Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Dothistroma_20septosporum_20[genbank_20GCA_5F002236545.1_202017-07-
28] 570 sequences; 31,958,638 total letters
Query= NC_003391.1
Length=205719
Score E
Sequences producing significant alignments: (Bits) Value
seq176 134 2e-26
>seq176
Length=431326
Score = 134 bits (148), Expect = 2e-26
Identities = 626/981 (64%), Gaps = 32/981 (3%)
Strand=Plus/Plus
Query 65736 GCAACAGATGCCAGATTACAAACGGCTACCTCATTAGCATCCGCATATTGTATTATCTCA 65795
|||| || |||||||| || || || ||||||| | | | | || | || ||||||
Sbjct 234756 GCAAGCGAAGCCAGATTGCAGACAGCGACCTCATCCGGAGCAGAGTACTCCATGATCTCA 234815
Query 65796 GTGCAAAGATTACTACACTTGATGGTTCCTAAATTTTGTTGATTACTCTTTTTGTTACAC 65855
||||| | |||| | ||||||||| || | ||| | || || ||||| |||
Sbjct 234816 GTGCACAAATTAGAGCTCTTGATGGTGCCAAGATTCTTCTGGTTGCTCTTGCGGTTGGCG 234875
Query 65856 GCATCCTTATAAAGAATGAATGGAGTACCAGTTTCAATCTGAGATTCTATAATCGCTTTC 65915
|| ||||| || |||||||| || || || || || |||| | || | ||| || | |
Sbjct 234876 GCGTCCTTGTACAGAATGAAAGGTGTGCCGGTCTCGGTCTGCGCCTCGAGAATAGCATAC 234935
Query 65916 CAGAC-----GA-CTCGAGCCTTTATTATAGATTTGTATCTCTT---TTCTCTTTCGTAT 65966
|| | || | ||| || | | | | | ||| |||||| || ||
Sbjct 234936 CATATTTTCTGAGCACGAACCGTC-TCACGG--------CCCTTGCCTTCTCTCTCATAA 234986
Query 65967 AGTGTATACAA-TCGTTCGAACTCGTCTCCCCAAACATTGTCCAATCCAGGACATTCATC 66025
| |||| || || ||||||||| || | |||| || ||||| ||||| |
Sbjct 234987 CGCTCGTACAGCTCCTT-GAACTCGTCACCGTAGACATCCGACAGACCAGGGCATTCGTT 235045
Query 66026 CGGACACATCAACGACCACTCTCCGTCATCCTTCACTCGTTTCATAAAGAGATCAGGAAT 66085
|| ||||| | | ||| |||| | | || || | |||||||||||| |||||
Sbjct 235046 GGGGCACATTAGAGTCCAAGTGCCGTTCTGTTCGACACGCTGCATAAAGAGATCGGGAAT 235105
Query 66086 CCAAAGAGCTATAAATAAATCTCTGGTTCTATGTTCCTCGTTTCCTGTATTCTTTTTAAG 66145
||| ||||| || ||||| | | | | ||| || ||||| ||||| |||
Sbjct 235106 CCAGAGAGCGTAGAACAAATCGCGCGCACGAACTTCTTCCTTTCCATGGTTCTTGCGAAG 235165
Query 66146 ATCGAGGAACGCCATAATATCATAATGCCACGGTTCCAAGTATATGGCCATAACTCCAGG 66205
|| | |||| ||| | || |||||||| || | ||| ||||| | | | || ||
Sbjct 235166 GTCCATGAACTGCATGACGTCTGCGTGCCACGGCTCAAGGTAGATGGCAAAAGCACCTGG 235225
Query 66206 CCGTTTGTTTCCTCCCTGATCTATGTATCTAGCGGTGTTATTATAAACTCTCAACATTGG 66265
|| ||||| || ||||| || | ||| | || ||||| || || |||| | ||||||
Sbjct 235226 ACGCTTGTTGCCACCCTGGTCAACGTAACGTGCAGTGTTGTTGTAGACTCGTAGCATTGG 235285
Query 66266 AATAATACCATTGGATGTACCATTGGTCCCGGAGATATAGCTTCCACTTGCACGAATATT 66325
| || ||| |||||||| || || || ||| || || || | || | || ||
Sbjct 235286 TACAAGACCGTTGGATGTGCCGTTTGTGCCGCCAATGTATGAGCCTGTGGCCCTGATGTT 235345
Query 66326 ACTAA-TTGATAGACCTATTCCCCCTGCCATTTTAGAGATTAATGCGCATCGTTTTAACG 66384
|| ||| ||||| || || || || | || ||||| | || ||| || | |
Sbjct 235346 GTGAACATGA-AGACCAATACCGCCAGCGTTCTTGGAGATCATGGCACATATCTTGAGGG 235404
Query 66385 TATCATAGATGCCCTCTATACTATCATCCATCATGTTAAGTAGAAAACAGCTAGACATTT 66444
|||| ||||| || || || || |||||| ||||| | | || ||| || |
Sbjct 235405 TATCGTAGATACCATCAATGCTGTCATCCTTCATGGCCACCAAGAAGCAG---GATGCTA 235461
Query 66445 GGTGACGACT----AGTTCCCGCATTAAATAAGGTAGGAGAAGCGTGCGTAAACCATTTT 66500
| || || || || || ||| | || | || || ||||| || || || | ||
Sbjct 235462 GCTG-CGCCTGTGGGGTACCAGCACTGAAAAGTGTTGGCGAAGCATGTGTGAAGTACTTC 235520
Query 66501 TCAGA-AAGTAGATTGTACGTCTCAATAGCTGAGTCTATATCCCATTGATGAATTCCTAC 66559
|| | |||| || || ||||| || |||| || || || ||||| || ||
Sbjct 235521 AACGACATGTAG-TTATATGTCTCGATCGCTGCTTCAATGTCTTCCCCGTGAATGCCGAC 235579
Query 66560 TGCGACACGCATTAACATGTGCTGAGGTCTTTCAACGATCTTGTTGTTTATTTTCAACAA 66619
|| |||||||| | ||| || || ||||| || | | |||| | ||| | | |
Sbjct 235580 AGCCACACGCATGATCATCTGTTGCGGTCTCTCGGCAACCTTGCCATCAATTCTGAGAAG 235639
Query 66620 GTAGGATTTTTCCAAAGTTTTAAAACCAAAATAGTTGTATGAAAAGTCTCGTTCGTAAAT 66679
||| ||| |||| ||| || || || || || | ||| ||||| || || || |
Sbjct 235640 GTATGATCGCTCCAGAGTCTTGAAGCCGAAGTATTGGTAGTTGAAGTCGCGGTCATAGAC 235699
Query 66680 AATAACCGAGTTGAGTTTATC 66700
||| ||||||| || | |||
Sbjct 235700 AATGGCCGAGTTCAGCTCATC 235720
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 658168110518800
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |