Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Dothistroma_20septosporum_20[genbank_20GCA_5F002236515.1_202017-07-
28] 141 sequences; 30,033,957 total letters
Query= NC_028110.1
Length=171045
Score E
Sequences producing significant alignments: (Bits) Value
seq80 217 2e-51
seq64 118 1e-21
>seq80
Length=246247
Score = 217 bits (240), Expect = 2e-51
Identities = 475/698 (68%), Gaps = 24/698 (3%)
Strand=Plus/Minus
Query 53267 AAGTACTTTACGCACGCCACGCCAACCCTGTTCAACGCTGGTACGAATCACCCTCAGATG 53326
|||||||| || || || ||||||| || |||| |||||||| || | ||| |
Sbjct 192761 AAGTACTTCACACATGCTTCGCCAACACTTTTCAGTGCTGGTACCCCACAGGCGCAGCTA 192702
Query 53327 TCGAGCTGCTTCCTGGTGGCGATGAAGGATGACTCGATCGACGGCATCTACGAGACGCTC 53386
| ||||||| ||||||| |||||||||||| || || || |||||||| || |||
Sbjct 192701 GCATCCTGCTTCTTGGTGGCCATGAAGGATGACAGCATTGATGGTATCTACGATACCCTC 192642
Query 53387 AAGGAGTGTGCCCACATCTCCAAGTGGTCGGGTGGTATCGGTATCCACTGCTCG-AACGT 53445
||| |||||| ||||||||| | || ||||| ||| | || || || ||| |
Sbjct 192641 AAGATATGTGCCATGATCTCCAAGAACGCTGGCGGTATTGGTCTTCA-TGTTCACAACAT 192583
Query 53446 CCGTGCGAACGGCACACCAATCAAGGGGACGAACGGCGTCGCCGATGGAATCGTGCCTAT 53505
| | || | ||| || || || || |||||| || | || | || || ||
Sbjct 192582 CAGGGCCACAGGCTCATACATTGGCGGCACAAACGGCACATCCAACGGTCTTGTACCAAT 192523
Query 53506 GCTCCGCGTCTTCAACAACACGGCCCGGTACGTCAACCAGGGTGGTGGGAAGCG-CAAGG 53564
||| || |||| |||||||| || || ||||| |||||||||| ||||| | |||
Sbjct 192522 GCTACGAGTCTATAACAACACTGCTCGTTACGTTGACCAGGGTGGCAACAAGCGTCCAGG 192463
Query 53565 GGTCGTTCGCCATCTACCTCGAGCCGTGGCACGCCGACATTATGGAGTTTCTCGAGCTGC 53624
| | || ||||||||||| ||||||||||| || ||| | ||| |||| | || || |
Sbjct 192462 TG-CTTTTGCCATCTACCTTGAGCCGTGGCATGCAGACGTCATGCAGTTCATGGACCTTC 192404
Query 53625 GTCTGAATCAGGGTGACGAAGAGATGCGCTGC-CGTGACCTGTT-TACAGCTCTGTGGAT 53682
| ||| || || | ||||| | || ||| || || |||| ||| ||||| |||||
Sbjct 192403 GCAAGAACCATGGAAAGGAAGAAGTTCG-TGCGCGCGATTTGTTCTAC-GCTCTCTGGAT 192346
Query 53683 TCCGGACCTCTTCATGCAAAAGGTGGAGAAGGACGAGGAGTGGTAC-CTGATGTGCCCGA 53741
||| || ||||| ||||| || || || ||| | | | | || ||||||||||| |
Sbjct 192345 TCCCGATCTCTTTATGCAGCGTGTCGAACAGAACG-GCACTTGGACTCTGATGTGCCCCA 192287
Query 53742 ACGAGTGCCCCGGCCTCCAGGGTGTCTACGGTGAGGAGTTTAACGAGATGTATCGGACGT 53801
|||| ||||| || || || ||| |||||||| ||||| || ||| |||| || |||
Sbjct 192286 ACGAATGCCCTGGTCTGTCGGATGTTTACGGTGACGAGTTCAAGGAGCTGTA-CGAGCGT 192228
Query 53802 -------ACGCAGTTCAGGGCCGCTACAAGAAGAAGGTCAAGGCGCGTGAGGTATGGGAT 53854
| || ||||||| ||| ||| || | | ||||| ||
Sbjct 192227 TATGAGAGAGAAGGCAAGGGCCG------TGAGACGGTTCGTGCTCAGAAAATATGGTAT 192174
Query 53855 GCAATCCTCAAGAGCCAGGTGGAGACGGGAACGCCGTACATGTGCTACAAGGATTCGGTC 53914
|| || ||| || ||| ||||| || || || | ||| |||||||| | | |
Sbjct 192173 GCTATTCTCGAGGCGCAGACCGAGACCGGCACACCTTTCATTCTGTACAAGGACGCCGCC 192114
Query 53915 AACGAGAAGAGCAACCAGAAGAACATCGGCGTCATCAA 53952
||| ||||||||||||||||| | ||| ||||||
Sbjct 192113 AACCGCAAGAGCAACCAGAAGAATCTTGGCACCATCAA 192076
Score = 87.8 bits (96), Expect = 2e-12
Identities = 77/96 (80%), Gaps = 0/96 (0%)
Strand=Plus/Minus
Query 55484 CGCAACTCCCTGCTCGTGGCGCCAATGCCAACCGCGTCGACGGCTCAGATCATGGGCAAC 55543
|||||||| || ||||| ||||| |||||||| || ||||| | ||||||||||||
Sbjct 191564 CGCAACTCGCTTCTCGTTGCGCCGATGCCAACAGCCTCGACCTCGCAGATCATGGGCTTT 191505
Query 55544 AACGAGGCGTTCGAGCCGTACACGACCAACATCTAC 55579
|||||| |||||||| ||||| | |||||| |||
Sbjct 191504 AACGAGTGCTTCGAGCCATACACAAGCAACATTTAC 191469
>seq64
Length=404236
Score = 118 bits (130), Expect = 1e-21
Identities = 185/265 (70%), Gaps = 0/265 (0%)
Strand=Plus/Minus
Query 117152 CCAGTTCCGATACCCTCTGCACCATTCATCAGAATCATCGGCACGACAGGAACGTAGAAC 117211
|| |||||||| || || ||||| || ||||| |||||||||| || ||||| || | |
Sbjct 324971 CCGGTTCCGATGCCATCAGCACCGTTGATCAGGATCATCGGCAAGATTGGAACATACATC 324912
Query 117212 TCAGGCTCCACCTGCAGACCGTCGTCCGTGACGTACTTGAGCACCGCATTGTCACTCGGA 117271
|| || || | | |||||||| ||| |||| | |||| ||| | || ||| |
Sbjct 324911 TCCGGTTCGATGGTCTTGCCGTCGTCGGTGTTGTACGTCAGCAGCGCTTCATCGCTCTGG 324852
Query 117272 TCGAATATGTTCTTGGTCCACGGTGCTAGGCGAGTGAAAATGTAACGAGAGCTTGCAGCA 117331
| || || | | | || | || | ||| | |||||||||| || || |||
Sbjct 324851 TGAAAGATCGCCCTCGCAAGTGGAGACAGTCTCGTGTATATGTAACGAGGACTGGCCGCA 324792
Query 117332 TCCTTGCCACCAGCAAGACGCGTACCGAATTGTCCACTCGGCTCCAAGAGGTTCAGGTTG 117391
|| |||||||| ||||| | || || | ||||||||||| | || ||||| ||||
Sbjct 324791 TCGTTGCCACCTTGCAGACGTGATCCAAAATTGCCACTCGGCTCGAGGATGTTCATGTTG 324732
Query 117392 TTGGCGCCCACAAAGTTTTGAGCCA 117416
|||| ||||| ||||| |||||||
Sbjct 324731 TTGGAACCCACGAAGTTCTGAGCCA 324707
Score = 107 bits (118), Expect = 2e-18
Identities = 281/424 (66%), Gaps = 10/424 (2%)
Strand=Plus/Minus
Query 151876 CCGGTACCGATGCCCTCTGCACCGTTGACCAGAATCATCGGCACAATAGGGGCGTAAAAC 151935
||||| |||||||| || |||||||||| ||| |||||||||| || || | || | |
Sbjct 324971 CCGGTTCCGATGCCATCAGCACCGTTGATCAGGATCATCGGCAAGATTGGAACATACATC 324912
Query 151936 TCCGGCTCCACC-TGTTGACCGTCATCCATCACGTATTTCAAAACGGAATTGTCAGCCGG 151994
||||| || | | ||| ||||| || | ||| ||| | | | || | |
Sbjct 324911 TCCGGTTCGATGGTCTTG-CCGTCGTCGGTGTTGTACGTCAGCAGCGCTTCATCGCTCTG 324853
Query 151995 ATCGAATATC--CGTCG--AGTCATAGGACTCAAACGCGTGAAGATGTATCGGGAGCTGG 152050
| || ||| | ||| ||| ||| || | |||| | ||||| || | ||||
Sbjct 324852 GTGAAAGATCGCCCTCGCAAGT----GGAGACAGTCTCGTGTATATGTAACGAGGACTGG 324797
Query 152051 CCGCATCCTTGCCACCTGCCAGCCGCGTTCCAAACTGTCCAGAGGGCTCGAGGAGGTTGA 152110
||||||| ||||||||| ||| || | |||||| | ||| |||||||||| ||| |
Sbjct 324796 CCGCATCGTTGCCACCTTGCAGACGTGATCCAAAATTGCCACTCGGCTCGAGGATGTTCA 324737
Query 152111 GGTTGTTGGCGCCCACGAAATTCTGAGCCAAATTCACAATCGTGCCCTGCAGACTCGCTT 152170
|||||||| |||||||| |||||||||| | | || || |||||| | |
Sbjct 324736 TGTTGTTGGAACCCACGAAGTTCTGAGCCAGACCGATGATGGTTTGCTGCAGTGATGTCT 324677
Query 152171 CACCGTGGTGATACGCCGTCTGCTCCGCGATGTATCCCGCCAACTGCGCCACCTTCATGT 152230
|||||| | || || || | | | || | || |||| || | ||||||| | |
Sbjct 324676 CACCGTACGGGTATGCGGTGAGGCCGGAGACTGAACCAGCCAGCTCCACCACCTTGACAT 324617
Query 152231 CCGTCGTCAGGTTCTTCTTGAGACAGGCGTAAATCACCTTGCGCTGGGATGGTTTCAAAC 152290
| || ||||||| || ||| | ||| || || || ||||| || ||||| |
Sbjct 324616 CTTTCTTCAGGTTGCGGCGGAAACATGTGTACATGACTTTTCGCTGACCCGGCTTCAAGC 324557
Query 152291 CGTC 152294
||||
Sbjct 324556 CGTC 324553
Score = 95.1 bits (104), Expect = 1e-14
Identities = 242/360 (67%), Gaps = 14/360 (4%)
Strand=Plus/Minus
Query 152757 CACGTGGAACATGTTGAGGACCAAGCCCTTGATGTGCGATCCGTCAAGATCCGCGTCGGT 152816
||| || || | ||||| || || ||||||||||| || || || ||||| |||||
Sbjct 324087 CACTTGCAAGAAGTTGATGAGCAGACCCTTGATGTGAGAGCCATCGTGATCCTGATCGGT 324028
Query 152817 CATGATCATCAGACGACCGTAGCGCAGGTCACGTAGTGAC-CCGTAGACCTTTCCATGTT 152875
||||||||||||| | || || |||| | | |||| | |||| |||| |||||
Sbjct 324027 CATGATCATCAGATGGCCATAACGCAAG-CCTTTAGTATCTGTGTAGTCCTTCTTATGTT 323969
Query 152876 GAAGCCCGAGGATCTTTTTGAGGTTGGAAAATTCCTCATTATCGGTCACCTGTTTCACCG 152935
| || || | | ||| |||| ||| || || | || | | | ||| | | |
Sbjct 323968 GCAGACCCAAAAACTTCTTGATGTTCTGAATCTCGGCGTTCTTTGAAATCTGGTCGATGG 323909
Query 152936 TGGCATCCCGAACATTGCGCGGCTTTCCCCGGAGTGGAAACACGCCGAACGCGTTGCGGC 152995
||||| || |||||| | ||| ||||| ||||| || || || ||| || ||
Sbjct 323908 AAGCATCGCGCACATTGAGAATCTTACCCCGAAGTGGGAAGACACCAAACAGGTCTGGGT 323849
Query 152996 CTACAAC-GCTCAGACCGGCAATAGCAAG---GGCTTTCGCCGAGTCACCCTCGGTGATA 153051
||||| |||| | || |||| |||||| ||| || |||||||| || || |
Sbjct 323848 TGACAACAGCTC-GCCCTGCAAGAGCAAGCAAGGC---GGCAGAGTCACCTTCTGTCAAG 323793
Query 153052 ATAAGCGTACAGTCGTGAGACCG--ATGAGTACCGGCCCAGTTGGCGTCGTCAAGCTTGG 153109
|| || || || | || ||||| | ||||||||| ||||||||| ||||||||
Sbjct 323792 ATGAGTGTGCA--CTTGTGACCGTCCTTCGTACCGGCCTTGTTGGCGTCTGTAAGCTTGG 323735
Score = 87.8 bits (96), Expect = 2e-12
Identities = 90/115 (78%), Gaps = 2/115 (2%)
Strand=Plus/Minus
Query 119074 ACTGAACACGTTGGCTAGCTTGGCACCGTATCCGTTCCGACCACCGGTCACGCGCTG-CT 119132
|||| | | ||||| ||||||||||||||||||||||| ||||| ||| | || ||
Sbjct 322926 ACTGTAGATGTTGGTAAGCTTGGCACCGTATCCGTTCCGGCCACCAGTC-GTCTTTGCCT 322868
Query 119133 CCTCGTCGTTGTAGTTGGAGCTGGTCAAAAGGTGCCCAAAGATGAGCTCGGGGAT 119187
||||||||| ||||||||| || | |||||| || ||||| | |||||| ||
Sbjct 322867 CCTCGTCGTCGTAGTTGGACGAAGTAAGAAGGTGACCGAAGATCATCTCGGGAAT 322813
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 547215035531800
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |