Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Dothistroma_20septosporum_20[genbank_20GCA_5F002236545.1_202017-07-
28] 570 sequences; 31,958,638 total letters
Query= NC_003225.3
Length=309286
Score E
Sequences producing significant alignments: (Bits) Value
seq176 125 1e-23
>seq176
Length=431326
Score = 125 bits (138), Expect = 1e-23
Identities = 543/844 (64%), Gaps = 16/844 (2%)
Strand=Plus/Plus
Query 94189 GAAGCCAAATTGCACACTGCAGTTTCCTCCGAATCACTGTACTGGACAATTTCAGTGCAC 94248
||||||| |||||| || || || |||| | || ||||| | || |||||||||
Sbjct 234762 GAAGCCAGATTGCAGACAGCGACCTCATCCGGAGCAGAGTACTCCATGATCTCAGTGCAC 234821
Query 94249 AAATTTGAAGACTTGATGATGCCGACATTTTCTTGGTTAGACTTTCTATTGATGGTATCC 94308
||||| || ||||||| |||| | ||| | ||||| ||| | ||| || |||
Sbjct 234822 AAATTAGAGCTCTTGATGGTGCCAAGATTCTTCTGGTTGCTCTTGCGGTTGGCGGCGTCC 234881
Query 94309 TTAAAGCACACAT--AAGGTGTTCCAGTTTCGATACGTGCAGAATTAATTTGGTCGAATA 94366
|| | || | || ||||||| || || ||| | | || ||| | |||
Sbjct 234882 TTGTA-CAGA-ATGAAAGGTGTGCCGGTCTCGGTCTGCGCCTCGAGAATAGCATACCATA 234939
Query 94367 ATGCACGTGCCTTCACCACCTCTTTACCTTTGCCTTCAGCCTCATATTTCTCGTACAACG 94426
| | || ||| ||| || |||||||| |||||| |||||||| |
Sbjct 234940 TTTTCTGAGCACGAACCGTCTCACGGCCCTTGCCTTCTCTCTCATAACGCTCGTACAGCT 234999
Query 94427 CCTTAAACTCTTCGCCATGGACGTCGGAAAGGCCAGGGCACTCGTGGGGGCACATCAGGG 94486
|||| ||||| || || | ||| || || || |||||||| |||| ||||||||| || |
Sbjct 235000 CCTTGAACTCGTCACCGTAGACATCCGACAGACCAGGGCATTCGTTGGGGCACATTAGAG 235059
Query 94487 ACCAATTCTTCCCAGCC-TTC-ACTCTCTCCATGAAGAGATCAGATACCCAGATAGCTGG 94544
|||| | || | ||| || | || ||| |||||||| | | ||||| |||
Sbjct 235060 TCCAAGTG--CCGTTCTGTTCGACACGCTGCATAAAGAGATCGGGAATCCAGAGAGCGTA 235117
Query 94545 GAAAAGATCCCTCGTCCTCAAATCTTCATTACCGGCATTCTTTCTGCAGTCAATAAAGTC 94604
||| | ||| | || | | ||||| || || ||||| | ||| || || |
Sbjct 235118 GAACAAATCGCGCGCACGAACTTCTTCCTTTCCATGGTTCTTGCGAAGGTCCATGAACTG 235177
Query 94605 CTTCACGTCCAGATGCCAATCAGAAATATAGATGGCTGCAGCTCCTCTCCTCTTGTCTCC 94664
| | ||||| ||||| || |||||||| ||| ||| | ||||| ||
Sbjct 235178 CATGACGTCTGCGTGCCACGGCTCAAGGTAGATGGCAAAAGCACCTGGACGCTTGTTGCC 235237
Query 94665 TCCCTGGCTAACCTTTTTCACAGAGACGTTAAAGATTTGGAGGAACGCCATGAGACCAGG 94724
|||||| ||| | ||| | ||| ||| | | || | | | ||||| |
Sbjct 235238 ACCCTGGTCAACGTAACGTGCAGTGTTGTTGTAGACTCGTAGCATTGGTACAAGACC--G 235295
Query 94725 GTGG--GTACCACTCCATGACGA-AATGGGGCTTCCTTTTGCCCTCAAATCATGAAAGTG 94781
||| || || | || || |||| ||| | ||||| | | |||| ||
Sbjct 235296 TTGGATGTGCCGTTTG-TGCCGCCAATGTATGAGCCTGTGGCCCTGATGTTGTGAACATG 235354
Query 94782 GATGCCGAGTCCTCCAGCAGTCTTGGAGATGATTGCCGCCTCCTTAAGAGTATCATAAAT 94841
| || | || ||||| |||||||||| || || ||| || ||||| || ||
Sbjct 235355 AAGACCAATACCGCCAGCGTTCTTGGAGATCATGGCACATATCTTGAGGGTATCGTAGAT 235414
Query 94842 ACCCTCAATGCTATCATCTTGAAGGCCCAGAAGGAAGCACGAGGAAAGTTGGGG-TGTGA 94900
||| |||||||| ||||| | | | ||| | |||||| || | || || | ||||
Sbjct 235415 ACCATCAATGCTGTCATCCTTCATGGCCACCAAGAAGCAGGATGCTAGCTGCGCCTGTGG 235474
Query 94901 CTGTTCCACAATTAAACAGTGTGGGGGAAGCATGGGTAAAATAGTGCCTCGACATGAGAT 94960
|| ||| | | || ||||| || |||||||| || || || | | ||||||| |
Sbjct 235475 G-GTACCAGCACTGAAAAGTGTTGGCGAAGCATGTGTGAAGTACTTCAACGACATGTAGT 235533
Query 94961 CATATGTTTCAATGACAGATTTGATGTCTGATCCGTGAATGCCGACAGCCACACGCATAA 95020
|||||| || || | | || |||||| |||||||||||||||||||||||||| |
Sbjct 235534 TATATGTCTCGATCGCTGCTTCAATGTCTTCCCCGTGAATGCCGACAGCCACACGCATGA 235593
Query 95021 TCAT 95024
||||
Sbjct 235594 TCAT 235597
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 989576772944350
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |