Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Dothistroma_20septosporum_20[genbank_20GCA_5F002236515.1_202017-07- 28] 141 sequences; 30,033,957 total letters Query= NC_028110.1 Length=171045 Score E Sequences producing significant alignments: (Bits) Value seq80 217 2e-51 seq64 118 1e-21 >seq80 Length=246247 Score = 217 bits (240), Expect = 2e-51 Identities = 475/698 (68%), Gaps = 24/698 (3%) Strand=Plus/Minus Query 53267 AAGTACTTTACGCACGCCACGCCAACCCTGTTCAACGCTGGTACGAATCACCCTCAGATG 53326 |||||||| || || || ||||||| || |||| |||||||| || | ||| | Sbjct 192761 AAGTACTTCACACATGCTTCGCCAACACTTTTCAGTGCTGGTACCCCACAGGCGCAGCTA 192702 Query 53327 TCGAGCTGCTTCCTGGTGGCGATGAAGGATGACTCGATCGACGGCATCTACGAGACGCTC 53386 | ||||||| ||||||| |||||||||||| || || || |||||||| || ||| Sbjct 192701 GCATCCTGCTTCTTGGTGGCCATGAAGGATGACAGCATTGATGGTATCTACGATACCCTC 192642 Query 53387 AAGGAGTGTGCCCACATCTCCAAGTGGTCGGGTGGTATCGGTATCCACTGCTCG-AACGT 53445 ||| |||||| ||||||||| | || ||||| ||| | || || || ||| | Sbjct 192641 AAGATATGTGCCATGATCTCCAAGAACGCTGGCGGTATTGGTCTTCA-TGTTCACAACAT 192583 Query 53446 CCGTGCGAACGGCACACCAATCAAGGGGACGAACGGCGTCGCCGATGGAATCGTGCCTAT 53505 | | || | ||| || || || || |||||| || | || | || || || Sbjct 192582 CAGGGCCACAGGCTCATACATTGGCGGCACAAACGGCACATCCAACGGTCTTGTACCAAT 192523 Query 53506 GCTCCGCGTCTTCAACAACACGGCCCGGTACGTCAACCAGGGTGGTGGGAAGCG-CAAGG 53564 ||| || |||| |||||||| || || ||||| |||||||||| ||||| | ||| Sbjct 192522 GCTACGAGTCTATAACAACACTGCTCGTTACGTTGACCAGGGTGGCAACAAGCGTCCAGG 192463 Query 53565 GGTCGTTCGCCATCTACCTCGAGCCGTGGCACGCCGACATTATGGAGTTTCTCGAGCTGC 53624 | | || ||||||||||| ||||||||||| || ||| | ||| |||| | || || | Sbjct 192462 TG-CTTTTGCCATCTACCTTGAGCCGTGGCATGCAGACGTCATGCAGTTCATGGACCTTC 192404 Query 53625 GTCTGAATCAGGGTGACGAAGAGATGCGCTGC-CGTGACCTGTT-TACAGCTCTGTGGAT 53682 | ||| || || | ||||| | || ||| || || |||| ||| ||||| ||||| Sbjct 192403 GCAAGAACCATGGAAAGGAAGAAGTTCG-TGCGCGCGATTTGTTCTAC-GCTCTCTGGAT 192346 Query 53683 TCCGGACCTCTTCATGCAAAAGGTGGAGAAGGACGAGGAGTGGTAC-CTGATGTGCCCGA 53741 ||| || ||||| ||||| || || || ||| | | | | || ||||||||||| | Sbjct 192345 TCCCGATCTCTTTATGCAGCGTGTCGAACAGAACG-GCACTTGGACTCTGATGTGCCCCA 192287 Query 53742 ACGAGTGCCCCGGCCTCCAGGGTGTCTACGGTGAGGAGTTTAACGAGATGTATCGGACGT 53801 |||| ||||| || || || ||| |||||||| ||||| || ||| |||| || ||| Sbjct 192286 ACGAATGCCCTGGTCTGTCGGATGTTTACGGTGACGAGTTCAAGGAGCTGTA-CGAGCGT 192228 Query 53802 -------ACGCAGTTCAGGGCCGCTACAAGAAGAAGGTCAAGGCGCGTGAGGTATGGGAT 53854 | || ||||||| ||| ||| || | | ||||| || Sbjct 192227 TATGAGAGAGAAGGCAAGGGCCG------TGAGACGGTTCGTGCTCAGAAAATATGGTAT 192174 Query 53855 GCAATCCTCAAGAGCCAGGTGGAGACGGGAACGCCGTACATGTGCTACAAGGATTCGGTC 53914 || || ||| || ||| ||||| || || || | ||| |||||||| | | | Sbjct 192173 