Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Dothistroma_20septosporum_20[genbank_20GCA_5F002236545.1_202017-07-
28] 570 sequences; 31,958,638 total letters
Query= NC_004156.2
Length=231621
Score E
Sequences producing significant alignments: (Bits) Value
seq559 226 4e-54
seq176 196 7e-45
>seq559
Length=875383
Score = 226 bits (250), Expect = 4e-54
Identities = 569/849 (67%), Gaps = 33/849 (4%)
Strand=Plus/Plus
Query 125019 ATTTGGGAAATGTACAAAAAGGCTCAGGCCTCCTTTTGGACGGTCGAAGAGGTCGATCTG 125078
|| ||| |||||||||||||||| ||||||| || ||||| | || ||| | ||||||
Sbjct 604136 ATATGGCAAATGTACAAAAAGGCCGAGGCCTCATTCTGGACAGCTGAGGAGATTGATCTG 604195
Query 125079 TCCAAGGACCTGTACGATTGGGAGACTCGTTTGACTGAAACTGAGCGAGAGTTTATATCG 125138
|| ||||| || |||| ||| | | || | | || || ||| || || ||
Sbjct 604196 TCGAAGGATCTCCACGACTGGAACAAGCGACTCAACGACGACGAACGATTCTTCATCTCA 604255
Query 125139 CACATTTTGGCCTTCTTTGCCGGCTCCGATGGAATCGTCAACGACAATCT-GTTGACACG 125197
||| | | || ||||| |||| |||||||| || |||||||| || || || || ||
Sbjct 604256 CACGTCCTCGCATTCTTCGCCGCATCCGATGGCATTGTCAACGAGAACCTCGTCGA-GCG 604314
Query 125198 ATTC-TCTCAAGAGTTGACCATTCCAGAGGTGTCGTGCTTTTACGGATTCCAAATCATGA 125256
||| ||| ||| || || || |||| ||||| ||||| ||||| |||||||
Sbjct 604315 CTTCAGCTC-TGAGGTGCAGATCCCGGAGGCACGATGCTTCTACGGCTTCCAGATCATGA 604373
Query 125257 TTGAGAACGTGCACTCGGAAATGTACTCTACACTGATTGACATGTACATTCGCGATCC-- 125314
| |||||| | ||||| || | || || || || || | ||||| |||| ||
Sbjct 604374 TGGAGAACATCCACTCCGAGACATATTCCCTTCTCATCGATACATACATCAGCGAGCCAA 604433
Query 125315 -GCAACGTAAACACATGCTCTTTAACGCAATCGACACGGTGCCGTCTATACGTAAAAAGG 125373
||| || |||| | || || || || ||||||| | || | || || | ||||
Sbjct 604434 AGCAGCG--AACATA-CCTGTTCAATGCCATCGACAACATCCCATGCATCCGCAGGAAGG 604490
Query 125374 CTCAATGGGTGATTCGGTGGATCGATGACGACAAGTCTTCGTACGCCGACAGACTGGTGG 125433
|| | |||| | | || ||||| |||| | || || | | |||| | | || | |
Sbjct 604491 CTGACTGGGCGTTGCGATGGATTTCTGACAAGAACTCGACATTCGCCCTCCGTCTCATTG 604550
Query 125434 CATTCGCCGCCGTAGAGGGCATCTTCTTTTCGGGTAGTTTTGCGGCCATCTTTTGGCTCA 125493
|||| |||||||| ||||| |||||||| || || |||||| || ||||| ||||| |
Sbjct 604551 CATTTGCCGCCGTTGAGGGTATCTTCTTCTCTGGATCTTTTGCTGCTATCTTCTGGCTGA 604610
Query 125494 AGAAGCGCGGACTCATGCCCGGACTGACGCACAGTAACGAGTTTATATCTCGAGACGAGG 125553
|||| || || |||||| |||| || || | |||||| | || || || || ||||
Sbjct 604611 AGAAACGTGGTCTCATGGCCGGGCTCACATTCTCGAACGAGCTCATCTCCCGTGATGAGG 604670
Query 125554 GCCTACACTGTGACTTTGCCATTCTACTGTT-TCGCAACTATCTGCGTCCCGAGTGCAGA 125612
|| | ||| ||||| ||| || ||||| |||| ||||| | | || ||
Sbjct 604671 GCATGCACACAGACTTCGCCTGCCTTCTGTTCTCGC----ATCTGAAGAACAA--GCCGA 604724
Query 125613 TCCAG--CGATGAAAAGGTCATCAACATTGTAACCGATGCCGTGAGGATAGAACAAGAGT 125670
|||| | || || ||||| | ||||| ||||| | ||| || || ||||
Sbjct 604725 ACCAGGCCCTTGTGCAGAGCATCA------TCACCGAGGCCGTCACGATCGAGCAGGAGT 604778
Query 125671 TTCTAACCGAATCCCTACCGGTCAGCATGATTGGCATGAACTGCAAG-CTAATGTGCGAG 125729
