Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Dothistroma_20septosporum_20[genbank_20GCA_5F002236545.1_202017-07- 28] 570 sequences; 31,958,638 total letters Query= NC_001973.1 Length=161046 Score E Sequences producing significant alignments: (Bits) Value seq559 307 1e-78 seq110 152 5e-32 seq526 123 3e-23 seq221 93.3 4e-14 >seq559 Length=875383 Score = 307 bits (340), Expect = 1e-78 Identities = 556/796 (70%), Gaps = 23/796 (3%) Strand=Plus/Plus Query 116636 ATGTGGCGCATGTACAAAAAGGCCGAGGCGTCGTTCTGGACCGTCGAGGAGGTGGACCTG 116695 || |||| |||||||||||||||||||| || |||||||| | |||||| | || ||| Sbjct 604136 ATATGGCAAATGTACAAAAAGGCCGAGGCCTCATTCTGGACAGCTGAGGAGATTGATCTG 604195 Query 116696 TCCAAGGA-CACGAGCGACTGGGA---GCGCTTGAACGACAACGAGCGCCATTTCATCAA 116751 || ||||| | | | ||||||| | ||| | |||||| |||| || |||||| Sbjct 604196 TCGAAGGATCTCCA-CGACTGGAACAAGCGACTCAACGACGACGAACGATTCTTCATCTC 604254 Query 116752 GCACGTGCTGGCCTTTTTCGCCGCCAGCGACGGCATCGTCAACGAGAATCTGGTCGAGCG 116811 ||||| || || || |||||||| ||| ||||| ||||||||||| || |||||||| Sbjct 604255 ACACGTCCTCGCATTCTTCGCCGCATCCGATGGCATTGTCAACGAGAACCTCGTCGAGCG 604314 Query 116812 TTTC-GCTCAGGAGGTGCAGGTGGCCGAGGCGCGGTGCTTCTACGGCTTTCAGATCGCCA 116870 ||| |||| ||||||||| | | ||||| || |||||||||||||| |||||| | Sbjct 604315 CTTCAGCTC-TGAGGTGCAGATCCCGGAGGCACGATGCTTCTACGGCTTCCAGATCATGA 604373 Query 116871 TGGAGAACGTGCACTCGGAAATGTATTCGACCCTCATCGACACGTACGT--GCGCTCTTC 116928 |||||||| | ||||| || | ||||| |||||||| || ||| | ||| | Sbjct 604374 TGGAGAACATCCACTCCGAGACATATTCCCTTCTCATCGATACATACATCAGCGAGCCAA 604433 Query 116929 GGAGGAGAAGCTCCGTTTGTTGAACGCCATCGAGACGATGCCGTGCGTCAAAGAGAAGGC 116988 | | ||| | | |||| || |||||||| | || || ||| || |||||| Sbjct 604434 AGCAGCGAACATAC--CTGTTCAATGCCATCGACAACATCCCATGCATCCGCAGGAAGGC 604491 Query 116989 CGAGTGGGCGCTGCGCTGGATCGCCGGCAGAGAGGCCG-CCTTCGGCGAGCGCCTGGTGG 117047 || |||||| |||| ||||| | | || ||| || | |||| | || || | | Sbjct 604492 TGACTGGGCGTTGCGATGGATTTCTGACA-AGAACTCGACATTCGCCCTCCGTCTCATTG 604550 Query 117048 CCTTCGCGGCCGTCGAGGGCGTCTTCTTTTCGGGCAGTTTCGCCGCCATATTTTGGCTCA 117107 | || || ||||| ||||| ||||||| || || ||| || || || || ||||| | Sbjct 604551 CATTTGCCGCCGTTGAGGGTATCTTCTTCTCTGGATCTTTTGCTGCTATCTTCTGGCTGA 604610 Query 117108 AGAAACGCGGCCTCATGCCCGGCCTGACTTTCAGCAACGAGCTCATCTCCAGGGACGAGG 117167 ||||||| || |||||| |||| || || ||| ||||||||||||||| | || |||| Sbjct 604611 AGAAACGTGGTCTCATGGCCGGGCTCACATTCTCGAACGAGCTCATCTCCCGTGATGAGG 604670 Query 117168 GTCTGCATTGCGACTTTGCCTGTTTGCTGTTCAAGCATTTGGTGCAGCGACCGAGCGCGG 117227 | |||| ||||| ||||| | |||||| |||| || | | |||| | || Sbjct 604671 GCATGCACACAGACTTCGCCTGCCTTCTGTTCTCGCATCTGAAGAACAAGCCGAACCAGG 604730 Query 117228 CGCGCGT-CAGGGAGATCGTCACCGACGCGGTCGCCATCGAGCAGCGCTTCCTCACCGAA 117286 | | || ||| | ||| ||||||| || ||| | ||||||||| ||| | || || Sbjct 604731 CCCTTGTGCAGAG-CATCATCACCGAGGCCGTCACGATCGAGCAGGAGTTCTTGACAGAC 604789 Query 117287 GCGCTGCCGGTGC-GTCTGCTGGGACTCAATTGCGAAACGATGTCGCAATACATCGAGTT 117345 || || || ||| || ||||| | || | ||||| |||||||| || || Sbjct 604790 GCTCTTCC-ATGCAAGCTTCTGGGGATGAACGCTGGCCTCATGTCACAATACATTGAATT 604848 Query 117346 CGTCGCCGACAGGCTGCTGCTCGAGCTGGTCGGCGCCAAGCA---CTACAACACGCCCAA 117402 ||||||||| | || ||| | | | ||||| |||| | ||||||| | |||| Sbjct 604849 CGTCGCCGATCGCCTACTGTTGGCAC---TCGGCAACAAGAAGTTCTACAACGCCACCAA 604905 Query 117403 CCCGCTGGACTTTATG 117418 ||| | ||||| ||| Sbjct 604906 CCCCTTCGACTTCATG 604921 >seq110 Length=1833661 Score = 152 bits (168), Expect = 5e-32 Identities = 165/216 (76%), Gaps = 2/216 (1%) Strand=Plus/Plus Query 40690 ATGCAAATATTCGTAAAAACGCTCACGGGCAAAACCATCACCGTCGACGTCGAAGCCACC 40749 |||||||| ||||| || || ||||| ||||| || ||||| |||| || ||| | || Sbjct 1246265 ATGCAAATTTTCGTCAAGACACTCACCGGCAAGACTATCACACTCGAAGTGGAATCATCC 1246324 Query 40750 GACAGCGTGCA-AACGCTCAAGGAAAAAATTCTCGACAAAGAGGGCATCCCCGCGGACCA 40808 |||| | | |||| ||||| ||| || | ||||| ||||||||||| ||||||| Sbjct 1246325 GACACGATCGACAACG-TCAAGTCAAAGATCCAAGACAAGGAGGGCATCCCACCGGACCA 1246383 Query 40809 GCAACGACTCATCTACGCGGGCAAACAGCTGGACGACGAGCGCACCCTCAACGACTACAA 40868 ||| || ||||||| ||| ||||| ||||| || |||| || || || |||||||| Sbjct 1246384 GCAGCGTCTCATCTTCGCCGGCAAGCAGCTTGAGGACGGCCGGACACTTTCGGACTACAA 1246443 Query 40869 CATCCAGAAGGAGGCCACGCTGCATCTAGTGTTGCG 40904 ||||||||||||| |||| ||||| | ||| |||| Sbjct 1246444 CATCCAGAAGGAGTCCACCCTGCACTTGGTGCTGCG 1246479 Score = 114 bits (126), Expect = 1e-20 Identities = 140/191 (73%), Gaps = 0/191 (0%) Strand=Plus/Plus Query 40690 ATGCAAATATTCGTAAAAACGCTCACGGGCAAAACCATCACCGTCGACGTCGAAGCCACC 40749 ||||| || ||||| || || ||||| ||||| ||||||||| |||| ||||| ||| | Sbjct 1246037 ATGCAGATCTTCGTCAAGACTCTCACCGGCAAGACCATCACCCTCGAGGTCGAGTCCAGC 1246096 Query 40750 GACAGCGTGCAAACGCTCAAGGAAAAAATTCTCGACAAAGAGGGCATCCCCGCGGACCAG 40809 |||| | | | | ||||| || || | ||||| ||||| ||||| | |||||| Sbjct 1246097 GACACCATCGACAATGTCAAGTCGAAGATCCAGGACAAGGAGGGTATCCCACCTGACCAG 1246156 Query 40810 CAACGACTCATCTACGCGGGCAAACAGCTGGACGACGAGCGCACCCTCAACGACTACAAC 40869 || || || || | || ||||| ||||| || || | || || || |||||||||| Sbjct 1246157 CAGCGCCTGATTTTTGCAGGCAAGCAGCTCGAGGATGGTCGTACTCTGTCCGACTACAAC 1246216 Query 40870 ATCCAGAAGGA 40880 |||||||| || Sbjct 1246217 ATCCAGAAAGA 1246227 Score = 107 bits (118), Expect = 2e-18 Identities = 136/187 (73%), Gaps = 0/187 (0%) Strand=Plus/Plus Query 40712 TCACGGGCAAAACCATCACCGTCGACGTCGAAGCCACCGACAGCGTGCAAACGCTCAAGG 40771 |||| ||||| ||||| ||| |||| || || | |||||| | | | | | ||| Sbjct 1245831 TCACCGGCAAGACCATTACCCTCGAGGTTGAGTCGTCCGACACCATCGACAATGTGAAGA 1245890 Query 40772 AAAAAATTCTCGACAAAGAGGGCATCCCCGCGGACCAGCAACGACTCATCTACGCGGGCA 40831 || || | ||||| || ||||| || | ||||||||||| | || | || |||| Sbjct 1245891 GCAAGATCCAGGACAAGGAAGGCATTCCACCTGACCAGCAACGCTTGATTTTTGCAGGCA 1245950 Query 40832 AACAGCTGGACGACGAGCGCACCCTCAACGACTACAACATCCAGAAGGAGGCCACGCTGC 40891 ||||||| || |||| |||||||| |||||||||||||||||||||| ||| || | Sbjct 1245951 AACAGCTCGAGGACGGTCGCACCCTGTCCGACTACAACATCCAGAAGGAGAGCACTCTCC 1246010 Query 40892 ATCTAGT 40898 |||| || Sbjct 1246011 ATCTCGT 1246017 >seq526 Length=1022908 Score = 123 bits (136), Expect = 3e-23 Identities = 136/181 (75%), Gaps = 0/181 (0%) Strand=Plus/Minus Query 40699 TTCGTAAAAACGCTCACGGGCAAAACCATCACCGTCGACGTCGAAGCCACCGACAGCGTG 40758 |||||||| || ||||| ||||| |||||||| |||| ||||| | | ||||| | | Sbjct 770949 TTCGTAAAGACCCTCACTGGCAAGACCATCACGCTCGAGGTCGAGTCGAGCGACACCATC 770890 Query 40759 CAAACGCTCAAGGAAAAAATTCTCGACAAAGAGGGCATCCCCGCGGACCAGCAACGACTC 40818 | | ||||| || || | ||||| ||||| ||||| |||||||||| || | Sbjct 770889 GACAATGTCAAGAGCAAGATCCAGGACAAGGAGGGAATCCCACCGGACCAGCAGCGTTTG 770830 Query 40819 ATCTACGCGGGCAAACAGCTGGACGACGAGCGCACCCTCAACGACTACAACATCCAGAAG 40878 |||| ||| || || ||| |||| || | ||||||||| ||||||||||||||||||| Sbjct 770829 ATCTTCGCTGGAAAGCAGTTGGAGGATGGTCGCACCCTCTCCGACTACAACATCCAGAAG 770770 Query 40879 G 40879 | Sbjct 770769 G 770769 >seq221 Length=1251372 Score = 93.3 bits (102), Expect = 4e-14 Identities = 90/116 (78%), Gaps = 0/116 (0%) Strand=Plus/Minus Query 40783 GACAAAGAGGGCATCCCCGCGGACCAGCAACGACTCATCTACGCGGGCAAACAGCTGGAC 40842 ||||| ||||| || || |||||||||| || | |||| ||| ||||| ||||| || Sbjct 1048983 GACAAGGAGGGAATTCCACCGGACCAGCAGCGCTTGATCTTCGCCGGCAAGCAGCTCGAG 1048924 Query 40843 GACGAGCGCACCCTCAACGACTACAACATCCAGAAGGAGGCCACGCTGCATCTAGT 40898 || | ||||||||| |||||||||||| ||||||||| ||| || || || || Sbjct 1048923 GATGGCCGCACCCTCTCCGACTACAACATTCAGAAGGAGAGCACCCTCCACCTCGT 1048868 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 515215529063200