Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Dothistroma_20septosporum_20[genbank_20GCA_5F002236515.1_202017-07- 28] 141 sequences; 30,033,957 total letters Query= NC_028112.1 Length=178262 Score E Sequences producing significant alignments: (Bits) Value seq80 206 3e-48 seq49 176 5e-39 seq53 127 2e-24 seq64 104 3e-17 seq55 98.7 1e-15 >seq80 Length=246247 Score = 206 bits (228), Expect = 3e-48 Identities = 805/1242 (65%), Gaps = 39/1242 (3%) Strand=Plus/Plus Query 80539 CCCCACATGTCGTGCTGCAAGATGCCCTCCGACGCCGGAGACCCCGCGAACGTCTCGTAC 80598 ||||||||||||| ||| | ||||| ||| | ||||| || | | | |||||||| Sbjct 191629 CCCCACATGTCGTACTGGAGCTCGCCCTGCGATACTGGAGAGCCTGGGTATGTCTCGTAA 191688 Query 80599 GGGCCCTCCGTCTTGGCCAGCTCACACGACTCCATAAGGGCCGCGTGATAAATGCACTCA 80658 || || | ||| || ||||| || || || ||| || || ||||| ||| |||| Sbjct 191689 GGACCGAGCTTCTCAGCAAGCTCGCATGAAGCCTCAAGAGCAGCATGATAGATGGTCTCA 191748 Query 80659 AAGACGCCCTTGTTCA-CACCGCGCGCCTGTGGGTCGTCGAACGACAAGCCCATCATCAT 80717 || | |||| | | || | |||| || |||||| | || || | || Sbjct 191749 AAAATCTGGATGTTAAGCTCCTTG-GCCTCAGGCGAGTCGAATGGCATGCGGAGAGCCAA 191807 Query 80718 GAACACGTCAGCCAGGCCCTGAACGCCGATGGCGATCGGGCGGTGGCGCTTGTTCGATCG 80777 ||| | ||||| || || | || || | | || || |||||||| ||| | || Sbjct 191808 GAAGGCATCAGCAAGACCGTTGACACCAAGACCAATGGGTCGGTGGCGGAAGTT-GCTCT 191866 Query 80778 CTCG-GCCTCCGGAATTGGGTAAAAGTTATTATCGATGACGCGGTTCAGGTTGCGTGTAA 80836 ||| ||||| || | |||||| |||| | |||||| ||||||||| ||||| | Sbjct 191867 TTCGTGCCTCTGGTACTGGGTAGTAGTTGATCTCGATGGTCTTGTTCAGGTTACGTGTGA 191926 Query 80837 CAACCCGTGTAACATCATGAAGTTTCTGAAAGTCGAAT---TGGTTCCCCTTCACAA--- 80890 | || || || || |||||||||| ||||| || | |||| | | | | Sbjct 191927 CCACTTTGGTGACCTCGTGAAGTTTCTTGAAGTCAAAAACCTCGTTCTCGATGTCGACGT 191986 Query 80891 ATGCCGGAAGGCTCAGGGACGCCAGATTGCACACGGCCACCTCTTCAGCATCTGTAAACT 80950 | | || || || || ||||||||||| || || ||||| || | | | | ||| Sbjct 191987 AGGTGGGCAGAGCAAGCGAAGCCAGATTGCAGACAGCGACCTCATCTGGAGCAGAGTACT 192046 Query 80951 CGACGATTTCCGTGCACAAATTAGAAGACTTAATTGTACCCAGGTTTTTCTGGTTTGACT 81010 | | ||| || |||||||||||||| ||| || || || || || |||||||| || Sbjct 192047 CCATGATCTCAGTGCACAAATTAGAGCTCTTGATGGTGCCAAGATTCTTCTGGTTGCTCT 192106 Query 81011 TGGCGTTGCAAGCGTCCTTGTAGCACATGTACGGGGTACCGGTCTCGACCTGTGACTTGA 81070 || |||| ||||||||||| ||| | || || ||||||||| ||| | || || Sbjct 192107 TGCGGTTGGCGGCGTCCTTGTACAGAATGAAAGGTGTGCCGGTCTCGGTCTGCGCCTCGA 192166 Query 81071 GGATGGCGTCCCAAATCTCGCGCGCCTTGACCACCTTGCGGAATTTGCCTTCGGCCACAT 81130 | || || | ||| || | | || ||| || ||| |||||||| | ||| Sbjct 192167 GAATAGCATACCATATTTTCTGAGCACGAACCGTCTCACGGCCCTTGCCTTCTCTCTCAT 192226 Query 81131 ACTTGGCGTA-AGCTTCGTCGAACTTGGCACCGTGAAGTTCAGTGAGGTCTGGGCACTCG 81189 | |||| ||| || | ||||| | |||||| || || | || | ||||| ||| Sbjct 192227 AACGCTCGTACAGC-TCCTTGAACTCGTCACCGTAAACATCCGACAGACCAGGGCATTCG 192285 Query 81190 TTAGGGCACATCAGGTGCCAGTCGGTGTCGTTC---TCTACAGCCTTCATGAAAGCG-TC 81245 || ||||||||||| ||| ||| ||||| || ||| || ||| |||| | || Sbjct 192286 TTGGGGCACATCAGAGTCCA---AGTGCCGTTCTGTTCGACACGCTGCAT-AAAGAGATC 192341 Query 81246 AGGGATCCAGAGGGCGGTGAACAGGTCGCG-GCAGCGCGCCTCCTCATCACCCTGGTTGA 81304 || |||||||| ||| ||||| ||||| ||| || | || || | || ||||| Sbjct 192342 GGGAATCCAGAGAGCGTAGAACAAATCGCGCGCA-CGAACTTCTTCCTTTCCATGGTTCT 192400 Query 81305 GGCGCAACTCGAGAAAGTCCATGATGTCCGCATGCCATGGCTCCAGATACACGGCGATCG 81364 ||| | || | || | ||||| ||| |||||||| ||||| || || | ||| | | Sbjct 192401 TGCGAAGGTCCATGAACTGCATGACGTCTGCATGCCACGGCTCAAGGTAGATGGCAAAAG 192460 Query 81365 ACCCCTTGCGACG------GCCACCCTGGTTGACGTAACGGGCAGTCGCGTTAAATACAC 81418 | ||| |||| ||||||||||| |||||||| ||||| |||| | || | Sbjct 192461 -CACCT--GGACGCTTGTTGCCACCCTGGTCAACGTAACGAGCAGTGTTGTTATAGACTC 192517 Query 81419 GCAACATAGGGATGATACCATCTGACTGACCGTTCGTACCCACGATACGCGACCCCTTGG 81478 | | ||| || | | ||| | || ||||| || || | || || || ||| Sbjct 192518 GTAGCATTGGTACAAGACCGTTGGATGTGCCGTTTGTGCCGCCAATGTATGAGCCTGTGG 192577 Query 81479 CGCGCACCTTGCTGA--TTGAAAGACCGATGCCACCTGACCACTTTGAAATCTGAGCACA 81536 | | | ||| ||| || |||||| || || || | ||| || ||| ||||| Sbjct 192578 CCCTGATGTTG-TGAACATG-AAGACCAATACCGCCAGCGTTCTTGGAGATCATGGCACA 192635 Query 81537 CCGGTTCATGGTCTCATAAATTCCCTCGATGCTATCTTTTTTCATGTCAAGCAAGAAACA 81596 || | ||| || || || || || ||||| || | |||||| | | |||||| || Sbjct 192636 TATCTTGAGGGTATCGTAGATACCATCAATGCTGTCATCCTTCATGGCCACCAAGAAGCA 192695 Query 81597 GCTTGACATCTGAGGGCTTTTTGAG--CCGGCATTGAACAGTGTTGGGGTCGCGTGAATG 81654 | || | || | || | | | | || ||| |||| |||||||| | || || || Sbjct 192696 GGATGCTAGCT--GCGCCTGTGGGGTACCAGCACTGAAAAGTGTTGGCGAAGCATGTGTG 192753 Query 81655 AAATAACGGTTTGACATCAGGTCATAGGTTTCCTTGACGCGTGGAATATCGTCACCGTGA 81714 || || ||||| || || || || | | | ||| || || || ||| Sbjct 192754 AAGTACTTCAACGACATGTAGTTGTATGTCTCAATCGCTGCTTCAATGTCTTCCCCATGA 192813 Query 81715 ATACCGATAGCTACACGCATAAACATGTACTGGGGCGTCTCG 81756 || |||| ||| |||||||| | ||| | || || ||||| Sbjct 192814 ATGCCGACAGCCACACGCATGATCATCTGTTGCGGTCTCTCG 192855 >seq49 Length=732227 Score = 176 bits (194), Expect = 5e-39 Identities = 175/227 (77%), Gaps = 0/227 (0%) Strand=Plus/Minus Query 27406 ATGCAAATCTTTGTCAAGACGCTTACCGGCAAGACTATTACTCTTGAGGTTGAGTCAGGT 27465 ||||| ||||| |||||||| || ||||||||||| || || || ||||| ||||| | Sbjct 364344 ATGCAGATCTTCGTCAAGACTCTCACCGGCAAGACCATCACCCTCGAGGTCGAGTCCAGC 364285 Query 27466 GATAGCATTGCAAATTTGAAGGCTAAAATTCAGGACAAGGAGGGAATTCCTCCAGACCAG 27525 || | ||| | ||| | ||| | || || |||||||||||||| || || || |||||| Sbjct 364284 GACACCATCGACAATGTCAAGTCGAAGATCCAGGACAAGGAGGGTATCCCACCTGACCAG 364225 Query 27526 CAGCGTCTAATTTTTGCTGGTAAGCAACTCGAGGATGATCGTACCCTAGCAGACTATAAT 27585 ||||| || |||||||| || ||||| |||||||||| |||||| || | ||||| || Sbjct 364224 CAGCGCCTGATTTTTGCAGGCAAGCAGCTCGAGGATGGTCGTACTCTGTCCGACTACAAC 364165 Query 27586 GTCCAAAAGGAATCCACTCTTCATCTAGTCTTGCGTCTTCGCGGTGG 27632 |||| || ||||| ||||| || | || | ||||| || ||||| Sbjct 364164 ATCCAGAAAGAATCGACTCTCCACTTGGTGCTTCGTCTCCGTGGTGG 364118 Score = 141 bits (156), Expect = 1e-28 Identities = 153/203 (75%), Gaps = 0/203 (0%) Strand=Plus/Minus Query 27430 ACCGGCAAGACTATTACTCTTGAGGTTGAGTCAGGTGATAGCATTGCAAATTTGAAGGCT 27489 ||||||||||| ||||| || ||||||||||| || | ||| | ||| ||||| Sbjct 364548 ACCGGCAAGACCATTACCCTCGAGGTTGAGTCGTCCGACACCATCGACAATGTGAAGAGC 364489 Query 27490 AAAATTCAGGACAAGGAGGGAATTCCTCCAGACCAGCAGCGTCTAATTTTTGCTGGTAAG 27549 || || ||||| ||||| || ||||| || |||||||| || | ||||| || || ||| Sbjct 364488 AAGATCCAGGATAAGGAAGGCATTCCACCTGACCAGCAACGCTTGATTTTCGCAGGCAAG 364429 Query 27550 CAACTCGAGGATGATCGTACCCTAGCAGACTATAATGTCCAAAAGGAATCCACTCTTCAT 27609 || |||||||| | ||| ||||| | ||||| || | || ||||| |||||| ||| Sbjct 364428 CAGCTCGAGGACGGTCGCACCCTGTCCGACTACAACATTCAGAAGGAGAGCACTCTCCAT 364369 Query 27610 CTAGTCTTGCGTCTTCGCGGTGG 27632 || ||| | |||||||| ||||| Sbjct 364368 CTCGTCCTCCGTCTTCGTGGTGG 364346 Score = 132 bits (146), Expect = 5e-26 Identities = 168/231 (73%), Gaps = 0/231 (0%) Strand=Plus/Minus Query 27406 ATGCAAATCTTTGTCAAGACGCTTACCGGCAAGACTATTACTCTTGAGGTTGAGTCAGGT 27465 |||||||| || |||||||| || ||||||||||| || || || || || || ||| Sbjct 364116 ATGCAAATTTTCGTCAAGACACTCACCGGCAAGACCATCACACTCGAAGTGGAATCATCC 364057 Query 27466 GATAGCATTGCAAATTTGAAGGCTAAAATTCAGGACAAGGAGGGAATTCCTCCAGACCAG 27525 || | || | || | ||| | || || || ||||||||||| || || || |||||| Sbjct 364056 GACACGATCGACAACGTCAAGTCAAAGATCCAAGACAAGGAGGGCATCCCACCGGACCAG 363997 Query 27526 CAGCGTCTAATTTTTGCTGGTAAGCAACTCGAGGATGATCGTACCCTAGCAGACTATAAT 27585 |||||||| || || || || ||||| || ||||| | || || || | || || || Sbjct 363996 CAGCGTCTCATCTTCGCCGGCAAGCAGCTTGAGGACGGCCGGACACTTTCGGATTACAAC 363937 Query 27586 GTCCAAAAGGAATCCACTCTTCATCTAGTCTTGCGTCTTCGCGGTGGACAA 27636 |||| ||||| |||||||| || | || ||||||| || || || ||| Sbjct 363936 ATCCAGAAGGAGTCCACTCTGCACTTGGTGCTGCGTCTCCGTGGAGGCCAA 363886 >seq53 Length=642053 Score = 127 bits (140), Expect = 2e-24 Identities = 141/188 (75%), Gaps = 0/188 (0%) Strand=Plus/Plus Query 27408 GCAAATCTTTGTCAAGACGCTTACCGGCAAGACTATTACTCTTGAGGTTGAGTCAGGTGA 27467 ||| | ||| || ||||| || || |||||||| || || || ||||| ||||| | || Sbjct 249961 GCACAGCTTCGTAAAGACCCTCACTGGCAAGACCATCACGCTCGAGGTCGAGTCGAGCGA 250020 Query 27468 TAGCATTGCAAATTTGAAGGCTAAAATTCAGGACAAGGAGGGAATTCCTCCAGACCAGCA 27527 | ||| | ||| | ||| || || ||||||||||||||||| || || |||||||| Sbjct 250021 CACCATCGACAATGTCAAGAGCAAGATCCAGGACAAGGAGGGAATCCCACCGGACCAGCA 250080 Query 27528 GCGTCTAATTTTTGCTGGTAAGCAACTCGAGGATGATCGTACCCTAGCAGACTATAATGT 27587 |||| | || || ||||| ||||| | ||||||| ||| ||||| | ||||| || | Sbjct 250081 GCGTTTGATCTTCGCTGGAAAGCAGTTGGAGGATGGTCGCACCCTCTCCGACTACAACAT 250140 Query 27588 CCAAAAGG 27595 ||| |||| Sbjct 250141 CCAGAAGG 250148 >seq64 Length=404236 Score = 104 bits (114), Expect = 3e-17 Identities = 279/423 (66%), Gaps = 8/423 (2%) Strand=Plus/Plus Query 31984 GACGGCCTCAAGCCTTCACAGCGCAAGGTGATATACGCCTGCCTCAAGAAGAACCTGTCG 32043 |||||| | ||||| ||||| || || || ||| | || || |||||| | Sbjct 324553 GACGGCTTGAAGCCGGGTCAGCGAAAAGTCATGTACACATGTTTCCGCCGCAACCTGAAG 324612 Query 32044 AGTGACATGAAGGTGGCGCAGCTGTCGGGCTACGTGGCAGAGCAAACGGCCTATCACCAC 32103 | || | ||||||| | ||||| | || | || | | | || || || | || Sbjct 324613 AAAGATGTCAAGGTGGTGGAGCTGGCTGGTTCAGTCTCCGGCCTCACCGCATACCCGTAC 324672 Query 32104 GGCGAGGCGTCGCTCCAGGGCACCATTGTCAACCTTGCTCAGAACTTTGTCGGTGCAAAT 32163 || ||| | || || ||| ||||| || || ||||||||||| || ||| | || Sbjct 324673 GGTGAGACATCACTGCAGCAAACCATCATCGGTCTGGCTCAGAACTTCGTGGGTTCCAAC 324732 Query 32164 AACCTGAACTTACTCGAGCCATCTGGACAGTTTGGGACCCGGCTCGCCGGTGGCAAGGAT 32223 ||| ||||| | |||||||| ||| | ||||| | || || |||||||| ||| Sbjct 324733 AACATGAACATCCTCGAGCCGAGTGGCAATTTTGGATCACGTCTGCAAGGTGGCAACGAT 324792 Query 32224 GCTGCGAGCTCCCGTTACATCTTCAC----CCGTCTCGCACCTTCGACGCGCAAGATTTT 32279 || || || | |||||||| | ||| | ||||| ||| | ||| | || ||| || Sbjct 324793 GCGGCCAGTCCTCGTTACATATACACGAGACTGTCTC-CACTTGCGA-GGGC--GATCTT 324848 Query 32280 CGACCCGTCGGACGATGCGGTGCTCAAGTACAATTTTGATGACGGTCAGCGGGTCGAGCC 32339 ||| | || || ||| |||| | |||||| || ||||| || |||| || Sbjct 324849 TCACCAGAGCGATGAAGCGCTGCTGACGTACAACACCGACGACGGCAAGACCATCGAACC 324908 Query 32340 GGTGTTCTACAGTCCGGTGCTTCCGATGATCTTGGTGAACGGTGCAGAAGGCATCGGAAC 32399 || | | || ||| | | ||||||||| || | |||||||| || ||||||||||| Sbjct 324909 GGAGATGTATGTTCCAATCTTGCCGATGATCCTGATCAACGGTGCTGATGGCATCGGAAC 324968 Query 32400 GGG 32402 || Sbjct 324969 CGG 324971 >seq55 Length=2050790 Score = 98.7 bits (108), Expect = 1e-15 Identities = 102/134 (76%), Gaps = 0/134 (0%) Strand=Plus/Minus Query 27499 GACAAGGAGGGAATTCCTCCAGACCAGCAGCGTCTAATTTTTGCTGGTAAGCAACTCGAG 27558 ||||||||||||||||| || ||||||||||| | || || || || ||||| |||||| Sbjct 1759835 GACAAGGAGGGAATTCCACCGGACCAGCAGCGCTTGATCTTCGCCGGCAAGCAGCTCGAG 1759776 Query 27559 GATGATCGTACCCTAGCAGACTATAATGTCCAAAAGGAATCCACTCTTCATCTAGTCTTG 27618 |||| || ||||| | ||||| || | || ||||| ||| || || || ||| | Sbjct 1759775 GATGGCCGCACCCTCTCCGACTACAACATTCAGAAGGAGAGCACCCTCCACCTCGTCCTC 1759716 Query 27619 CGTCTTCGCGGTGG 27632 ||||| || ||||| Sbjct 1759715 CGTCTGCGTGGTGG 1759702 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 570309394827920