Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Dothistroma_20septosporum_20[genbank_20GCA_5F002236515.1_202017-07- 28] 141 sequences; 30,033,957 total letters Query= NC_026440.1 Length=2243109 Score E Sequences producing significant alignments: (Bits) Value seq55 174 2e-37 seq80 95.1 2e-13 >seq55 Length=2050790 Score = 174 bits (192), Expect = 2e-37 Identities = 357/515 (69%), Gaps = 28/515 (5%) Strand=Plus/Minus Query 1455775 GATATGGGAAATGTACCAAAAAGGCCGAGGCCTCCTTTTGGACCGCCGAGGAGGTCGACC 1455834 ||||||| |||||||| ||||||||||||||||| || ||||| || |||||| | || | Sbjct 265968 GATATGGCAAATGTAC-AAAAAGGCCGAGGCCTCATTCTGGACAGCTGAGGAGATTGATC 265910 Query 1455835 TCGGCGCCGACACGGTCCAC---TGGGTGTCGC---TGAGCGACGACGAGCGCCATTTCA 1455888 | | || | | ||||| ||| || | | ||||||||| || |||| Sbjct 265909 T-GTCGAAGGATC--TCCACGACTGGAACAAGCGACTCAACGACGACGAACGATTCTTCA 265853 Query 1455889 TCAAGCACGTCCTCGCCTTTTTTCGCCGCCAGCGATGGCATCGTGGCCGAGAACCTGGCC 1455948 || ||||||||||| || || |||||| ||||||||| || ||||||||| | | Sbjct 265852 TCTCACACGTCCTCGCATTCTT-CGCCGCATCCGATGGCATTGTCAACGAGAACCTCGTC 265794 Query 1455949 GGCCGCTTTATGAAAGAGGTCCAATTGCCAGAGGCACGTTTGTTTTACGGGTTCCAGATC 1456008 | ||||| | ||||| || | || |||||||| | || ||||| ||||||||| Sbjct 265793 GAGCGCTTCAGCTCTGAGGTGCAGATCCCGGAGGCACGATGCTTCTACGGCTTCCAGATC 265734 Query 1456009 GCCATCGAAAACATCCACTCTGAAACCTACTCGCTCCTGATCGACACCTACGTCAAGGAC 1456068 || || ||||||||||| || || || || || || ||||| || ||| ||| || Sbjct 265733 ATGATGGAGAACATCCACTCCGAGACATATTCCCTTCTCATCGATACATACATCAGCGAG 265674 Query 1456069 CCGGTCGAGAAG-GACC--ACCTCTTTCGCGCCATCGACACGGTGCCGTCGGTGAGGAAA 1456125 || || || || | |||| || |||||||||| | || | | | | Sbjct 265673 CC---AAAGCAGCGAACATACCTGTTCAATGCCATCGACAACATCCCATGCATCCGCAGG 265617 Query 1456126 AAGGCCGACTGGGCGATGAAGTGGAT---CAACAAGGAGGGCCTCGACACTTTGCCGAGC 1456182 ||||| ||||||||| || ||||| ||||| | ||||||| || ||| | Sbjct 265616 AAGGCTGACTGGGCGTTGCGATGGATTTCTGACAAGAA----CTCGACA-TTCGCCCTCC 265562 Query 1456183 GGCTCGTCGGCTTTGCCG-CGTCGAGGGCATCTTTTTCTCGGGCAGTTTCTGC-GCCATC 1456240 | ||| | | ||||||| ||| ||||| ||||| ||||| || | || ||| || ||| Sbjct 265561 GTCTCATTGCATTTGCCGCCGTTGAGGGTATCTTCTTCTCTGG-ATCTTTTGCTGCTATC 265503 Query 1456241 TTTTGGCTCAAGAAGCGCGGCCTCATGCCCGGTCT 1456275 || ||||| ||||| || || |||||| |||| || Sbjct 265502 TTCTGGCTGAAGAAACGTGGTCTCATGGCCGGGCT 265468 Score = 125 bits (138), Expect = 1e-22 Identities = 321/489 (66%), Gaps = 0/489 (0%) Strand=Plus/Plus Query 332847 CGATTTGGGCGTCAGTGAGGCGCACAAAGCGCAGGATGGCACAACGGCTCTGCAGGGCCT 332906 ||| ||| | || ||||| ||| | |||| | ||| || || || || || | || Sbjct 60967 CGACTTGCCCATCGGTGAGTCGCGCGTAGCGTAAGATTGCGCAGCGCGATTGGAGAGGCT 61026 Query 332907 CGATGACCATTGACGACGTGTTGCAGGCCAGGGCAAACCGCGTCGTATTGGTATGCTTTT 332966 |||||| | ||| ||| || || | ||| || || ||||| || | | ||| Sbjct 61027 CGATGATTTTGTTCGATTGGTTACAAGCGAAGGCGAAGCGGGTCGTGCTGCTGTAGATTT 61086 Query 332967 CCATGGTCGACCGGAGGGCCTGTTGGGCCGCCGGCGTGAGGCAGTCGGCCTCGTCGAGGA 333026 |||| || || || ||||| || || | | || | || || || || || || | Sbjct 61087 CCATCGTTCGGCGCAGTGCCTGCTGCGCTCCTGAAGTCATGCTATCTGCTTCATCTAGAA 61146 Query 333027 TGATGATCTTGTGGCGCCCGTGCGGCAGATCAACCCTTTTCGAGGCGTGGTGTTTGATGA 333086 | | ||||| || |||||| || || ||| ||||| ||| | ||||| Sbjct 61147 TTACAATCTTCTGCCGCCCGGCGGGGAGTGTGACCTTTTTCTGCGCGAAGCCCTTGATTC 61206 Query 333087 TCTTGCGCACGACGTCCACGCCGCGCTCGTCCGACGCGTTGAGTTCGAGCACGGCCTCGT 333146 || || |||||||| | |||||||||||||| |||||||||||||| ||||| || | Sbjct 61207 GGTTTCGTACGACGTCGATTCCGCGCTCGTCCGAGGCGTTGAGTTCGAGGACGGCTTCTT 61266 Query 333147 CGGCGGCCGCACCCAAGAGGACGCGCGCCAGGCACGCGATGCTCGTGGTCTTGCCCGTGC 333206 | ||| || || ||||| |||||| ||||| || ||||| ||||| | | Sbjct 61267 TGTAGGCTGCGCCTAAGAGTTGGCGCGCGAGGCAGAGGACTGAGGTGGTTTTGCCGATTC 61326 Query 333207 CGGGCGGACCCGCCAGCAAGAGGTTGGGCATGTTGCCGTCGGCGGCCAGCGCCTTGAGGT 333266 ||||| || | | | | || |||||||||||||| ||| | |||||| Sbjct 61327 CGGGCATGCCGGAGATGATTACGTGTGGCATGTTGCCGTCTTTGGCGATGATTTTGAGGC 61386 Query 333267 AGGCAACGGCGTGCTCGTTGCCGACAATGTCGTCGAGCACCATTGGGCGGTACTTTTCGA 333326 | | || | ||||||||| ||||||||||| | | |||||||||||||| | Sbjct 61387 GTTCGATGGTTTCGGTGTTGCCGACTATGTCGTCGAGGAAGACGGGGCGGTACTTTTCAA 61446 Query 333327 TCCATGGGA 333335 || |||| Sbjct 61447 CCCTAGGGA 61455 Score = 100 bits (110), Expect = 4e-15 Identities = 177/253 (70%), Gaps = 4/253 (2%) Strand=Plus/Minus Query 1456523 ATCATCGTCGAGGCCGTCGAGATCGAGAAAGAGTTTGTCAGCGAGTCGCTGCCGGTGGCG 1456582 |||||| |||||||||| ||||||| | ||||| | | || | || || | Sbjct 265358 ATCATCACCGAGGCCGTCACGATCGAGCAGGAGTTCTTGACAGACGCTCTTCCATGCAAG 265299 Query 1456583 CTCATCGGCATGAACGCCACCGCTCATGTGCCAGTACATTGAATTTTGTCGCCGACCGCC 1456642 || | || |||||||| | ||||||| || ||||||||||| |||||||| |||| Sbjct 265298 CTTCTGGGGATGAACGCTGAC-CTCATGTCACAATACATTGAATTC-GTCGCCGATCGCC 265241 Query 1456643 TGCTCGCGGCGCTCGGCTGCGGAGAAGCACTACCGGACGGCCAACCCGTTCCCATGGATG 1456702 | || ||| |||||| | ||||| |||| | ||||||| ||| | ||| Sbjct 265240 TACTGTTGGCACTCGGCAACA-AGAAGTTCTACAACGCCACCAACCCCTTCGACTTCATG 265182 Query 1456703 GAGTTGATCTCGCTCGAGGGCAAGACCAACTTTTTCGAGCGCCGCG-TGGCGAGTACGCC 1456761 ||| || ||||| | |||||||||||||| |||||| || | |||||||||| Sbjct 265181 GAGAACATTTCGCTGGGCGGCAAGACCAACTTCTTCGAGAAGCGTGTTGGCGAGTACCAG 265122 Query 1456762 AAGGCCGGCGTCA 1456774 ||||| || |||| Sbjct 265121 AAGGCTGGTGTCA 265109 >seq80 Length=246247 Score = 95.1 bits (104), Expect = 2e-13 Identities = 138/190 (73%), Gaps = 4/190 (2%) Strand=Plus/Minus Query 262872 CGGCCGCTGGGACTGGGACGCACTGCGGGCGTCGGTTCGAC-AGCATGGCCTGCGCAACT 262930 || || ||||||||||| |||||| || | | ||| | |||| || ||||||||| Sbjct 191616 CGACCTCTGGGACTGGGCCGCACTCAAGG-GCAAGATCGCCCAGCACGGTGTGCGCAACT 191558 Query 262931 CGTTGCTCGTGGCGCTCATGCCCACGGCCACGACGTCGCAGATCCTGGGCAACACCGAGG 262990 || | ||||| |||| ||||| || ||| |||| ||||||||| ||||| | |||| Sbjct 191557 CGCTTCTCGTTGCGCCGATGCCAACAGCCTCGACCTCGCAGATCATGGGCTTTAACGAGT 191498 Query 262991 CGTTCGAGGTCAT-CACGAGCAACATCTACACGCGCCGCGTGCTCTCGGGCGACTTTACC 263049 ||||| | ||| ||| |||||||| ||| | || || ||| | | ||||| || Sbjct 191497 GCTTCGA-GCCATACACAAGCAACATTTACTCTCGTCGTGTGTTGGCTGGCGAGTTCCAG 191439 Query 263050 GTGGTCAACC 263059 || ||||||| Sbjct 191438 GTCGTCAACC 191429 Score = 89.7 bits (98), Expect = 7e-12 Identities = 101/133 (76%), Gaps = 2/133 (2%) Strand=Plus/Minus Query 262094 ATCTGGTCGGCCATTGTCGCGGCCCATATCGAGACCGGCACGCCCTACATGGTCTACAAG 262153 || |||| || ||| ||| ||| || | |||||||||||| || | ||| | |||||| Sbjct 192182 ATATGGTATGCTATTCTCGAGGCGCAGACCGAGACCGGCACACCTTTCATTCTGTACAAG 192123 Query 262154 GACGCCGTCAACCTGACCAGCAACCAGCAGAACCTGGGCACCACGACAGAG-GCCAACCT 262212 ||||||| ||||| | ||||||||| |||| || ||||||| | |||| | || | Sbjct 192122 GACGCCGCCAACCGCAAGAGCAACCAGAAGAATCTTGGCACCATCA-AGAGCTCTAATTT 192064 Query 262213 GTGCACCGAGATC 262225 |||||| |||||| Sbjct 192063 GTGCACTGAGATC 192051 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 7177797600290842