Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Dothistroma_20septosporum_20[genbank_20GCA_5F002236515.1_202017-07- 28] 141 sequences; 30,033,957 total letters Query= NC_027213.1 Length=214699 Score E Sequences producing significant alignments: (Bits) Value seq55 167 3e-36 seq80 143 4e-29 >seq55 Length=2050790 Score = 167 bits (184), Expect = 3e-36 Identities = 551/850 (65%), Gaps = 10/850 (1%) Strand=Plus/Plus Query 39326 TTTTGGTATTCACCAACGCGTTTCTCGAAAAAATTAGTTTTGCCTTCCAATGATATATTT 39385 || ||||| || ||||| || |||||||| || || || ||||| ||| || || || Sbjct 265120 TTCTGGTACTCGCCAACACGCTTCTCGAAGAAGTTGGTCTTGCCGCCCAGCGAAATGTTC 265179 Query 39386 TCCATGAAATCAAACGGATTAGTTGCATTATAtttttttttAAATCCTAATTCTGAAATC 39445 |||||||| || || || || || || || || || || || | | | | | Sbjct 265180 TCCATGAAGTCGAAGGGGTTGGTGGCGTTGTAGAACTTCTTGTTGCCGAGTGCCAACAGT 265239 Query 39446 AATCTATCTGCAACAAATTCTATGTATGTTTTCATCATTTCACAATTCATTCCTATGAGT 39505 | | ||| || || ||||| |||||| | ||| | ||| ||||| || | || Sbjct 265240 AGGCGATCGGCGACGAATTCAATGTATTGTGACATGAGGTCAGCGTTCATCCCCAGAAGC 265299 Query 39506 TTAACTGGTAGAGCCTCCGTTAGAAACTCTTTTTCGATGTCTACGGCCTCTGTTATTATC 39565 || ||| ||||| || || | ||||| | ||||| |||||||| || || || Sbjct 265300 TTGCATGGAAGAGCGTCTGTCAAGAACTCCTGCTCGATCGTGACGGCCTCGGTGATGAT- 265358 Query 39566 GATGTT-ACTACCTCATCACTCGGTGGATGCAATAAATGTTTAAACATTAAGCAGGCGAA 39624 | | | || | | | |||| | | | ||| |||| | ||||||||| Sbjct 265359 GCTCTGCACAAGGGCCTGGTTCGGCTTGTTCTTCAGATGCGAGAACAGAAGGCAGGCGAA 265418 Query 39625 GTCACAATGTAGGCCCTCATCTCTACTAATTAATTCGTTAGAAAATGTGAGTCCAGGCAT 39684 ||| || | ||||||||| | || | ||||| || |||||||| || | ||| Sbjct 265419 GTCTGTGTGCATGCCCTCATCACGGGAGATGAGCTCGTTCGAGAATGTGAGCCCGGCCAT 265478 Query 39685 TAGACCACGCTTTTTGAGCCAAAATATGGCAGCAAAAGATCCAGAAAAGAAGATGCCTTC 39744 |||||||| || || ||||| || || ||||||||||||||||| |||||||| || || Sbjct 265479 GAGACCACGTTTCTTCAGCCAGAAGATAGCAGCAAAAGATCCAGAGAAGAAGATACCCTC 265538 Query 39745 TACTGCTGCAAATGCAACAAGTCTCTCTCCGTAACTTG---TATCATTATGTATCCACTT 39801 || || |||||||||| || | || | | | | | | | ||||| Sbjct 265539 AACGGCGGCAAATGCAATGAGACGGAGGGCGAATGTCGAGTTCTTGTCAGAAATCCATCG 265598 Query 39802 CTGTGCCCAATCAGCTTTCTTCTTTACACAAGGCATTGTTTCTATAGCATTAAAGAGATA 39861 | ||||| ||||| ||| | | || || || | || || ||||| || || | Sbjct 