GCTATTCTCGAGGCGCAGACCGAGACCGGCACACCTTTCATTCTGTACAAGGACGCCGCC 192114 Query 53915 AACGAGAAGAGCAACCAGAAGAACATCGGCGTCATCAA 53952 ||| ||||||||||||||||| | ||| |||||| Sbjct 192113 AACCGCAAGAGCAACCAGAAGAATCTTGGCACCATCAA 192076 Score = 87.8 bits (96), Expect = 2e-12 Identities = 77/96 (80%), Gaps = 0/96 (0%) Strand=Plus/Minus Query 55484 CGCAACTCCCTGCTCGTGGCGCCAATGCCAACCGCGTCGACGGCTCAGATCATGGGCAAC 55543 |||||||| || ||||| ||||| |||||||| || ||||| | |||||||||||| Sbjct 191564 CGCAACTCGCTTCTCGTTGCGCCGATGCCAACAGCCTCGACCTCGCAGATCATGGGCTTT 191505 Query 55544 AACGAGGCGTTCGAGCCGTACACGACCAACATCTAC 55579 |||||| |||||||| ||||| | |||||| ||| Sbjct 191504 AACGAGTGCTTCGAGCCATACACAAGCAACATTTAC 191469 >seq64 Length=404236 Score = 118 bits (130), Expect = 1e-21 Identities = 185/265 (70%), Gaps = 0/265 (0%) Strand=Plus/Minus Query 117152 CCAGTTCCGATACCCTCTGCACCATTCATCAGAATCATCGGCACGACAGGAACGTAGAAC 117211 || |||||||| || || ||||| || ||||| |||||||||| || ||||| || | | Sbjct 324971 CCGGTTCCGATGCCATCAGCACCGTTGATCAGGATCATCGGCAAGATTGGAACATACATC 324912 Query 117212 TCAGGCTCCACCTGCAGACCGTCGTCCGTGACGTACTTGAGCACCGCATTGTCACTCGGA 117271 || || || | | |||||||| ||| |||| | |||| ||| | || ||| | Sbjct 324911 TCCGGTTCGATGGTCTTGCCGTCGTCGGTGTTGTACGTCAGCAGCGCTTCATCGCTCTGG 324852 Query 117272 TCGAATATGTTCTTGGTCCACGGTGCTAGGCGAGTGAAAATGTAACGAGAGCTTGCAGCA 117331 | || || | | | || | || | ||| | |||||||||| || || ||| Sbjct 324851 TGAAAGATCGCCCTCGCAAGTGGAGACAGTCTCGTGTATATGTAACGAGGACTGGCCGCA 324792 Query 117332 TCCTTGCCACCAGCAAGACGCGTACCGAATTGTCCACTCGGCTCCAAGAGGTTCAGGTTG 117391 || |||||||| ||||| | || || | ||||||||||| | || ||||| |||| Sbjct 324791 TCGTTGCCACCTTGCAGACGTGATCCAAAATTGCCACTCGGCTCGAGGATGTTCATGTTG 324732 Query 117392 TTGGCGCCCACAAAGTTTTGAGCCA 117416 |||| ||||| ||||| ||||||| Sbjct 324731 TTGGAACCCACGAAGTTCTGAGCCA 324707 Score = 107 bits (118), Expect = 2e-18 Identities = 281/424 (66%), Gaps = 10/424 (2%) Strand=Plus/Minus Query 151876 CCGGTACCGATGCCCTCTGCACCGTTGACCAGAATCATCGGCACAATAGGGGCGTAAAAC 151935 ||||| |||||||| || |||||||||| ||| |||||||||| || || | || | | Sbjct 324971 CCGGTTCCGATGCCATCAGCACCGTTGATCAGGATCATCGGCAAGATTGGAACATACATC 324912 Query 151936 TCCGGCTCCACC-TGTTGACCGTCATCCATCACGTATTTCAAAACGGAATTGTCAGCCGG 151994 ||||| || | | ||| ||||| || | ||| ||| | | | || | | Sbjct 324911 TCCGGTTCGATGGTCTTG-CCGTCGTCGGTGTTGTACGTCAGCAGCGCTTCATCGCTCTG 324853 Query 151995 ATCGAATATC--CGTCG--AGTCATAGGACTCAAACGCGTGAAGATGTATCGGGAGCTGG 152050 | || ||| | ||| ||| ||| || | |||| | ||||| || | |||| Sbjct 324852 GTGAAAGATCGCCCTCGCAAGT----GGAGACAGTCTCGTGTATATGTAACGAGGACTGG 324797 Query 152051 CCGCATCCTTGCCACCTGCCAGCCGCGTTCCAAACTGTCCAGAGGGCTCGAGGAGGTTGA 152110 ||||||| ||||||||| ||| || | |||||| | ||| |||||||||| ||| | Sbjct 324796 CCGCATCGTTGCCACCTTGCAGACGTGATCCAAAATTGCCACTCGGCTCGAGGATGTTCA 324737 Query 152111 GGTTGTTGGCGCCCACGAAATTCTGAGCCAAATTCACAATCGTGCCCTGCAGACTCGCTT 152170 |||||||| |||||||| |||||||||| | | || || |||||| | | Sbjct 324736 TGTTGTTGGAACCCACGAAGTTCTGAGCCAGACCGATGATGGTTTGCTGCAGTGATGTCT 324677 Query 152171 CACCGTGGTGATACGCCGTCTGCTCCGCGATGTATCCCGCCAACTGCGCCACCTTCATGT 152230 |||||| | || || || | | | || | || |||| || | ||||||| | | Sbjct 324676 CACCGTACGGGTATGCGGTGAGGCCGGAGACTGAACCAGCCAGCTCCACCACCTTGACAT 324617 Query 152231 CCGTCGTCAGGTTCTTCTTGAGACAGGCGTAAATCACCTTGCGCTGGGATGGTTTCAAAC 152290 | || ||||||| || ||| | ||| || || || ||||| || ||||| | Sbjct 324616 CTTTCTTCAGGTTGCGGCGGAAACATGTGTACATGACTTTTCGCTGACCCGGCTTCAAGC 324557 Query 152291 CGTC 152294 |||| Sbjct 324556 CGTC 324553 Score = 95.1 bits (104), Expect = 1e-14 Identities = 242/360 (67%), Gaps = 14/360 (4%) Strand=Plus/Minus Query 152757 CACGTGGAACATGTTGAGGACCAAGCCCTTGATGTGCGATCCGTCAAGATCCGCGTCGGT 152816 ||| || || | ||||| || || ||||||||||| || || || ||||| ||||| Sbjct 324087 CACTTGCAAGAAGTTGATGAGCAGACCCTTGATGTGAGAGCCATCGTGATCCTGATCGGT 324028 Query 152817 CATGATCATCAGACGACCGTAGCGCAGGTCACGTAGTGAC-CCGTAGACCTTTCCATGTT 152875 ||||||||||||| | || || |||| | | |||| | |||| |||| ||||| Sbjct 324027 CATGATCATCAGATGGCCATAACGCAAG-CCTTTAGTATCTGTGTAGTCCTTCTTATGTT 323969 Query 152876 GAAGCCCGAGGATCTTTTTGAGGTTGGAAAATTCCTCATTATCGGTCACCTGTTTCACCG 152935 | || || | | ||| |||| ||| || || | || | | | ||| | | | Sbjct 323968 GCAGACCCAAAAACTTCTTGATGTTCTGAATCTCGGCGTTCTTTGAAATCTGGTCGATGG 323909 Query 152936 TGGCATCCCGAACATTGCGCGGCTTTCCCCGGAGTGGAAACACGCCGAACGCGTTGCGGC 152995 ||||| || |||||| | ||| ||||| ||||| || || || ||| || || Sbjct 323908 AAGCATCGCGCACATTGAGAATCTTACCCCGAAGTGGGAAGACACCAAACAGGTCTGGGT 323849 Query 152996 CTACAAC-GCTCAGACCGGCAATAGCAAG---GGCTTTCGCCGAGTCACCCTCGGTGATA 153051 ||||| |||| | || |||| |||||| ||| || |||||||| || || | Sbjct 323848 TGACAACAGCTC-GCCCTGCAAGAGCAAGCAAGGC---GGCAGAGTCACCTTCTGTCAAG 323793 Query 153052 ATAAGCGTACAGTCGTGAGACCG--ATGAGTACCGGCCCAGTTGGCGTCGTCAAGCTTGG 153109 || || || || | || ||||| | ||||||||| ||||||||| |||||||| Sbjct 323792 ATGAGTGTGCA--CTTGTGACCGTCCTTCGTACCGGCCTTGTTGGCGTCTGTAAGCTTGG 323735 Score = 87.8 bits (96), Expect = 2e-12 Identities = 90/115 (78%), Gaps = 2/115 (2%) Strand=Plus/Minus Query 119074 ACTGAACACGTTGGCTAGCTTGGCACCGTATCCGTTCCGACCACCGGTCACGCGCTG-CT 119132 |||| | | ||||| ||||||||||||||||||||||| ||||| ||| | || || Sbjct 322926 ACTGTAGATGTTGGTAAGCTTGGCACCGTATCCGTTCCGGCCACCAGTC-GTCTTTGCCT 322868 Query 119133 CCTCGTCGTTGTAGTTGGAGCTGGTCAAAAGGTGCCCAAAGATGAGCTCGGGGAT 119187 ||||||||| ||||||||| || | |||||| || ||||| | |||||| || Sbjct 322867 CCTCGTCGTCGTAGTTGGACGAAGTAAGAAGGTGACCGAAGATCATCTCGGGAAT 322813 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 547215035531800