Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Dothistroma_20septosporum_20[genbank_20GCA_5F002236545.1_202017-07- 28] 570 sequences; 31,958,638 total letters Query= NC_003310.1 Length=196858 Score E Sequences producing significant alignments: (Bits) Value seq176 123 3e-23 >seq176 Length=431326 Score = 123 bits (136), Expect = 3e-23 Identities = 618/974 (63%), Gaps = 18/974 (2%) Strand=Plus/Plus Query 62943 GCAACAGATGCCAGATTACACACGGCTACCTCATTAGCATCCGCATATTGTATTATCTCA 63002 |||| || |||||||| || || || ||||||| | | | | || | || |||||| Sbjct 234756 GCAAGCGAAGCCAGATTGCAGACAGCGACCTCATCCGGAGCAGAGTACTCCATGATCTCA 234815 Query 63003 GTGCAAAGATTACTACACTTGATAGTTCCTAAATTTTGTTGATTACTCTTTTTGTTACAC 63062 ||||| | |||| | |||||| || || | ||| | || || ||||| ||| Sbjct 234816 GTGCACAAATTAGAGCTCTTGATGGTGCCAAGATTCTTCTGGTTGCTCTTGCGGTTGGCG 234875 Query 63063 GCATCCTTATAAAGAATGAATGGAGTACCAGTTTCAATCTGAGATTCTATAATCGCTTTC 63122 || ||||| || |||||||| || || || || || |||| | || | ||| || | | Sbjct 234876 GCGTCCTTGTACAGAATGAAAGGTGTGCCGGTCTCGGTCTGCGCCTCGAGAATAGCATAC 234935 Query 63123 CAGAC-----GA-CTCGAGCCTTTATTATAGATTTGTATCTCCTTTCTCTTTCGTATAGA 63176 || | || | ||| || | | | | | | | |||||| || || | Sbjct 234936 CATATTTTCTGAGCACGAACCGTC-TCACGGCCCT-----TGCCTTCTCTCTCATAACGC 234989 Query 63177 GTATACAA-TCGTTCGAACTCGTCTCCCCAAACATTGTCCAATCTAGGACATTCATCCGG 63235 |||| || || ||||||||| || | |||| || | ||| ||||| | || Sbjct 234990 TCGTACAGCTCCTT-GAACTCGTCACCGTAGACATCCGACAGACCAGGGCATTCGTTGGG 235048 Query 63236 ACACATCAACGACCACTCTCCGTCATCCTTCACTCGTTTCATAAAGAGATCAGGAATCCA 63295 ||||| | | ||| |||| | | || || | |||||||||||| |||||||| Sbjct 235049 GCACATTAGAGTCCAAGTGCCGTTCTGTTCGACACGCTGCATAAAGAGATCGGGAATCCA 235108 Query 63296 AAGAGCTATAAATAGATCTCTTGTTCTATGTTCCTCGTTTCCTGTATTCTTTTTAAGATC 63355 ||||| || | ||| | | | | ||| || ||||| ||||| ||| || Sbjct 235109 GAGAGCGTAGAACAAATCGCGCGCACGAACTTCTTCCTTTCCATGGTTCTTGCGAAGGTC 235168 Query 63356 GAGGAACGCCATAATATCAGAATGCCACGGTTCCAAGTATATGGCCATAACTCCAGGCCG 63415 | |||| ||| | || | |||||||| || | ||| ||||| | | | || || || Sbjct 235169 CATGAACTGCATGACGTCTGCGTGCCACGGCTCAAGGTAGATGGCAAAAGCACCTGGACG 235228 Query 63416 TTTGTTTCCTCCCTGATCTATGTATCTAGCGGTGTTATTATAAACTCTCAACATTGGAAT 63475 ||||| || ||||| || | ||| | || ||||| || || |||| | |||||| | Sbjct 235229 CTTGTTGCCACCCTGGTCAACGTAACGTGCAGTGTTGTTGTAGACTCGTAGCATTGGTAC 235288 Query 63476 AATACCGTTTGATATACCATTGGTACCGGAGATATAGCCTCCACTGGCACGAATATTACT 63535 || |||||| ||| | || || || ||| || || || |||| | || || Sbjct 235289 AAGACCGTTGGATGTGCCGTTTGTGCCGCCAATGTATGAGCCTGTGGCCCTGATGTTGTG 235348 Query 63536 AA-TTGATAGACCTATTCCCCCTGCCATTTTAGAGATTAATGCGCATCGTTTTAACGTGT 63594 || ||| ||||| || || || || | || ||||| | || ||| || | || | Sbjct 235349 AACATGA-AGACCAATACCGCCAGCGTTCTTGGAGATCATGGCACATATCTTGAGGGTAT 235407 Query 63595 CATAGATGCCTTCTATGCTATCATCGATCATGTTAAGTAGAAAACAGCTAGACATTTGGT 63654 | ||||| || || ||||| ||||| ||||| | | || ||| | | || Sbjct 235408 CGTAGATACCATCAATGCTGTCATCCTTCATGGCCACCAAGAAGCAGGATGCTAGCTGCG 235467 Query 63655 GACGAGTAGTTCCCGCATTAAATAAGGTAGGAGAAGCGTGCGTAAACCATTTTTCAGA-A 63713 | | || || ||| | || | || || ||||| || || || | || || | Sbjct 235468 CCTGTGGGGTACCAGCACTGAAAAGTGTTGGCGAAGCATGTGTGAAGTACTTCAACGACA 235527 Query 63714 AGTAGATTGTACGTCTCAATAGCTGAGTCTATATCCCATTGATGAATTCCTACTGCGACA 63773 |||| || || ||||| || |||| || || || ||||| || || || ||| Sbjct 235528 TGTAG-TTATATGTCTCGATCGCTGCTTCAATGTCTTCCCCGTGAATGCCGACAGCCACA 235586 Query 63774 CGCATTAACATGTGCTGAGGTCTTTCAACAATTTTGTTGTTTATTTTCAACAAGTAGGAT 63833 ||||| | ||| || || ||||| || ||| ||| | ||| | | | ||| ||| Sbjct 235587 CGCATGATCATCTGTTGCGGTCTCTCGGCAACCTTGCCATCAATTCTGAGAAGGTATGAT 235646 Query 63834 TTTTCCAAAGTTTTAAAACCAAAATAGTTGTATGAAAAGTCTCGTTCGTAAATAATAACC 63893 |||| ||| || || || || || | ||| ||||| || || || | ||| || Sbjct 235647 CGCTCCAGAGTCTTGAAGCCGAAGTATTGGTAGTTGAAGTCGCGGTCATAGACAATGGCC 235706 Query 63894 GAATTGAGCTTATC 63907 || || |||| ||| Sbjct 235707 GAGTTCAGCTCATC 235720 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 629813112549600