265599 CAACGCCCAGTCAGCCTTCCTGCGGATGCATGGGATGTTGTCGATGGCATTGAACAGGT- 265657 Query 39862 ATGTT-TTTCATCACTATCTTTAACATATGTATCTATTAACAGACTATACATTTCTGAAT 39920 ||||| | | || | | |||||||| || | || ||| | || || | Sbjct 265658 ATGTTCGCTGCTTTGGCTCGCTGATGTATGTATCGATGAGAAGGGAATATGTCTCGGAGT 265717 Query 39921 GGATGTTTTCAATCGCCATCTGAAATCCGTAAAAACATCTTGCTTCAGTAATTTGTACCT 39980 ||||||| || ||| ||||| || ||||| || |||| ||| || | || || |||| Sbjct 265718 GGATGTTCTCCATCATGATCTGGAAGCCGTAGAAGCATCGTGCCTCCGGGATCTGCACCT 265777 Query 39981 CTGAACAAAATCTTTCCGCCAAATTTTCATTCACTATTCCATCACTAGCGGCAAAAAATG 40040 | || | || | || | | || || || || || ||||| ||||| || |||| Sbjct 265778 CAGAGCTGAAGCGCTCGACGAGGTTCTCGTTGACAATGCCATCGGATGCGGCGAAGAATG 265837 Query 40041 CCAATACATGTTTAATAAAATATTTTTCATCGGGTGTCAAT---TTATTCCAGTCATTGA 40097 | | || ||| || || || ||| ||| | | | || |||||||| | || Sbjct 265838 CGAGGACGTGTGAGATGAAGAATCGTTCGTCGTCGTTGAGTCGCTTGTTCCAGTCGTGGA 265897 Query 40098 TATCTTTTGATATATCTACTTCTTCAGCTGTCCAAAACGACGCCTCTGCCTTTTTGTACA 40157 ||| || || | ||| | || ||||||||||| || || ||||| ||||||||||||| Sbjct 265898 GATCCTTCGACAGATCAATCTCCTCAGCTGTCCAGAATGAGGCCTCGGCCTTTTTGTACA 265957 Query 40158 TGTTCCATAT 40167 | | |||||| Sbjct 265958 TTTGCCATAT 265967 >seq80 Length=246247 Score = 143 bits (158), Expect = 4e-29 Identities = 550/858 (64%), Gaps = 22/858 (3%) Strand=Plus/Plus Query 69277 GATGCTAGATTACAAACTGCTACCTCATTAGAATTTGCATATTGTATTATCTCTGTACAT 69336 || || ||||| || || || ||||||| | | | || | || ||||| || || Sbjct 192004 GAAGCCAGATTGCAGACAGCGACCTCATCTGGAGCAGAGTACTCCATGATCTCAGTGCAC 192063 Query 69337 AGATTACTACATTTGATAGTCCCCAGATTTTGCTGATTACTCTTTTTGTTACAGGCGTCC 69396 | |||| | ||||| || || ||||| | ||| || ||||| ||| ||||||| Sbjct 192064 AAATTAGAGCTCTTGATGGTGCCAAGATTCTTCTGGTTGCTCTTGCGGTTGGCGGCGTCC 192123 Query 69397 TTGTAAAGAATAAACGGAGTACCAGTTTCAATCTGAGATTCGATAATAGATTTCCAAACG 69456 ||||| ||||| || || || || || || |||| | |||| ||||| | ||| | Sbjct 192124 TTGTACAGAATGAAAGGTGTGCCGGTCTCGGTCTGCGCCTCGAGAATAGCATACCATATT 192183 Query 69457 ACCCTAGCATTTA-----TTACGGTC-TTGTAACGCTTCTCTTTTTCATATTGTGTATAT 69510 | |||| | | |||| | ||| ||||||| | |||| | || Sbjct 192184 TTCTGAGCACGAACCGTCTCACGGCCCTTGC----CTTCTCTCT--CATAACGCTCGTAC 192237 Query 69511 AGCCGTTCGAATTCATCTCCCCAAACATCATCCAATCCAGGACATTCATTTGGACACATC 69570 ||| | ||| || || || ||||||| || ||||| ||||| || || |||||| Sbjct 192238 AGCTCCTTGAACTCGTCACCGTAAACATCCGACAGACCAGGGCATTCGTTGGGGCACATC 192297 Query 69571 AATGACCACACATCATCATCCTTAACTCGTTTCATAAATAGATCGGGAATCCAAAGAGCT 69630 | | ||| | | | | || || | |||||| |||||||||||||| ||||| Sbjct 192298 AGAGTCCAAGTGCCGTTCTGTTCGACACGCTGCATAAAGAGATCGGGAATCCAGAGAGCG 192357 Query 69631 ATAAAGAGATCTCTGGTTCTATTTTCTTCATTTCCTGTAttttttttAAGATCGAGAAAC 69690 || | ||| | | | | |||||| ||||| || || ||| || | ||| Sbjct 192358 TAGAACAAATCGCGCGCACGAACTTCTTCCTTTCCATGGTTCTTGCGAAGGTCCATGAAC 192417 Query 69691 TCCATAATATCAGAATGCCATGGTTCTAGATATATCGCCATGACTCCCGGTCGTTTATTT 69750 | ||| | || | |||||| || || || || || || | | || || || || || Sbjct 192418 TGCATGACGTCTGCATGCCACGGCTCAAGGTAGATGGCAAAAGCACCTGGACGCTTGTTG 192477 Query 69751 CCTCCCTGATCTATGTATCTGGCAGTGTTATTATAGACTCTCAGCATCGGAATAATACCA 69810 || ||||| || | ||| | |||||||| |||||||||| ||||| || | || ||| Sbjct 192478 CCACCCTGGTCAACGTAACGAGCAGTGTTGTTATAGACTCGTAGCATTGGTACAAGACCG 192537 Query 69811 TTAGATTTACCATTTGTTCCAGAAATATAACTTCCTCTTGCGCGAATATTACTAATAGAT 69870 || ||| | || ||||| || ||| || ||| | || | || || || | Sbjct 192538 TTGGATGTGCCGTTTGTGCCGCCAATGTATGAGCCTGTGGCCCTGATGTTGTGAACATGA 192597 Query 69871 AGACCTATTCCTCCTGCCATTTTAGAGATTAGAGCACAACGTTTCAATGTGTCATATATA 69930 ||||| || || || || | || ||||| | ||||| || | || || || ||| Sbjct 192598 AGACCAATACCGCCAGCGTTCTTGGAGATCATGGCACATATCTTGAGGGTATCGTAGATA 192657 Query 69931 CCCTCTATGCTATCATCTATCATG----TTAAGAAGAAAACAGCTAGACATTTGATGATG 69986 || || ||||| ||||| ||||| |||||| | ||||| || || Sbjct 192658 CCATCAATGCTGTCATCCTTCATGGCCACCAAGAAGCAGGATGCTAG----CTGCGCCTG 192713 Query 69987 TATAGTTCCCGCATTAAATAATGTAGGAGATGCGTGAGTGAACCATTTTTCAGA-AAGCA 70045 | || || ||| | || | ||| || || || || ||||| | || || | | | Sbjct 192714 TGGGGTACCAGCACTGAAAAGTGTTGGCGAAGCATGTGTGAAGTACTTCAACGACATGTA 192773 Query 70046 GATTGTATGTTTCAATAGCTGATTCTATATCCCACTGATGAATTCCTATCGCGACACGCA 70105 | |||||||| ||||| |||| ||| || || | |||||| || | || ||||||| Sbjct 192774 G-TTGTATGTCTCAATCGCTGCTTCAATGTCTTCCCCATGAATGCCGACAGCCACACGCA 192832 Query 70106 TCAACATATGCTGAGGTC 70123 | | ||| || || |||| Sbjct 192833 TGATCATCTGTTGCGGTC 192850 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 686907589323240