Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Dothistroma_20septosporum_20[genbank_20GCA_5F002236545.1_202017-07-
28] 570 sequences; 31,958,638 total letters
Query= NC_007921.1
Length=147544
Score E
Sequences producing significant alignments: (Bits) Value
seq176 172 5e-38
seq110 134 1e-26
seq526 107 2e-18
seq221 105 6e-18
>seq176
Length=431326
Score = 172 bits (190), Expect = 5e-38
Identities = 916/1443 (63%), Gaps = 29/1443 (2%)
Strand=Plus/Plus
Query 145058 TTGACGACCTGAAACTCGCCGGCCAACACACGACGCAAATACACGTTAGACGTGAAGGGT 145117
||||||||||| |||||||| |||||||||||||| | || | ||| ||| | ||
Sbjct 234189 TTGACGACCTGGAACTCGCCAGCCAACACACGACGAGAGTAAATGTTGCTTGTGTATGGC 234248
Query 145118 TCAAAAGACTCGTTATTGCCCAGGATTTGAGCGGTCGTTGCGGTGGGCATGTACGCCACC 145177
|| || |||||||| ||||| ||| || | ||||| || || ||||| ||| ||
Sbjct 234249 TCGAAGCACTCGTTAAAGCCCATGATCTGCGAGGTCGAGGCTGTTGGCATCGGCGCAACG 234308
Query 145178 AATAATGAATTGCGCAGGCCGTGCTTCTTGATGTCTTCCTTTAGCGTACCCCAATCCCAT 145237
| | || ||||||| ||||||| ||| | |||| || | |||| |||||
Sbjct 234309 AGAAGCGAGTTGCGCACACCGTGCTGGGCGATCTTGCCCTTGAGTGCGGCCCAGTCCCAG 234368
Query 145238 AGCGAAGTCGGCCTCACGTCCCACATGTCGTACTGCAAAATGCCCT-CGCTGGCGGGGCT 145296
|| || || || | |||||||||||||||| | ||||| || | | ||
Sbjct 234369 AGGTCGGTAGGAGTCTTGCCCCACATGTCGTACTGGAGCTCGCCCTGCGAT-ACTGGAGA 234427
Query 145297 GCCTTGAAAGGAACTGTAACTGCCCCAAGTT-TTGGCGAGCTCGCAACTCGCCTCCAGAG 145355
|||| | | | |||| | || | || | || |||||||| ||||| ||||
Sbjct 234428 GCCTGGGTATGTCTCGTAA-GGACCGAGCTTCTCAGCAAGCTCGCATGAAGCCTCAAGAG 234486
Query 145356 CGCCGAAATAAATTGTCTCGGCAATTTGCCTGTTGAGCAGCATCGCTTCATCGCTCTCGT 145415
| | ||| || ||||| ||| || |||| ||| | | || ||| |||
Sbjct 234487 CAGCATGATAGATGGTCTCAAAAATCTGGATGTTAAGCTCCTTGGCCTCAGGCGAGTCGA 234546
Query 145416 ACGGCATGCGCAGCAGTACAAAAGCATCGGCGAGCCCCTGTATTCCCACGCCGATGGGCC 145475
| |||||||| || | || ||||| || || || | | || | || ||||| |
Sbjct 234547 ATGGCATGCGGAGAGCCAAGAAGGCATCAGCAAGACCGTTGACACCAAGACCAATGGGTC 234606
Query 145476 GATGTTTCATGTTGCTCATCCTCGCCGACTCG-ATAGGATATCGATTACGGTCGATAATT 145534
| || | ||||||| | | ||| || | | || || || ||||| |
Sbjct 234607 GGTGGCGGAAGTTGCTCTTTCGTGCC-TCTGGTACCGGGTAGTAGTTGATCTCGATGGTC 234665
Query 145535 TTATTCAAGTTTCGCACTACTACCTTTGTAATGTGCCGCAACTTTTCAAAGTCAAACCGA 145594
|| |||| ||| || || || || || | | | | || | |||||||| |
Sbjct 234666 TTGTTCAGGTTACGTGTGACCACTTTGGTGACCTCGTGAAGTTTCTTGAAGTCAAA---A 234722
Query 145595 GCCTCG---TCAACGACCACACAGCTATTGACGGCGATCGACGCCAAATTACAAACTGCC 145651
||||| || | | | || || | | || | ||| |||| ||| || || ||
Sbjct 234723 ACCTCGTTCTCGATGTCGACGTAGGTGGGCAGAGCAAGCGAAGCCAGATTGCAGACAGCG 234782
Query 145652 GTCTCCTCGGCGTCGCTGTATTGTACGATCTCGGCGCACAAATTGCTACATTTGATGGTT 145711
||| || | | ||| | | |||||| | ||||||||| | ||||||||
Sbjct 234783 ACCTCATCCGGAGCAGAGTACTCCATGATCTCAGTGCACAAATTAGAGCTCTTGATGGTG 234842
Query 145712 CCCAGATTTTGCTGATTACTTTTCCTGTTGCACGCGTCCTTGTAGAGCATGTACGGTCCG 145771
|| ||||| | ||| || || || | |||| ||||||||||| || ||| | ||| |
Sbjct 234843 CCAAGATTCTTCTGGTTGCTCTTGCGGTTGGCGGCGTCCTTGTACAGAATGAAAGGTGTG 234902
Query 145772 CCAGTCTCCACCTGCGTCTCCACGATA--AAACGGTGCAAGTCCTGCGCACGCACCTGCT 145829
|| ||||| ||||| ||| | ||| | || | | | ||| ||||| ||| ||
Sbjct 234903 CCGGTCTCGGTCTGCGCCTCGAGAATAGCATACCAT--ATTTTCTGAGCACGAACCGTCT 234960
Query 145830 GCTGGTAGCGGCCCTCTTCTTCGTATTTCCTGTAGAGCTCCTCAAACGCGGAACCGTAGC 145889
|| ||| ||| || || | ||| ||||||| ||| || |||||||
Sbjct 234961 CACGGCCCTTGCCTTCTCTCTCATAACGCTCGTACAGCTCCTTGAACTCGTCACCGTAGA 235020
Query 145890 AATCGGACAGGCCGGGACACTTGTTGGGACACATCAGCGACCATACGCCGTTGGCGTTGA 145949
||| ||||| || || || | |||||| ||||| || | ||| |||||| | ||
Sbjct 235021 CATCCGACAGACCAGGGCATTCGTTGGGGCACATTAGAGTCCAAGTGCCGTTCTGTTCGA 235080
Query 145950 CGCGCTCCATAAACAAATCTGGCACCCACAGCGCGTACATCAAGTCGCGCGCTTTGCAAT 146009
| |||| |||||| | ||| || | ||| || ||||| | ||| |||||||| | | |
Sbjct 235081 CACGCTGCATAAAGAGATCGGGAATCCAGAGAGCGTAGAACAAATCGCGCGC-ACGAACT 235139
Query 146010 CCTCAGCACCCATGTTTCGCTTCAAATT--AAGCACACTATAGATGTCCGCGTGCCACGG 146067
|| ||||| ||| || | | | || || || ||| |||||||||||
Sbjct 235140 TCTTCCTTTCCATGGTTCTTGCGAAGGTCCATGAACTGCAT-GACGTCTGCGTGCCACGG 235198
Query 146068 TTCAATATAGACGGCGAGGGCTCCTTTTCG---TTTGCCACCCTGGTCCACGTGACGTAC 146124
|||| |||| ||| | || ||| || |||||||||||||| |||| |||| |
Sbjct 235199 CTCAAGGTAGATGGCAAAAGCACCTGGACGCTTGTTGCCACCCTGGTCAACGTAACGTGC 235258
Query 146125 CATGTTGTTAAAGACGCGCACCATGGGCTCGACGCCGCTGGCTACGCCGTTCGTAGAGTT 146184
||||||| |||| || | ||| || | | ||| ||| | |||||| || |
Sbjct 235259 AGTGTTGTTGTAGACTCGTAGCATTGGTACAAGACCGTTGGATGTGCCGTTTGTGCCGCC 235318
Query 146185 TATTCTGGTGCCGCGGGAGCGCACGCAATGAACATTCACGCCGAGACCGCCGCCGTACTT 146244
|| | ||| || | | | ||||||| | || | |||||| ||| |||
Sbjct 235319 AATGTATGAGCCTGTGGCCCTGATGTTGTGAACATGAAGACCAATACCGCCAGCGTTCTT 235378
Query 146245 GGATATAGCGGCGCAGTCGCCGAGCGTCTCGTAGATGCCGTCAATGCTATC--GCTTCGA 146302
||| || ||| || ||| || |||||||| || |||||||| || ||||
Sbjct 235379 GGAGATCATGGCACATATCTTGAGGGTATCGTAGATACCATCAATGCTGTCATCCTTC-- 235436
Query 146303 ATGCCGAGCAGAAAGCACGAGCACATCTGCGCCATCGGCGTCCCCGCCGAGAACAACGTC 146362
||| | | || ||||| || | ||||||| || || || || ||| | ||
Sbjct 235437 ATGGCCACCAAGAAGCAGGATGCTAGCTGCGCCTGTGGGGTACCAGCACTGAAAAGTGTT 235496
Query 146363 GGGCTCGCGTGCGTAAACATTTTTCGGC-TCATCATCCGATACGTTTCGATAGCGTCTTG 146421
|| || || || || | ||| | ||| ||| || ||||| || |||
Sbjct 235497 GGCGAAGCATGTGTGAA-GTACTTCAACGACATGTAGTTATATGTCTCGATCGCTGCTTC 235555
Query 146422 AATGTCGTCGCCATGAATGCCCAAAGCGACGCGCATGAGCATGTGTTGGGGCCGCTCCGC 146481
|||||| || || |||||||| | ||| || ||||||| ||| ||||| || | ||| ||
Sbjct 235556 AATGTCTTCCCCGTGAATGCCGACAGCCACACGCATGATCATCTGTTGCGGTCTCTCGGC 235615
Query 146482 CAC 146484
||
Sbjct 235616 AAC 235618
>seq110
Length=1833661
Score = 134 bits (148), Expect = 1e-26
Identities = 166/227 (73%), Gaps = 0/227 (0%)
Strand=Plus/Minus
Query 131008 CCACCGCGCAAACGCAGCACTAAATGTATGGTCGACTCCTTTTGAATGTTGTAATCGCTC 131067
||||| || | ||| ||||| || || | ||||| || || || |||||||| ||| |
Sbjct 1246263 CCACCACGGAGACGAAGCACCAAGTGGAGAGTCGATTCTTTCTGGATGTTGTAGTCGGAC 1246204
Query 131068 ATGGTGCGCGAGTCCTCTAGCTGCTTGCCTGCGTAGATTAAACGCTGCTGGTCCGGAGGG 131127
| || || ||||| |||||||||||||| | || | ||||||||||| || |||
Sbjct 1246203 AGAGTACGACCATCCTCGAGCTGCTTGCCTGCAAAAATCAGGCGCTGCTGGTCAGGTGGG 1246144
Query 131128 ATTCCTTCTTTGTCGGTGATTTTCTGCTTGAGCTGCTCCACAGTATCGGTGGACTCGATG 131187
|| || || ||||| ||| ||| ||||| | || | || ||| |||||||||
Sbjct 1246143 ATACCCTCCTTGTCCTGGATCTTCGACTTGACATTGTCGATGGTGTCGCTGGACTCGACC 1246084
Query 131188 TCGACGGTAACGGTTTTACCGGTTAGAGTTTTTACGAAAATCTGCAT 131234
|||| ||| | ||| || ||||| ||||| || ||||| ||||||||
Sbjct 1246083 TCGAGGGTGATGGTCTTGCCGGTGAGAGTCTTGACGAAGATCTGCAT 1246037
Score = 123 bits (136), Expect = 2e-23
Identities = 164/228 (72%), Gaps = 0/228 (0%)
Strand=Plus/Minus
Query 131007 GCCACCGCGCAAACGCAGCACTAAATGTATGGTCGACTCCTTTTGAATGTTGTAATCGCT 131066
||| || || | ||||||||| || || | ||| |||||||| || |||||||| ||
Sbjct 1246492 GCCTCCACGGAGACGCAGCACCAAGTGCAGGGTGGACTCCTTCTGGATGTTGTAGTCCGA 1246433
Query 131067 CATGGTGCGCGAGTCCTCTAGCTGCTTGCCTGCGTAGATTAAACGCTGCTGGTCCGGAGG 131126
| || || |||||| ||||||||||| ||| |||| | ||||||||||||||| ||
Sbjct 1246432 AAGTGTCCGGCCGTCCTCAAGCTGCTTGCCGGCGAAGATGAGACGCTGCTGGTCCGGTGG 1246373
Query 131127 GATTCCTTCTTTGTCGGTGATTTTCTGCTTGAGCTGCTCCACAGTATCGGTGGACTCGAT 131186
||| || || ||||| ||| || ||||| | || | || |||| || || |
Sbjct 1246372 GATGCCCTCCTTGTCTTGGATCTTTGACTTGACGTTGTCGATCGTGTCGGATGATTCCAC 1246313
Query 131187 GTCGACGGTAACGGTTTTACCGGTTAGAGTTTTTACGAAAATCTGCAT 131234
|||| || | || || ||||| || || || |||||||| |||||
Sbjct 1246312 TTCGAGTGTGATAGTCTTGCCGGTGAGTGTCTTGACGAAAATTTGCAT 1246265
>seq526
Length=1022908
Score = 107 bits (118), Expect = 2e-18
Identities = 134/184 (73%), Gaps = 0/184 (0%)
Strand=Plus/Plus
Query 131042 ACTCCTTTTGAATGTTGTAATCGCTCATGGTGCGCGAGTCCTCTAGCTGCTTGCCTGCGT 131101
|| |||| || |||||||| ||| | |||||| ||||| | |||||| || |||
Sbjct 770766 ACACCTTCTGGATGTTGTAGTCGGAGAGGGTGCGACCATCCTCCAACTGCTTTCCAGCGA 770825
Query 131102 AGATTAAACGCTGCTGGTCCGGAGGGATTCCTTCTTTGTCGGTGATTTTCTGCTTGAGCT 131161
|||| ||||||||||||||||| |||||||| || ||||| ||| || ||||| |
Sbjct 770826 AGATCAAACGCTGCTGGTCCGGTGGGATTCCCTCCTTGTCCTGGATCTTGCTCTTGACAT 770885
Query 131162 GCTCCACAGTATCGGTGGACTCGATGTCGACGGTAACGGTTTTACCGGTTAGAGTTTTTA 131221
|| | || ||| | ||||||| |||| || | ||| || || || || || ||||
Sbjct 770886 TGTCGATGGTGTCGCTCGACTCGACCTCGAGCGTGATGGTCTTGCCAGTGAGGGTCTTTA 770945
Query 131222 CGAA 131225
||||
Sbjct 770946 CGAA 770949
>seq221
Length=1251372
Score = 105 bits (116), Expect = 6e-18
Identities = 106/138 (77%), Gaps = 0/138 (0%)
Strand=Plus/Plus
Query 131008 CCACCGCGCAAACGCAGCACTAAATGTATGGTCGACTCCTTTTGAATGTTGTAATCGCTC 131067
||||| |||| ||| || || | || | ||| |||||| ||||||||||| |||
Sbjct 1048850 CCACCACGCAGACGGAGGACGAGGTGGAGGGTGCTCTCCTTCTGAATGTTGTAGTCGGAG 1048909
Query 131068 ATGGTGCGCGAGTCCTCTAGCTGCTTGCCTGCGTAGATTAAACGCTGCTGGTCCGGAGGG 131127
| |||||| ||||| ||||||||||| ||| |||| || |||||||||||||| ||
Sbjct 1048910 AGGGTGCGGCCATCCTCGAGCTGCTTGCCGGCGAAGATCAAGCGCTGCTGGTCCGGTGGA 1048969
Query 131128 ATTCCTTCTTTGTCGGTG 131145
||||| || ||||| |||
Sbjct 1048970 ATTCCCTCCTTGTCTGTG 1048987
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 472009436908800
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |