Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Dothistroma_20septosporum_20[genbank_20GCA_5F002236545.1_202017-07- 28] 570 sequences; 31,958,638 total letters Query= NC_007921.1 Length=147544 Score E Sequences producing significant alignments: (Bits) Value seq176 172 5e-38 seq110 134 1e-26 seq526 107 2e-18 seq221 105 6e-18 >seq176 Length=431326 Score = 172 bits (190), Expect = 5e-38 Identities = 916/1443 (63%), Gaps = 29/1443 (2%) Strand=Plus/Plus Query 145058 TTGACGACCTGAAACTCGCCGGCCAACACACGACGCAAATACACGTTAGACGTGAAGGGT 145117 ||||||||||| |||||||| |||||||||||||| | || | ||| ||| | || Sbjct 234189 TTGACGACCTGGAACTCGCCAGCCAACACACGACGAGAGTAAATGTTGCTTGTGTATGGC 234248 Query 145118 TCAAAAGACTCGTTATTGCCCAGGATTTGAGCGGTCGTTGCGGTGGGCATGTACGCCACC 145177 || || |||||||| ||||| ||| || | ||||| || || ||||| ||| || Sbjct 234249 TCGAAGCACTCGTTAAAGCCCATGATCTGCGAGGTCGAGGCTGTTGGCATCGGCGCAACG 234308 Query 145178 AATAATGAATTGCGCAGGCCGTGCTTCTTGATGTCTTCCTTTAGCGTACCCCAATCCCAT 145237 | | || ||||||| ||||||| ||| | |||| || | |||| ||||| Sbjct 234309 AGAAGCGAGTTGCGCACACCGTGCTGGGCGATCTTGCCCTTGAGTGCGGCCCAGTCCCAG 234368 Query 145238 AGCGAAGTCGGCCTCACGTCCCACATGTCGTACTGCAAAATGCCCT-CGCTGGCGGGGCT 145296 || || || || | |||||||||||||||| | ||||| || | | || Sbjct 234369 AGGTCGGTAGGAGTCTTGCCCCACATGTCGTACTGGAGCTCGCCCTGCGAT-ACTGGAGA 234427 Query 145297 GCCTTGAAAGGAACTGTAACTGCCCCAAGTT-TTGGCGAGCTCGCAACTCGCCTCCAGAG 145355 |||| | | | |||| | || | || | || |||||||| ||||| |||| Sbjct 234428 GCCTGGGTATGTCTCGTAA-GGACCGAGCTTCTCAGCAAGCTCGCATGAAGCCTCAAGAG 234486 Query 145356 CGCCGAAATAAATTGTCTCGGCAATTTGCCTGTTGAGCAGCATCGCTTCATCGCTCTCGT 145415 | | ||| || ||||| ||| || |||| ||| | | || ||| ||| Sbjct 234487 CAGCATGATAGATGGTCTCAAAAATCTGGATGTTAAGCTCCTTGGCCTCAGGCGAGTCGA 234546 Query 145416 ACGGCATGCGCAGCAGTACAAAAGCATCGGCGAGCCCCTGTATTCCCACGCCGATGGGCC 145475 | |||||||| || | || ||||| || || || | | || | || ||||| | Sbjct 234547 ATGGCATGCGGAGAGCCAAGAAGGCATCAGCAAGACCGTTGACACCAAGACCAATGGGTC 234606 Query 145476 GATGTTTCATGTTGCTCATCCTCGCCGACTCG-ATAGGATATCGATTACGGTCGATAATT 145534 | || | ||||||| | | ||| || | | || || || ||||| | Sbjct 234607 GGTGGCGGAAGTTGCTCTTTCGTGCC-TCTGGTACCGGGTAGTAGTTGATCTCGATGGTC 234665 Query 145535 TTATTCAAGTTTCGCACTACTACCTTTGTAATGTGCCGCAACTTTTCAAAGTCAAACCGA 145594 || |||| ||| || || || || || | | | | || | |||||||| | Sbjct 234666 TTGTTCAGGTTACGTGTGACCACTTTGGTGACCTCGTGAAGTTTCTTGAAGTCAAA---A 234722 Query 145595 GCCTCG---TCAACGACCACACAGCTATTGACGGCGATCGACGCCAAATTACAAACTGCC 145651 ||||| || | | | || || | | || | ||| |||| ||| || || || Sbjct 234723 ACCTCGTTCTCGATGTCGACGTAGGTGGGCAGAGCAAGCGAAGCCAGATTGCAGACAGCG 234782 Query 145652 GTCTCCTCGGCGTCGCTGTATTGTACGATCTCGGCGCACAAATTGCTACATTTGATGGTT 145711 ||| || | | ||| | | |||||| | ||||||||| | |||||||| Sbjct 234783 ACCTCATCCGGAGCAGAGTACTCCATGATCTCAGTGCACAAATTAGAGCTCTTGATGGTG 234842 Query 145712 CCCAGATTTTGCTGATTACTTTTCCTGTTGCACGCGTCCTTGTAGAGCATGTACGGTCCG 145771 || ||||| | ||| || || || | |||| ||||||||||| || ||| | ||| | Sbjct 234843 CCAAGATTCTTCTGGTTGCTCTTGCGGTTGGCGGCGTCCTTGTACAGAATGAAAGGTGTG 234902 Query 145772 CCAGTCTCCACCTGCGTCTCCACGATA--AAACGGTGCAAGTCCTGCGCACGCACCTGCT 145829 || ||||| ||||| ||| | ||| | || | | | ||| ||||| ||| || Sbjct 234903 CCGGTCTCGGTCTGCGCCTCGAGAATAGCATACCAT--ATTTTCTGAGCACGAACCGTCT 234960 Query 145830 GCTGGTAGCGGCCCTCTTCTTCGTATTTCCTGTAGAGCTCCTCAAACGCGGAACCGTAGC 145889 || ||| ||| || || | ||| ||||||| ||| || ||||||| Sbjct 234961 CACGGCCCTTGCCTTCTCTCTCATAACGCTCGTACAGCTCCTTGAACTCGTCACCGTAGA 235020 Query 145890 AATCGGACAGGCCGGGACACTTGTTGGGACACATCAGCGACCATACGCCGTTGGCGTTGA 145949 ||| ||||| || || || | |||||| ||||| || | ||| |||||| | || Sbjct 235021 CATCCGACAGACCAGGGCATTCGTTGGGGCACATTAGAGTCCAAGTGCCGTTCTGTTCGA 235080 Query 145950 CGCGCTCCATAAACAAATCTGGCACCCACAGCGCGTACATCAAGTCGCGCGCTTTGCAAT 146009 | |||| |||||| | ||| || | ||| || ||||| | ||| |||||||| | | | Sbjct 235081 CACGCTGCATAAAGAGATCGGGAATCCAGAGAGCGTAGAACAAATCGCGCGC-ACGAACT 235139 Query 146010 CCTCAGCACCCATGTTTCGCTTCAAATT--AAGCACACTATAGATGTCCGCGTGCCACGG 146067 || ||||| ||| || | | | || || || ||| ||||||||||| Sbjct 235140 TCTTCCTTTCCATGGTTCTTGCGAAGGTCCATGAACTGCAT-GACGTCTGCGTGCCACGG 235198 Query 146068 TTCAATATAGACGGCGAGGGCTCCTTTTCG---TTTGCCACCCTGGTCCACGTGACGTAC 146124 |||| |||| ||| | || ||| || |||||||||||||| |||| |||| | Sbjct 235199 CTCAAGGTAGATGGCAAAAGCACCTGGACGCTTGTTGCCACCCTGGTCAACGTAACGTGC 235258 Query 146125 CATGTTGTTAAAGACGCGCACCATGGGCTCGACGCCGCTGGCTACGCCGTTCGTAGAGTT 146184 ||||||| |||| || | ||| || | | ||| ||| | |||||| || | Sbjct 235259 AGTGTTGTTGTAGACTCGTAGCATTGGTACAAGACCGTTGGATGTGCCGTTTGTGCCGCC 235318 Query 146185 TATTCTGGTGCCGCGGGAGCGCACGCAATGAACATTCACGCCGAGACCGCCGCCGTACTT 146244 || | ||| || | | | ||||||| | || | |||||| ||| ||| Sbjct 235319 AATGTATGAGCCTGTGGCCCTGATGTTGTGAACATGAAGACCAATACCGCCAGCGTTCTT 235378 Query 146245 GGATATAGCGGCGCAGTCGCCGAGCGTCTCGTAGATGCCGTCAATGCTATC--GCTTCGA 146302 ||| || ||| || ||| || |||||||| || |||||||| || |||| Sbjct 235379 GGAGATCATGGCACATATCTTGAGGGTATCGTAGATACCATCAATGCTGTCATCCTTC-- 235436 Query 146303 ATGCCGAGCAGAAAGCACGAGCACATCTGCGCCATCGGCGTCCCCGCCGAGAACAACGTC 146362 ||| | | || ||||| || | ||||||| || || || || ||| | || Sbjct 235437 ATGGCCACCAAGAAGCAGGATGCTAGCTGCGCCTGTGGGGTACCAGCACTGAAAAGTGTT 235496 Query 146363 GGGCTCGCGTGCGTAAACATTTTTCGGC-TCATCATCCGATACGTTTCGATAGCGTCTTG 146421 || || || || || | ||| | ||| ||| || ||||| || ||| Sbjct 235497 GGCGAAGCATGTGTGAA-GTACTTCAACGACATGTAGTTATATGTCTCGATCGCTGCTTC 235555 Query 146422 AATGTCGTCGCCATGAATGCCCAAAGCGACGCGCATGAGCATGTGTTGGGGCCGCTCCGC 146481 |||||| || || |||||||| | ||| || ||||||| ||| ||||| || | ||| || Sbjct 235556 AATGTCTTCCCCGTGAATGCCGACAGCCACACGCATGATCATCTGTTGCGGTCTCTCGGC 235615 Query 146482 CAC 146484 || Sbjct 235616 AAC 235618 >seq110 Length=1833661 Score = 134 bits (148), Expect = 1e-26 Identities = 166/227 (73%), Gaps = 0/227 (0%) Strand=Plus/Minus Query 131008 CCACCGCGCAAACGCAGCACTAAATGTATGGTCGACTCCTTTTGAATGTTGTAATCGCTC 131067 ||||| || | ||| ||||| || || | ||||| || || || |||||||| ||| | Sbjct 1246263 CCACCACGGAGACGAAGCACCAAGTGGAGAGTCGATTCTTTCTGGATGTTGTAGTCGGAC 1246204 Query 131068 ATGGTGCGCGAGTCCTCTAGCTGCTTGCCTGCGTAGATTAAACGCTGCTGGTCCGGAGGG 131127 | || || ||||| |||||||||||||| | || | ||||||||||| || ||| Sbjct 1246203 AGAGTACGACCATCCTCGAGCTGCTTGCCTGCAAAAATCAGGCGCTGCTGGTCAGGTGGG 1246144 Query 131128 ATTCCTTCTTTGTCGGTGATTTTCTGCTTGAGCTGCTCCACAGTATCGGTGGACTCGATG 131187 || || || ||||| ||| ||| ||||| | || | || ||| ||||||||| Sbjct 1246143 ATACCCTCCTTGTCCTGGATCTTCGACTTGACATTGTCGATGGTGTCGCTGGACTCGACC 1246084 Query 131188 TCGACGGTAACGGTTTTACCGGTTAGAGTTTTTACGAAAATCTGCAT 131234 |||| ||| | ||| || ||||| ||||| || ||||| |||||||| Sbjct 1246083 TCGAGGGTGATGGTCTTGCCGGTGAGAGTCTTGACGAAGATCTGCAT 1246037 Score = 123 bits (136), Expect = 2e-23 Identities = 164/228 (72%), Gaps = 0/228 (0%) Strand=Plus/Minus Query 131007 GCCACCGCGCAAACGCAGCACTAAATGTATGGTCGACTCCTTTTGAATGTTGTAATCGCT 131066 ||| || || | ||||||||| || || | ||| |||||||| || |||||||| || Sbjct 1246492 GCCTCCACGGAGACGCAGCACCAAGTGCAGGGTGGACTCCTTCTGGATGTTGTAGTCCGA 1246433 Query 131067 CATGGTGCGCGAGTCCTCTAGCTGCTTGCCTGCGTAGATTAAACGCTGCTGGTCCGGAGG 131126 | || || |||||| ||||||||||| ||| |||| | ||||||||||||||| || Sbjct 1246432 AAGTGTCCGGCCGTCCTCAAGCTGCTTGCCGGCGAAGATGAGACGCTGCTGGTCCGGTGG 1246373 Query 131127 GATTCCTTCTTTGTCGGTGATTTTCTGCTTGAGCTGCTCCACAGTATCGGTGGACTCGAT 131186 ||| || || ||||| ||| || ||||| | || | || |||| || || | Sbjct 1246372 GATGCCCTCCTTGTCTTGGATCTTTGACTTGACGTTGTCGATCGTGTCGGATGATTCCAC 1246313 Query 131187 GTCGACGGTAACGGTTTTACCGGTTAGAGTTTTTACGAAAATCTGCAT 131234 |||| || | || || ||||| || || || |||||||| ||||| Sbjct 1246312 TTCGAGTGTGATAGTCTTGCCGGTGAGTGTCTTGACGAAAATTTGCAT 1246265 >seq526 Length=1022908 Score = 107 bits (118), Expect = 2e-18 Identities = 134/184 (73%), Gaps = 0/184 (0%) Strand=Plus/Plus Query 131042 ACTCCTTTTGAATGTTGTAATCGCTCATGGTGCGCGAGTCCTCTAGCTGCTTGCCTGCGT 131101 || |||| || |||||||| ||| | |||||| ||||| | |||||| || ||| Sbjct 770766 ACACCTTCTGGATGTTGTAGTCGGAGAGGGTGCGACCATCCTCCAACTGCTTTCCAGCGA 770825 Query 131102 AGATTAAACGCTGCTGGTCCGGAGGGATTCCTTCTTTGTCGGTGATTTTCTGCTTGAGCT 131161 |||| ||||||||||||||||| |||||||| || ||||| ||| || ||||| | Sbjct 770826 AGATCAAACGCTGCTGGTCCGGTGGGATTCCCTCCTTGTCCTGGATCTTGCTCTTGACAT 770885 Query 131162 GCTCCACAGTATCGGTGGACTCGATGTCGACGGTAACGGTTTTACCGGTTAGAGTTTTTA 131221 || | || ||| | ||||||| |||| || | ||| || || || || || |||| Sbjct 770886 TGTCGATGGTGTCGCTCGACTCGACCTCGAGCGTGATGGTCTTGCCAGTGAGGGTCTTTA 770945 Query 131222 CGAA 131225 |||| Sbjct 770946 CGAA 770949 >seq221 Length=1251372 Score = 105 bits (116), Expect = 6e-18 Identities = 106/138 (77%), Gaps = 0/138 (0%) Strand=Plus/Plus Query 131008 CCACCGCGCAAACGCAGCACTAAATGTATGGTCGACTCCTTTTGAATGTTGTAATCGCTC 131067 ||||| |||| ||| || || | || | ||| |||||| ||||||||||| ||| Sbjct 1048850 CCACCACGCAGACGGAGGACGAGGTGGAGGGTGCTCTCCTTCTGAATGTTGTAGTCGGAG 1048909 Query 131068 ATGGTGCGCGAGTCCTCTAGCTGCTTGCCTGCGTAGATTAAACGCTGCTGGTCCGGAGGG 131127 | |||||| ||||| ||||||||||| ||| |||| || |||||||||||||| || Sbjct 1048910 AGGGTGCGGCCATCCTCGAGCTGCTTGCCGGCGAAGATCAAGCGCTGCTGGTCCGGTGGA 1048969 Query 131128 ATTCCTTCTTTGTCGGTG 131145 ||||| || ||||| ||| Sbjct 1048970 ATTCCCTCCTTGTCTGTG 1048987 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 472009436908800