| | || || | || || || | | || |||||| || | || |||| |
Sbjct 604779 TCTTGACAGACGCTCTTCCATGCAAGCTTCTGGGGATGAAC-GCTGGCCTCATGTCACAA 604837
Query 125730 TACATAGAGTTTGTGGCAGATCGTCTACTGTACGAGTTGATTGGCCGCAAGA---TTTAC 125786
||||| || || || || ||||| ||||||| | | ||| ||||| | |||
Sbjct 604838 TACATTGAATTCGTCGCCGATCGCCTACTGT---TGGCACTCGGCAACAAGAAGTTCTAC 604894
Query 125787 AACGCCAAGAATCCCTTTGATTTCATGACCAGCATATCACTAGAGGGTAAGACCAACTTT 125846
||||||| || ||||| || |||||| | ||| || || | || |||||||||||
Sbjct 604895 AACGCCACCAACCCCTTCGACTTCATGGAGAACATTTCGCTGGGCGGCAAGACCAACTTC 604954
Query 125847 TTCGAGAAG 125855
|||||||||
Sbjct 604955 TTCGAGAAG 604963
>seq176
Length=431326
Score = 196 bits (216), Expect = 7e-45
Identities = 389/568 (68%), Gaps = 6/568 (1%)
Strand=Plus/Minus
Query 96807 ACAAACGGCAACGCCAGTGGCCTAGTGCCAATGCTCAGAATGTACAATG-CAATGTCACG 96865
|||||||||| ||| || || || |||||||| || | ||||| || || ||||
Sbjct 235312 ACAAACGGCACATCCAACGGTCTTGTACCAATGCTACGAGTCTACAACAACACTG-CACG 235254
Query 96866 ATACGTTACACAGGGCGGCAATAAACGGCCAGGCGCTATAGCCGTCTACTTGGAACCTTG 96925
|||||| ||||| ||||| || || ||||| ||| | ||| ||||| | || || ||
Sbjct 235253 TTACGTTGACCAGGGTGGCAACAAGCGTCCAGGTGCTTTTGCCATCTACCTTGAGCCGTG 235194
Query 96926 GCACGCGGACGTTTTTGACTTTATCGAGATGCGCAAAAACTCTGGCTTTGAAGAGGCACG 96985
|||||| ||||| | | || || || | ||||| ||| ||| ||||| | ||
Sbjct 235193 GCACGCAGACGTCATGCAGTTCATGGACCTTCGCAAGAACCATGGAAAGGAAGAAGTTCG 235134
Query 96986 AGCCAGGGACTTGTTTTATGCACTCTGGGTGCCAGATTTGTTCATGAAGCGCGTCAACGA 97045
|| | || ||||| || || |||||| | || ||| | || ||| |||| ||| | |
Sbjct 235133 TGCGCGCGATTTGTTCTACGCTCTCTGGATTCCCGATCTCTTTATGCAGCGTGTCGAACA 235074
Query 97046 CGGTGGCTACTGGAGCCTAATGTGCCCCGACTCGTCACCCGGTCTGTCCGATTGCTGGGG 97105
||| |||| |||||||||||| || | || |||||||| ||| || ||
Sbjct 235073 GAACGGCACTTGGACTCTAATGTGCCCCAACGAATGCCCTGGTCTGTCGGATGTCTACGG 235014
Query 97106 CGAAGAGTTTGAGGCCAAGTACACGGCCTACGAGCAAGAGGGC-CGATACGTGAGACGAG 97164
|| ||||| ||| |||| | || ||| ||| ||| | |||||||||
Sbjct 235013 TGACGAGTTCAAGGAGCTGTACGAGCGTTATGAGAGAGAAGGCAAGGGCCGTGAGACGGT 234954
Query 97165 TCGATGCACGAGAACTGTGGAAGGCCATCGTGACGGCTCAGGTAGAGACTGGAACTCCGT 97224
||| ||| | || | ||| | || || | ||| ||| ||||| || || || |
Sbjct 234953 TCG-TGCTCAGAAAATATGGTATGCTATTCTCGAGGCGCAGACCGAGACCGGCACACCTT 234895
Query 97225 ACATTCTCTACAAGGATACCGTGAATCGCAACAGCAACCA-ACGCCACTTGGGCACCATC 97283
|||||| |||||||| ||| || ||||| |||||||| | | ||| |||||||||
Sbjct 234894 TCATTCTGTACAAGGACGCCGCCAACCGCAAGAGCAACCAGAAGAATCTT-GGCACCATC 234836
Query 97284 AAGGGCTCCAATCTGTGCACGGAAATTGTAGAGTACGCCTCTCCGGACGAGACGGCAGTT 97343
||| |||| ||| ||||||| || || | |||||| | ||||||| ||| || ||
Sbjct 234835 AAGAGCTCTAATTTGTGCACTGAGATCATGGAGTACTCTGCTCCGGATGAGGTCGCTGTC 234776
Query 97344 TGCGTTCTGGCATCGGTCAATCTGCCCA 97371
||| |||||| ||| | ||||||||
Sbjct 234775 TGCAATCTGGCTTCGCTTGCTCTGCCCA 234748
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 741053919953200
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |