCGTTCCAGAGTTTTAAACCCGAAATA 156499
|| |||||||| || || ||||| ||
Sbjct 192888 TCGCTCCAGAGTCTTGAAGCCGAAGTA 192914
>seq66
Length=1368509
Score = 118 bits (130), Expect = 3e-21
Identities = 173/241 (72%), Gaps = 4/241 (2%)
Strand=Plus/Minus
Query 302563 ATCATAATGTCTTCCATACTCTTGATTAAACGACGCTGAATATAACCAGTTGTAGATGTT 302622
||||| | ||||||| | ||| | || ||||||||| || |||||||| | ||
Sbjct 1131005 ATCATGACTTCTTCCAAAGCCTTCACTAGACGACGCTGGATGTAACCAGTCTCTGCAGTC 1130946
Query 302623 TTTACAGCTGTATCAATTAGACCAACACGACCACCCATAGCATGGAAGAATAGCTCTTCC 302682
|| ||||| |||||||| ||||| ||||||||||||| || |||||||| | |||||
Sbjct 1130945 TTGACAGCGGTATCAATGAGACCTTCACGACCACCCATGGCGTGGAAGAAGAACTCTTGG 1130886
Query 302683 GGTCGT--AGCCCCCCAATAAAGGAGCTCTCAACGAAACCACGCGCCTCGGGCGAATCGT 302740
||| || |||| | | | | ||| |||| |||||||| | | | ||||| | ||
Sbjct 1130885 GGT-GTCAAGCCACGC-AGGTATGAGTTCTCGACGAAACCTCTAGATGCAGGCGAGTAGT 1130828
Query 302741 CGAACTTGGTAAAGTGTGGCAGGGTCCTGTTCTCATAGCCGTATGGGATACGCTTTCCAT 302800
|| ||||| ||| || |||||| | || || ||||| | |||| |||||| || |
Sbjct 1130827 CGTCCTTGGGAAAATGCGGCAGGACTCGGTACTTGAAGCCGAACGGGAGACGCTTGCCTT 1130768
Query 302801 C 302801
|
Sbjct 1130767 C 1130767
>seq92
Length=155477
Score = 96.9 bits (106), Expect = 1e-14
Identities = 113/150 (75%), Gaps = 2/150 (1%)
Strand=Plus/Minus
Query 251839 TGGGCGATAGTCATACGACTGGGAATAGCATGGGGATTGATGATGATGTCGGGTTTCAGT 251898
|| || || |||||||| |||||| || || || |||||||| ||||| ||| | ||
Sbjct 17235 TGAGCAATTGTCATACGCGAGGGAATGGCGTGAGGGTTGATGATAATGTCCGGTGTGAGG 17176
Query 251899 CCATCAGCAGTGAAGGGCATATCCTTTTCCTCAATAA-TGTTTCCAATAGTTCCCTTTTG 251957
|| || || ||||| ||||| || | || || ||| || | |||| || ||||| ||
Sbjct 17175 CCGTCCGCTGTGAATGGCATGTCTTCTTG-TCGATAGGTGATACCAACGGTACCCTTCTG 17117
Query 251958 TCCGTGACGAGAACTGAACTTATCACCAAT 251987
|||||||||||| ||||||||||||||
Sbjct 17116 TCCGTGACGAGATGCAAACTTATCACCAAT 17087
>seq55
Length=2050790
Score = 86.0 bits (94), Expect = 2e-11
Identities = 88/115 (77%), Gaps = 0/115 (0%)
Strand=Plus/Plus
Query 302573 CTTCCATACTCTTGATTAAACGACGCTGAATATAACCAGTTGTAGATGTTTTTACAGCTG 302632
||||||| | |||||| |||| | ||| | || |||| | ||| ||||| || ||||
Sbjct 1233298 CTTCCATGCCCTTGATCAAACATCTCTGCAGGTATCCAGATCGAGACGTTTTGACTGCTG 1233357
Query 302633 TATCAATTAGACCAACACGACCACCCATAGCATGGAAGAATAGCTCTTCCGGTCG 302687
||||||| ||||| | |||||| ||||||| |||||||| ||||| |||||
Sbjct 1233358 TATCAATGAGACCTTCGCGACCAGCCATAGCGTGGAAGAAGTACTCTTGAGGTCG 1233412
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 1471814941069517
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |