Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Dothistroma_20septosporum_20[genbank_20GCA_5F002236545.1_202017-07- 28] 570 sequences; 31,958,638 total letters Query= NC_002331.1 Length=178733 Score E Sequences producing significant alignments: (Bits) Value seq110 150 2e-31 seq526 102 9e-17 >seq110 Length=1833661 Score = 150 bits (166), Expect = 2e-31 Identities = 176/235 (75%), Gaps = 2/235 (1%) Strand=Plus/Minus Query 42950 CTATTGTCCTCCTCTTAAACGCAACACCAAATGCAATGTGCTCTCCTTTTGAATATTGTA 43009 |||||| ||||| | | ||||| |||||| |||| ||| |||||| || || ||||| Sbjct 1246498 CTATTGGCCTCCACGGAGACGCAGCACCAAGTGCAGGGTGGACTCCTTCTGGATGTTGTA 1246439 Query 43010 ATCAGCCAGAGTCCGCTCGTCATCTAGCTGCTTACCAGCGAATATGAGTCGCTGCTGGTC 43069 || | || ||||| |||| || |||||||| || ||||| ||||| ||||||||||| Sbjct 1246438 GTCCGAAAGTGTCCGGCCGTCCTCAAGCTGCTTGCCGGCGAAGATGAGACGCTGCTGGTC 1246379 Query 43070 GGCCGGCACGCTCTCCTTGTCCATGATTTTTTGTTTGAGCGTCG-CCACCGTGTCGCTCG 43128 | || | || ||||||||| ||| ||| |||| ||| | | | ||||||| | Sbjct 1246378 CGGTGGGATGCCCTCCTTGTCTTGGATCTTTGACTTGA-CGTTGTCGATCGTGTCGGATG 1246320 Query 43129 ATTCCACATCGACCGTGATGGTTTTGCCCGTTAGCGTCTTTACAAAGATTTGCAT 43183 ||||||| |||| ||||| || ||||| || || ||||| || || |||||||| Sbjct 1246319 ATTCCACTTCGAGTGTGATAGTCTTGCCGGTGAGTGTCTTGACGAAAATTTGCAT 1246265 Score = 102 bits (112), Expect = 9e-17 Identities = 137/191 (72%), Gaps = 0/191 (0%) Strand=Plus/Minus Query 42993 TCCTTTTGAATATTGTAATCAGCCAGAGTCCGCTCGTCATCTAGCTGCTTACCAGCGAAT 43052 || || || || ||||| || | |||||| || | || || |||||||| || || || Sbjct 1246227 TCTTTCTGGATGTTGTAGTCGGACAGAGTACGACCATCCTCGAGCTGCTTGCCTGCAAAA 1246168 Query 43053 ATGAGTCGCTGCTGGTCGGCCGGCACGCTCTCCTTGTCCATGATTTTTTGTTTGAGCGTC 43112 || || ||||||||||| | || | | |||||||||| ||| || |||| | Sbjct 1246167 ATCAGGCGCTGCTGGTCAGGTGGGATACCCTCCTTGTCCTGGATCTTCGACTTGACATTG 1246108 Query 43113 GCCACCGTGTCGCTCGATTCCACATCGACCGTGATGGTTTTGCCCGTTAGCGTCTTTACA 43172 | | |||||||| || || || |||| |||||||| ||||| || || ||||| || Sbjct 1246107 TCGATGGTGTCGCTGGACTCGACCTCGAGGGTGATGGTCTTGCCGGTGAGAGTCTTGACG 1246048 Query 43173 AAGATTTGCAT 43183 ||||| ||||| Sbjct 1246047 AAGATCTGCAT 1246037 >seq526 Length=1022908 Score = 102 bits (112), Expect = 9e-17 Identities = 139/194 (72%), Gaps = 0/194 (0%) Strand=Plus/Plus Query 42988 TGCTCTCCTTTTGAATATTGTAATCAGCCAGAGTCCGCTCGTCATCTAGCTGCTTACCAG 43047 ||| | |||| || || ||||| || | || || || | || || | |||||| |||| Sbjct 770763 TGCACACCTTCTGGATGTTGTAGTCGGAGAGGGTGCGACCATCCTCCAACTGCTTTCCAG 770822 Query 43048 CGAATATGAGTCGCTGCTGGTCGGCCGGCACGCTCTCCTTGTCCATGATTTTTTGTTTGA 43107 |||| || | ||||||||||| | || | | |||||||||| ||| || |||| Sbjct 770823 CGAAGATCAAACGCTGCTGGTCCGGTGGGATTCCCTCCTTGTCCTGGATCTTGCTCTTGA 770882 Query 43108 GCGTCGCCACCGTGTCGCTCGATTCCACATCGACCGTGATGGTTTTGCCCGTTAGCGTCT 43167 | | | ||||||||||| || || |||| ||||||||| ||||| || || |||| Sbjct 770883 CATTGTCGATGGTGTCGCTCGACTCGACCTCGAGCGTGATGGTCTTGCCAGTGAGGGTCT 770942 Query 43168 TTACAAAGATTTGC 43181 |||| ||| | ||| Sbjct 770943 TTACGAAGCTGTGC 770956 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 571813525799600