Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Dothistroma_20septosporum_20[genbank_20GCA_5F002236545.1_202017-07- 28] 570 sequences; 31,958,638 total letters Query= NC_006639.1 Length=24748 Score E Sequences producing significant alignments: (Bits) Value seq221 113 7e-21 >seq221 Length=1251372 Score = 113 bits (124), Expect = 7e-21 Identities = 87/101 (86%), Gaps = 2/101 (2%) Strand=Plus/Plus Query 16433 GCTAAGCGTCATCGCA-GATCTCTTCGAGATAACATCCAAGGAATCACCAAGCCAGCTAT 16491 || |||||||| |||| ||||| | || || |||||||| || ||||||||||||||||| Sbjct 1008178 GCCAAGCGTCACCGCAAGATCT-TGCGCGACAACATCCAGGGTATCACCAAGCCAGCTAT 1008236 Query 16492 CCGTCGTCTGGCTCGTCGTGGTGGAGTCAAGCGTGTCTCTG 16532 ||| ||||| || ||||||||||| ||||||||| |||||| Sbjct 1008237 CCGACGTCTCGCGCGTCGTGGTGGTGTCAAGCGTATCTCTG 1008277 Score = 95.1 bits (104), Expect = 2e-15 Identities = 120/165 (73%), Gaps = 0/165 (0%) Strand=Plus/Plus Query 16528 CTCTGGATTGGTCTATGAAGAGATTCGTGATGTTTTGAAGATCTTCCTCAAGACCGTTAT 16587 |||| | || |||| ||||||| ||||| ||| | |||| ||||||| || || || Sbjct 1008335 CTCTCCAGTGATCTACGAAGAGACTCGTGGTGTCCTCAAGACCTTCCTCGAGGGTGTCAT 1008394 Query 16588 CCATGATGCTTTCCACTATACCGAGCACGCTAAACGTAAGACTGTCACCTCCATGGATAT 16647 || ||||| || || ||||||||||| || || ||||||||||||||| | || | Sbjct 1008395 CCGCGATGCCGTCACATACACCGAGCACGCCAAGCGCAAGACTGTCACCTCCCTCGACGT 1008454 Query 16648 CGTCTATGCATTGAAACGTCAAGGCCGTAAGATTTATGGTTTTGG 16692 ||||| || | || || |||||||| | | || ||||| || Sbjct 1008455 TGTCTACGCCCTCAAGCGACAAGGCCGCACCCTCTACGGTTTCGG 1008499 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 79074678845010