Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Dothistroma_20septosporum_20[genbank_20GCA_5F002236515.1_202017-07-
28] 141 sequences; 30,033,957 total letters
Query= NC_031038.1
Length=222832
Score E
Sequences producing significant alignments: (Bits) Value
seq80 143 4e-29
seq55 134 2e-26
>seq80
Length=246247
Score = 143 bits (158), Expect = 4e-29
Identities = 619/977 (63%), Gaps = 30/977 (3%)
Strand=Plus/Plus
Query 76271 AGAGCTATAGATGCTAGATTACAAACGGCTACCTCATTAGCATTGGCATATTGTATTATC 76330
||||| | || || ||||| || || || ||||||| | | | || | || |||
Sbjct 191995 AGAGCAAGCGAAGCCAGATTGCAGACAGCGACCTCATCTGGAGCAGAGTACTCCATGATC 192054
Query 76331 TCCGTGCATAGATTACTACACTTGATAGTTCCAAGATTTTGTTGGTTGCTCTTTTTGTTA 76390
|| ||||| | |||| | |||||| || |||||||| | ||||||||||| |||
Sbjct 192055 TCAGTGCACAAATTAGAGCTCTTGATGGTGCCAAGATTCTTCTGGTTGCTCTTGCGGTTG 192114
Query 76391 CATGAGTCCTTATAAAGAACAAACGGAGTTCCAGTTTCAATCTGTGATTCGATAATAGAT 76450
| |||||| || |||| || || || || || || |||| | |||| |||||
Sbjct 192115 GCGGCGTCCTTGTACAGAATGAAAGGTGTGCCGGTCTCGGTCTGCGCCTCGAGAATAGCA 192174
Query 76451 TTCCAGACGACTCTAGCTTTTATTATA--GATTTGTATCGCTTC--------TCTCTTTC 76500
| ||| | |||| | | || || || | | ||||| ||
Sbjct 192175 TACCATA----------TTTTCTGAGCACGAACCGTCTCACGGCCCTTGCCTTCTCTCTC 192224
Query 76501 ATATTGTGTATATAACCGTTCAAATTCATCTCCCCAAACATCATCCAAACCAGGACATTC 76560
||| | || | | | || || || || ||||||| || |||||| |||||
Sbjct 192225 ATAACGCTCGTACAGCTCCTTGAACTCGTCACCGTAAACATCCGACAGACCAGGGCATTC 192284
Query 76561 ATTCGGACACATCAATGACCACTCACCATCTTCCTTAACCCGTTTCATAAAGAGATCAGG 76620
|| || ||||||| | ||| || | | | || || | |||||||||||| ||
Sbjct 192285 GTTGGGGCACATCAGAGTCCAAGTGCCGTTCTGTTCGACACGCTGCATAAAGAGATCGGG 192344
Query 76621 TATCCATAGAGCAATAAATAGATCTCGGGTTCTACGTTCTTCATTTCCTGTATTCTTTTT 76680
||||| ||||| || | ||| || | | | |||||| ||||| |||||
Sbjct 192345 AATCCAGAGAGCGTAGAACAAATCGCGCGCACGAACTTCTTCCTTTCCATGGTTCTTGCG 192404
Query 76681 AAGATCTAGGAACTCCATAATATCAGAATGCCATGGTTCTAGATATATCGCCATAACACC 76740
||| || | ||||| ||| | || | |||||| || || || || || || | | ||||
Sbjct 192405 AAGGTCCATGAACTGCATGACGTCTGCATGCCACGGCTCAAGGTAGATGGCAAAAGCACC 192464
Query 76741 CGGTCGTTTATTACCTCCCTGATCTATATATCTGGCAGTGTTATTATAAACTCTCAACAT 76800
|| || || || || ||||| || | || | |||||||| ||||| |||| | |||
Sbjct 192465 TGGACGCTTGTTGCCACCCTGGTCAACGTAACGAGCAGTGTTGTTATAGACTCGTAGCAT 192524
Query 76801 TGGAATAATGCCGTTAGATGTACCATTTGTTCCAGAAATATAACTTCCACATGCACGAAT 76860
||| | || ||||| ||||| || ||||| || ||| || || || | ||
Sbjct 192525 TGGTACAAGACCGTTGGATGTGCCGTTTGTGCCGCCAATGTATGAGCCTGTGGCCCTGAT 192584
Query 76861 ATTACTAATAGATAGGCCTATTCCTCCTGCCATTTTAGAGATTAGAGCACAGCGTTTCAA 76920
|| || | || || || || || || | || ||||| | ||||| || |
Sbjct 192585 GTTGTGAACATGAAGACCAATACCGCCAGCGTTCTTGGAGATCATGGCACATATCTTGAG 192644
Query 76921 TGTGTCATAGATGCCCTCTATACTATCATCCATCATG----TTAAGAAGAAAACAGCTAG 76976
|| || ||||| || || || || |||||| ||||| |||||| | |||||
Sbjct 192645 GGTATCGTAGATACCATCAATGCTGTCATCCTTCATGGCCACCAAGAAGCAGGATGCTAG 192704
Query 76977 ACATTTGATGATGAACAGTTCCTGCATTAAACAATGTAGGAGATGCATGAGTGAACCATT 77036
|| || || || ||| | || | ||| || || ||||| ||||| | |
Sbjct 192705 ----CTGCGCCTGTGGGGTACCAGCACTGAAAAGTGTTGGCGAAGCATGTGTGAAGTACT 192760
Query 77037 TTTCAGA-AAGTAGATTGTATGTTTCAATAACTGCTTCTATATCCCATTGATGAATTCCT 77095
| || | |||| |||||||| ||||| ||||||| || || |||||| ||
Sbjct 192761 TCAACGACATGTAG-TTGTATGTCTCAATCGCTGCTTCAATGTCTTCCCCATGAATGCCG 192819
Query 77096 ACAGCGACACGCATCAACATATGCTGAGGTCGTTCTACAGTCTTATTATTTATTTTCAAC 77155
||||| |||||||| | ||| || || |||| || || ||| | ||| | |
Sbjct 192820 ACAGCCACACGCATGATCATCTGTTGCGGTCTCTCGGCAACCTTGCCGTCAATTCTGAGA 192879
Query 77156 AAGTATGATTTTTCCAAAGTTTTAAAACCAAAATAGTTGTATGAAAAGTCTCTTTCGTAA 77215
| ||||||| |||| ||| || || || || || | ||| ||||| | || ||
Sbjct 192880 AGGTATGATCGCTCCAGAGTCTTGAAGCCGAAGTACTGGTAGTTGAAGTCGCGGTCATAG 192939
Query 77216 ATAATAACCGAATTTAG 77232
| ||| |||| || ||
Sbjct 192940 ACAATGGCCGAGTTCAG 192956
>seq55
Length=2050790
Score = 134 bits (148), Expect = 2e-26
Identities = 546/851 (64%), Gaps = 12/851 (1%)
Strand=Plus/Plus
Query 46339 TTTTGGTATTCACCTACACGTTTCTCGAAAAAATTAGTTTTGCCTTCCAATGATATATTT 46398
|| ||||| || || ||||| |||||||| || || || ||||| ||| || || ||
Sbjct 265120 TTCTGGTACTCGCCAACACGCTTCTCGAAGAAGTTGGTCTTGCCGCCCAGCGAAATGTTC 265179
Query 46399 TCCATAAAATCAAACGGATTAGTAACATTATAAAtttttttAAATCCTAATTCTGAAATC 46458
||||| || || || || || || | || || | || || || | | | | |
Sbjct 265180 TCCATGAAGTCGAAGGGGTTGGTGGCGTTGTAGAACTTCTTGTTGCCGAGTGCCAACAGT 265239
Query 46459 AGTCTATCTGCAACGAATTCTATATACGTTTTCATCATTTCACAATTCATTCCTATGAGT 46518
|| | ||| || |||||||| || || | ||| | ||| ||||| || | ||
Sbjct 265240 AGGCGATCGGCGACGAATTCAATGTATTGTGACATGAGGTCAGCGTTCATCCCCAGAAGC 265299
Query 46519 TTGACCGGTAGAGCCTCCGTAAGAAACTCTTGTTCAATAGTGACAGCATCCGATATTATC 46578
||| || ||||| || || | ||||| || || || ||||| || || | || ||
Sbjct 265300 TTGCATGGAAGAGCGTCTGTCAAGAACTCCTGCTCGATCGTGACGGCCTCGGTGATGAT- 265358
Query 46579 GATGTT-ACTGTTTCCTCACTTGGTGGATGCATCAAATGTTTAAACATTAAACATGCAAA 46637
| | | || ||| | || | | ||| ||| |||| | || || ||
Sbjct 265359 GCTCTGCACAAGGGCCTGGTTCGGCTTGTTCTTCAGATGCGAGAACAGAAGGCAGGCGAA 265418
Query 46638 ATCACAATGAAGGCCTTCATCTCTACTAATTAATTCGTTAGAAAATGTGAGCCCAGGCAT 46697
|| || | ||| ||||| | || | ||||| || ||||||||||| | |||
Sbjct 265419 GTCTGTGTGCATGCCCTCATCACGGGAGATGAGCTCGTTCGAGAATGTGAGCCCGGCCAT 265478
Query 46698 TAGTCCACGCTTTTTGAGCCAAAATATAGCCGCGAAAGATCCAGAAAAGAATATGCCTTC 46757
|| ||||| || || ||||| || ||||| || ||||||||||| ||||| || || ||
Sbjct 265479 GAGACCACGTTTCTTCAGCCAGAAGATAGCAGCAAAAGATCCAGAGAAGAAGATACCCTC 265538
Query 46758 TACAGCCGCGAATGCGACAAGTCTCTCTCCGTAACTGGCATCATTATGA---ATCCACCT 46814
|| || || ||||| | || | || | | | | || | | ||||| |
Sbjct 265539 AACGGCGGCAAATGCAATGAGACGGAGGGCGAATGTCGAGTTCTTGTCAGAAATCCATCG 265598
Query 46815 TTGAGCCCAATCAGCCTTTTTCTTTACACAAGGCATTGTTTCTATAGCATTAAAGAGAAA 46874
||||| |||||||| | | || || || | || || ||||| || || |
Sbjct 265599 CAACGCCCAGTCAGCCTTCCTGCGGATGCATGGGATGTTGTCGATGGCATTGAACAGGTA 265658
Query 46875 GtttttttCATCACTATCTTTAACATATGTATCTATTAAAAGACTATACATTTCTGAATG 46934
|| | | || | | |||||||| || | ||| ||| | || || ||
Sbjct 265659 TGTTCGCTGCTTTGGCTCGCTGATGTATGTATCGATGAGAAGGGAATATGTCTCGGAGTG 265718
Query 46935 AATGTTTTCAATAGCCATCTGAAATCCGTAAAAACATCTTGCTTCAGTAATCTGTACCTC 46994
||||| || || ||||| || ||||| || |||| ||| || | ||||| |||||
Sbjct 265719 GATGTTCTCCATCATGATCTGGAAGCCGTAGAAGCATCGTGCCTCCGGGATCTGCACCTC 265778
Query 46995 TGTACAAAATCGTTCAGACAAA-TTCTCATTCACTATTCCATCACTAGCAGCAAAAAATG 47053
| | || || || ||| | ||||| || || || ||||| || || || ||||
Sbjct 265779 AGAGCTGAAGCGCTC-GACGAGGTTCTCGTTGACAATGCCATCGGATGCGGCGAAGAATG 265837
Query 47054 CCAATACATGTTTAATAAAATATTTTTCATCG--GT--AGTCAGTTTATTCCAGTCATTG 47109
| | || ||| || || || ||| ||| || |||| | || |||||||| | |
Sbjct 265838 CGAGGACGTGTGAGATGAAGAATCGTTCGTCGTCGTTGAGTC-GCTTGTTCCAGTCGTGG 265896
Query 47110 ATATCTTTTGATATATCTACTTCTTCAGCTGTCCAGAATGACGCCTCTGCTTTTTTATAC 47169
| ||| || || | ||| | || ||||||||||||||||| ||||| || ||||| |||
Sbjct 265897 AGATCCTTCGACAGATCAATCTCCTCAGCTGTCCAGAATGAGGCCTCGGCCTTTTTGTAC 265956
Query 47170 ATATTCCATAT 47180
|| | ||||||
Sbjct 265957 ATTTGCCATAT 265967
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 712933143453120
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |