Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Dothistroma_20septosporum_20[genbank_20GCA_5F002236515.1_202017-07-
28] 141 sequences; 30,033,957 total letters
Query= NC_022098.1
Length=2473870
Score E
Sequences producing significant alignments: (Bits) Value
seq62 150 3e-30
seq55 143 4e-28
seq22 118 2e-20
seq80 89.7 8e-12
seq130 86.0 1e-10
>seq62
Length=449201
Score = 150 bits (166), Expect = 3e-30
Identities = 176/235 (75%), Gaps = 2/235 (1%)
Strand=Plus/Plus
Query 1485471 GTACTTGGTGACGGCCTTGGTACCCTCTGAGACGGCGTGCCTGGCCAGTTCGCCGCGCAT 1485530
|||||||||||| ||||| || ||||| || ||||||||| |||| ||||| ||| |||
Sbjct 333603 GTACTTGGTGACAGCCTTAGTGCCCTCAGACACGGCGTGCTTGGCAAGTTCACCGGGCAG 333662
Query 1485531 GATCAGGCGCACGGCGGTCTGGATCTCGCGGGTGCCGATCGTGTTGCGCTTGTTAGTGCG 1485590
|||||| ||||||| |||||||| ||||| | ||| || |||||| || |
Sbjct 333663 GATCAGTCGCACGGATGTCTGGATTTCGCGCGATGAGATGGTCGACTTCTTGTT-GTATG 333721
Query 1485591 C-GCCAGGCGGCCGGCCTCGGTGCCGATGCGGTCGATCATGTCGTTGACAAACGAGTTCA 1485649
| || || | |||||||| ||| ||| |||| ||||||||||| || |||||||
Sbjct 333722 CAGCGAGCTTGGATGCCTCGGTTGCGACGCGCTCGAAGATGTCGTTGACGAAAGAGTTCA 333781
Query 1485650 TGATCGACATCGATTTGTTGGAGATGCCCACGTCGGGGTGCACCTGCTTGAGCAC 1485704
||| ||||| | ||||||||| || ||| ||||| ||||||||||| ||
Sbjct 333782 GGATGGACATGGCGCGGTTGGAGATACCGGTGTCTGGGTGAACCTGCTTGAGGAC 333836
>seq55
Length=2050790
Score = 143 bits (158), Expect = 4e-28
Identities = 321/480 (67%), Gaps = 4/480 (1%)
Strand=Plus/Minus
Query 2018914 TCCCGTGGATCGAAAAGTACCGCCCGACAGTGCTCGACGACATCGTGGGCAACGAGCACG 2018973
|||| || | |||||||||||||| | ||||||||||| || |||||| |
Sbjct 61455 TCCCTAGGGTTGAAAAGTACCGCCCCGTCTTCCTCGACGACATAGTCGGCAACACCGAAA 61396
Query 2018974 CCGTTGCCTACCTCAAGGCGCTGGCCGCCGACGGCAACATGCCCAACCTCTTGCTGGCGG 2019033
|| | | |||||| | ||| |||||||||||||| || | | | | |
Sbjct 61395 CCATCGAACGCCTCAAAATCATCGCCAAAGACGGCAACATGCCACACGTAATCATCTCCG 61336
Query 2019034 GCCCGCCCGGCACGGGCAAGACCACGAGCATCGCGTGCCTGGCGCGCGTGCTCTTGGGCG 2019093
|| |||||| | ||||| ||||| || ||||| |||||| ||||| ||||
Sbjct 61335 GCATGCCCGGAATCGGCAAAACCACCTCAGTCCTCTGCCTCGCGCGCCAACTCTTAGGCG 61276
Query 2019094 CGGCCGCCGACGAGGCCGTGCTCGAACTCAATGCGTCAGACGAGCGCGGCGTGGACGTCG 2019153
| ||| | | || ||||| ||||||||||| || || ||||||||||| | |||||||
Sbjct 61275 CAGCCTACAAAGAAGCCGTCCTCGAACTCAACGCCTCGGACGAGCGCGGAATCGACGTCG 61216
Query 2019154 TGCGTAGAATCATCAA--GCATCACGCTTCGAAAAGAATCGACCTGCCGCCCGGCCGCCA 2019211
| || | ||||| || || ||| ||||| || || || |||| || ||
Sbjct 61215 TACGAAACCGAATCAAGGGCTTCGCGC--AGAAAAAGGTCACACTCCCCGCCGGGCGGCA 61158
Query 2019212 CAAGGTGATCATCCTCGATGAGGCCGACTGCCTTACGTCGGCGGCCCAGCAGGCCCTCCG 2019271
||| | | || || ||||| || || || | || || | || |||||||| || ||
Sbjct 61157 GAAGATTGTAATTCTAGATGAAGCAGATAGCATGACTTCAGGAGCGCAGCAGGCACTGCG 61098
Query 2019272 ATCGACCATGGAAAAGTACACCAACACGACGCGGTTTGCGCTGGCCTGCAACACGTCGTC 2019331
|| ||||||| |||| || |||||| || || || | || || ||| |||
Sbjct 61097 CCGAACGATGGAAATCTACAGCAGCACGACCCGCTTCGCCTTCGCTTGTAACCAATCGAA 61038
Query 2019332 GATGGTCATCGAAGCCCTCCAGAGCCGTTGCGCCATCTTGCGCTTTGCGCGCCTCACCGA 2019391
| ||||||| | ||||| || ||||| ||||| |||| ||||| ||||||||
Sbjct 61037 CAAAATCATCGAGCCTCTCCAATCGCGCTGCGCAATCTTACGCTACGCGCGACTCACCGA 60978
Score = 127 bits (140), Expect = 3e-23
Identities = 178/250 (71%), Gaps = 0/250 (0%)
Strand=Plus/Plus
Query 793891 TGACGCCCGCCTTGGCATACTCGCCCACGCGCCGCTCGAAAAAGTTGGTCTTGCCCTCGA 793950
|||| || ||||| |||||||| || ||| |||||| |||||||||||||| | |
Sbjct 265109 TGACACCAGCCTTCTGGTACTCGCCAACACGCTTCTCGAAGAAGTTGGTCTTGCCGCCCA 265168
Query 793951 GCGAGATCAACTCCATCCACGGGAACGGGTTGGCCGTCAGGTAGTGCTTCTCGCACCCGA 794010
|||| || |||||| | ||| ||||||| | |||| ||||| | ||||
Sbjct 265169 GCGAAATGTTCTCCATGAAGTCGAAGGGGTTGGTGGCGTTGTAGAACTTCTTGTTGCCGA 265228
Query 794011 GCGACGCAAGCAGGCGGTCGGCGACGAATTCAATGTACTGGCACATGAGGGCGGCGTTCA 794070
| | | || ||||| |||||||||||||||||||| || |||||||| | |||||||
Sbjct 265229 GTGCCAACAGTAGGCGATCGGCGACGAATTCAATGTATTGTGACATGAGGTCAGCGTTCA 265288
Query 794071 TGCCGATGAGCGCCACGGGCAGCGACTCGCTGACAAACTCTTTCTCGATCTCGACGGCCT 794130
| || | ||| || || | || | | ||||| | ||||||| ||||||||
Sbjct 265289 TCCCCAGAAGCTTGCATGGAAGAGCGTCTGTCAAGAACTCCTGCTCGATCGTGACGGCCT 265348
Query 794131 CGATGATGAT 794140
|| |||||||
Sbjct 265349 CGGTGATGAT 265358
>seq22
Length=772489
Score = 118 bits (130), Expect = 2e-20
Identities = 104/130 (80%), Gaps = 0/130 (0%)
Strand=Plus/Plus
Query 2035632 TTTGAGTTGATCCTCGCCGCCAACTACCTCGACATCAAGCCCCTCCTCGATTTGGGGTGC 2035691
|| ||| | |||||||||||||||||| | || |||||| | || ||||| | || |||
Sbjct 533563 TTCGAGATCATCCTCGCCGCCAACTACATGGATATCAAGGCTCTTCTCGACGTCGGCTGC 533622
Query 2035692 AAGACCGTGGCCAACCTTATCAAGGGCAAGTCGCCCGAGGACATCCGCAAGACCTTTAAC 2035751
||||| || |||||| | ||||||||||||||||| || || ||||| ||||| || |||
Sbjct 533623 AAGACAGTCGCCAACATGATCAAGGGCAAGTCGCCAGAAGAGATCCGAAAGACGTTCAAC 533682
Query 2035752 ATCAAGTACG 2035761
|| || |||
Sbjct 533683 ATTCAGAACG 533692
>seq80
Length=246247
Score = 89.7 bits (98), Expect = 8e-12
Identities = 137/190 (72%), Gaps = 4/190 (2%)
Strand=Plus/Plus
Query 2069603 GGTTGACCACGGTAAAGTCGCCCGAGAGCACGCGGCGCGTGTAGATGTTGCTCGTG-ATG 2069661
||||||| || || ||||| | | ||| || || | ||| |||||||| ||| |||
Sbjct 191429 GGTTGACGACCTGGAACTCGCCAGCCAACACACGACGAGAGTAAATGTTGCTTGTGTATG 191488
Query 2069662 ACCTCGCACGCCTCGGTGTTGCCCAGGATCTGCGACGTCGTGGCCGTGGGCATGAGCGCC 2069721
| ||| | |||| | ||||| ||||||||| |||| ||| || ||||| ||||
Sbjct 191489 GC-TCGAAGCACTCGTTAAAGCCCATGATCTGCGAGGTCGAGGCTGTTGGCATCGGCGCA 191547
Query 2069722 ACGAGCAGCGAGTTGCGCAGGCCGTACT-GTCGCACCAGCGCCCGCAGGGCGTCCCAGTC 2069780
||||| ||||||||||||| |||| || | || | || || || ||| |||||||
Sbjct 191548 ACGAGAAGCGAGTTGCGCACACCGTGCTGGGCGATCTTGC-CCTTGAGTGCGGCCCAGTC 191606
Query 2069781 CCAGCGGCCG 2069790
|||| || ||
Sbjct 191607 CCAGAGGTCG 191616
>seq130
Length=857272
Score = 86.0 bits (94), Expect = 1e-10
Identities = 64/75 (85%), Gaps = 0/75 (0%)
Strand=Plus/Minus
Query 2175310 CGTCGAGGTCGGGGTCGCTGGCCAGGCCCTTCCACCCGACGGTCGTGCGCGGCTTTTCGA 2175369
|||||| ||| |||||| || |||||||||||| ||||| || ||||| ||||| ||||
Sbjct 684087 CGTCGATGTCTGGGTCGTTGATCAGGCCCTTCCAGCCGACTGTGGTGCGTGGCTTCTCGA 684028
Query 2175370 CATAGGCGCGCATGA 2175384
||||||||||||||
Sbjct 684027 GATAGGCGCGCATGA 684013
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 7916231401186899
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |