Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Dothistroma_20septosporum_20[genbank_20GCA_5F002236545.1_202017-07- 28] 570 sequences; 31,958,638 total letters Query= NC_008168.1 Length=104710 Score E Sequences producing significant alignments: (Bits) Value seq154 140 2e-28 seq254 125 5e-24 >seq154 Length=445707 Score = 140 bits (154), Expect = 2e-28 Identities = 88/95 (93%), Gaps = 5/95 (5%) Strand=Plus/Plus Query 25902 AAGCCCGTTCCCTTGGCTGTGGTTTCGCTAGATAGTAGATAGGG-----GGTAATCTCGT 25956 |||||||||||||||||||||||||||||||||||||||||||| || |||||||| Sbjct 3040 AAGCCCGTTCCCTTGGCTGTGGTTTCGCTAGATAGTAGATAGGGACAGTGGGAATCTCGT 3099 Query 25957 TAATCCTTTCATGCGCGTCACTAATTAGATGACGA 25991 |||||| |||||||||||||||||||||||||||| Sbjct 3100 TAATCCATTCATGCGCGTCACTAATTAGATGACGA 3134 >seq254 Length=360317 Score = 125 bits (138), Expect = 5e-24 Identities = 198/284 (70%), Gaps = 0/284 (0%) Strand=Plus/Minus Query 6201 TTCTACCGCTACAAAATGCCGCGCATCTGCGCCAAGGTCGAGGGTAAGGGAAACGGTATT 6260 |||||||||||||| ||| ||||||| ||||||| ||||| ||||| |||||||| Sbjct 93993 TTCTACCGCTACAAGATGGAGCGCATCCAGTCCAAGGTAGAGGGGAAGGGCAACGGTATC 93934 Query 6261 AAAACCGTCATTGTCAACATGCCTGAAGTCGCTAAGGCGCTCGGACGCCCTGCCACCTAC 6320 || || ||| | ||||| || | | ||||| | ||||| ||||| | | ||| Sbjct 93933 AAGACTGTCGTCGTCAATCTGGCCAACGTCGCCTACCAGCTCGCTCGCCCGCCAAGCTAT 93874 Query 6321 CCGACGAAATATTTCGGGTGCGAACTTGGCGCTCAGACGCAGTTTGATCACAAAAACGAG 6380 | || || || || | ||| || ||||| ||||| | |||| | ||| |||| Sbjct 93873 GTCATCAAGTACTTTGGTTTCGAGCTCGGCGCCCAGACCAATATTGACCCCAAGGACGAC 93814 Query 6381 CGCTTCATCGTTAACGGATCGCATAACTCTGCCAAGCTGCAGGACTTACTTGACGGCTTT 6440 |||| ||| | ||||| | ||| | || ||||| |||| |||| || || ||||| Sbjct 93813 CGCTGGATCATCAACGGTGCACATGAGGCTACCAAGTTGCAAGACTACCTCGATGGCTTC 93754 Query 6441 ATTCGCAAGTTTGTGCTGTGTCGGGAATGCGATAACCCGGAGAC 6484 || |||||| || || || ||| ||| | ||||| ||||| Sbjct 93753 ATCAACAAGTTCGTCCTCTGCAAGGACTGCAAGAACCCCGAGAC 93710 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 334944873163670