Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Dothistroma_20septosporum_20[genbank_20GCA_5F002236545.1_202017-07- 28] 570 sequences; 31,958,638 total letters Query= NC_008291.1 Length=198050 Score E Sequences producing significant alignments: (Bits) Value seq176 140 4e-28 >seq176 Length=431326 Score = 140 bits (154), Expect = 4e-28 Identities = 627/981 (64%), Gaps = 32/981 (3%) Strand=Plus/Plus Query 62747 GCAACAGATGCCAGATTACAAACGGCTACCTCATTAGCATCCGCATATTGTATTATCTCA 62806 |||| || |||||||| || || || ||||||| | | | | || | || |||||| Sbjct 234756 GCAAGCGAAGCCAGATTGCAGACAGCGACCTCATCCGGAGCAGAGTACTCCATGATCTCA 234815 Query 62807 GTGCAAAGATTACTACACTTGATGGTTCCTAAATTTTGTTGATTACTCTTTTTGTTACAC 62866 ||||| | |||| | ||||||||| || | ||| | || || ||||| ||| Sbjct 234816 GTGCACAAATTAGAGCTCTTGATGGTGCCAAGATTCTTCTGGTTGCTCTTGCGGTTGGCG 234875 Query 62867 GCATCCTTATAAAGAATGAATGGAGTACCAGTTTCAATCTGAGATTCTATAATCGCTTTC 62926 || ||||| || |||||||| || || || || || |||| | || | ||| || | | Sbjct 234876 GCGTCCTTGTACAGAATGAAAGGTGTGCCGGTCTCGGTCTGCGCCTCGAGAATAGCATAC 234935 Query 62927 CAGAC-----GA-CTCGAGCCTTTATTATAGATTTGTATCTCTT---TTCTCTTTCGTAT 62977 || | || | ||| || | | | | | ||| |||||| || || Sbjct 234936 CATATTTTCTGAGCACGAACCGTC-TCACGG--------CCCTTGCCTTCTCTCTCATAA 234986 Query 62978 AGTGTATACAA-TCGTTCGAACTCGTCTCCCCAAACATTGTCCAGTCCAGGACATTCATC 63036 | |||| || || ||||||||| || | |||| ||| ||||| ||||| | Sbjct 234987 CGCTCGTACAGCTCCTT-GAACTCGTCACCGTAGACATCCGACAGACCAGGGCATTCGTT 235045 Query 63037 CGGACACATCAACGACCACTCTCCGTCATCCTTCACTCGTTTCATAAAGAGATCAGGAAT 63096 || ||||| | | ||| |||| | | || || | |||||||||||| ||||| Sbjct 235046 GGGGCACATTAGAGTCCAAGTGCCGTTCTGTTCGACACGCTGCATAAAGAGATCGGGAAT 235105 Query 63097 CCAAAGAGCTATAAATAGATCTCTGGTTCTATGTTCCTCGTTTCCTGTATTCTTTTTAAG 63156 ||| ||||| || | ||| | | | | ||| || ||||| ||||| ||| Sbjct 235106 CCAGAGAGCGTAGAACAAATCGCGCGCACGAACTTCTTCCTTTCCATGGTTCTTGCGAAG 235165 Query 63157 ATCGAGGAACGCCATAATATCAGAATGCCACGGTTCCAAGTATATGGCCATAACTCCAGG 63216 || | |||| ||| | || | |||||||| || | ||| ||||| | | | || || Sbjct 235166 GTCCATGAACTGCATGACGTCTGCGTGCCACGGCTCAAGGTAGATGGCAAAAGCACCTGG 235225 Query 63217 CCGTTTGTTTCCTCCCTGATCTATGTATCTAGCGGTGTTATTATAAACTCTCAACATTGG 63276 || ||||| || ||||| || | ||| | || ||||| || || |||| | |||||| Sbjct 235226 ACGCTTGTTGCCACCCTGGTCAACGTAACGTGCAGTGTTGTTGTAGACTCGTAGCATTGG 235285 Query 63277 AATAATACCATTGGATGTACCATTGGTCCCTGAGATATAGCTTCCACTGGCACGAATATT 63336 | || ||| |||||||| || || || || || || || |||| | || || Sbjct 235286 TACAAGACCGTTGGATGTGCCGTTTGTGCCGCCAATGTATGAGCCTGTGGCCCTGATGTT 235345 Query 63337 ACTAA-TTGATAGACCTATTCCCCCTGCCATTTTAGAGATTAATGCGCATCGTTTTAACG 63395 || ||| ||||| || || || || | || ||||| | || ||| || | | Sbjct 235346 GTGAACATGA-AGACCAATACCGCCAGCGTTCTTGGAGATCATGGCACATATCTTGAGGG 235404 Query 63396 TATCATAGATGCCCTCTATACTATCATCCATCATGTTAAGTAGAAAACAGCTAGACATTT 63455 |||| ||||| || || || || |||||| ||||| | | || ||| || | Sbjct 235405 TATCGTAGATACCATCAATGCTGTCATCCTTCATGGCCACCAAGAAGCAG---GATGCTA 235461 Query 63456 GGTGACGACT----AGTTCCCGCATTAAATAAGGTAGGAGAAGCGTGAGTAAACCATTTT 63511 | || || || || || ||| | || | || || ||||| || || || | || Sbjct 235462 GCTG-CGCCTGTGGGGTACCAGCACTGAAAAGTGTTGGCGAAGCATGTGTGAAGTACTTC 235520 Query 63512 TCAGA-AAGTAGATTGTACGTCTCAATAGCTGAGTCTATATCCCATTGATGAATTCCTAC 63570 || | |||| || || ||||| || |||| || || || ||||| || || Sbjct 235521 AACGACATGTAG-TTATATGTCTCGATCGCTGCTTCAATGTCTTCCCCGTGAATGCCGAC 235579 Query 63571 TGCGACACGCATTAACATGTGCTGAGGTCTTTCAACGATCTTGTTGTTTATTTTCAACAA 63630 || |||||||| | ||| || || ||||| || | | |||| | ||| | | | Sbjct 235580 AGCCACACGCATGATCATCTGTTGCGGTCTCTCGGCAACCTTGCCATCAATTCTGAGAAG 235639 Query 63631 GTAGGATTTTTCCAAAGTTTTAAAACCAAAATAGTTGTATGAAAAGTCTCGTTCGTAAAT 63690 ||| ||| |||| ||| || || || || || | ||| ||||| || || || | Sbjct 235640 GTATGATCGCTCCAGAGTCTTGAAGCCGAAGTATTGGTAGTTGAAGTCGCGGTCATAGAC 235699 Query 63691 AATAACCGAGTTGAGTTTATC 63711 ||| ||||||| || | ||| Sbjct 235700 AATGGCCGAGTTCAGCTCATC 235720 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 633627485372000