Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Dothistroma_20septosporum_20[genbank_20GCA_5F002236545.1_202017-07-
28] 570 sequences; 31,958,638 total letters
Query= NC_008603.1
Length=321240
Score E
Sequences producing significant alignments: (Bits) Value
seq526 116 8e-21
seq443 98.7 2e-15
>seq526
Length=1022908
Score = 116 bits (128), Expect = 8e-21
Identities = 161/223 (72%), Gaps = 2/223 (1%)
Strand=Plus/Minus
Query 279345 GGTGAGGATCTGTGTGACTGTGATTTCTCGCTCGCATATGGTGGGAAGATTCTGCTAAAC 279404
|||||||| || || |||| ||| | |||||||||| ||||| ||||| |||
Sbjct 545002 GGTGAGGACCTCTGCAACTGCACATTCAACTTGGCATATGGTGCAAAGATCCTGCTCAAC 544943
Query 279405 TCTACCCGCCTCAACATCAAGCGTGGCAACCGGTATGGTCTCATCGGTCCCAATGGAGCG 279464
|| | ||| | |||||||||| | || |||||||| |||||||||| ||| |
Sbjct 544942 CAGACACATCTCCGCCTCAAGCGTGGTCAGCGTTATGGTCTTCTCGGTCCCAACGGATCT 544883
Query 279465 GGTAAGAGCACTCTAATGCGCGCCATTGCAAACGGTCAGCTGGAAGGATTTCCTAACGCA 279524
|| |||| ||| || ||||||||||| |||| ||| | || ||||| ||||| |||
Sbjct 544882 GGCAAGACCACGCTCATGCGCGCCATCAACAACGAGCAGGTCGAGGGATTCCCTAA-GCA 544824
Query 279525 -TCTGAGGTAAGGACAGTGTATGTAGAGCACGACATCGACTCC 279566
||||| | ||| ||||| || ||||||||| | || |||
Sbjct 544823 GGACGAGGTTAAGACCGTGTACGTCGAGCACGACTTGGATTCC 544781
Score = 98.7 bits (108), Expect = 2e-15
Identities = 164/232 (71%), Gaps = 4/232 (2%)
Strand=Plus/Minus
Query 280161 TCACGGATTGGTGTCATTGGACCCAATGGTGCGGGTAAGTCTACCCTAATCAAAGTCCTG 280220
|| || |||| |||||||| || |||||||| || |||||||| || |||| |||||
Sbjct 544186 TCTCGTATTGCCGTCATTGGGCCAAATGGTGCCGGCAAGTCTACTCTCGTCAACGTCCTA 544127
Query 280221 ACTGGCGAGACCCAGGCC-ACTGAGGGGTCCGTTTGGAAGCATCCCAACATGCGGATGGC 280279
||||| ||| | || || |||| || ||| | |||| ||||| || || ||
Sbjct 544126 ACTGGTGAG-CTCATCCCGACTGCCGGCGACGTCTACCAGCACGAGAACATCCGTATCGC 544068
Query 280280 TTACGTCGCTCAGCACGCTTTCCACCACATCGAGAACCACCTGGACATGACTCCTAACCA 280339
||| || |||||||||||| |||||||| |||| || || | ||| || | |
Sbjct 544067 CTACATCAAGCAGCACGCTTTCGCGCACATCGACCACCATCTCGAGAAGACCCCGTCCGA 544008
Query 280340 ATACATTCAGTGGCGCTATGCA-AGTGGGCAGGATCTGGAGTCGGTGGATCG 280390
|||||| |||||||| | | || | ||| |||||| ||| | |||| ||
Sbjct 544007 ATACATCCAGTGGCGGT-TCCAGACTGGTGAGGATCGTGAGACCATGGACCG 543957
Score = 96.9 bits (106), Expect = 7e-15
Identities = 123/167 (74%), Gaps = 2/167 (1%)
Strand=Plus/Minus
Query 280672 CCAAGCTGGGTCTGGACCCCGAGTTTACAACTCACTCTCGCATTCGCGGTCTTTCTGGAG 280731
|||| | ||||||||| | ||| | ||||||| ||||| |||||||| || |
Sbjct 543630 CCAACTTCGGTCTGGACGCTGAGCTCGTGTCTCACTCCCGCATGAAGGGTCTTTCCGGCG 543571
Query 280732 GCCAGAAGGTCAAACTTGTCATCGGAGCA-GCTCTGTGGCAACACCCTCACGTGATCGTT 280790
| ||| ||||| | || ||| ||| |||| |||||| | |||||| ||||||||
Sbjct 543570 GTCAGCGTGTCAAGGTCGTGCTCGCCGCATGCTC-GTGGCAGCGTCCTCACTTGATCGTT 543512
Query 280791 CTCGACGAGCCTACCAACTATCTGGACCGCGAGAGCCTGGGCGCTCT 280837
|| |||||||| ||||||||||| ||||| || ||||| |||||
Sbjct 543511 CTTGACGAGCCAACCAACTATCTCGACCGTGACTCACTGGGTGCTCT 543465
>seq443
Length=1095707
Score = 98.7 bits (108), Expect = 2e-15
Identities = 134/187 (72%), Gaps = 0/187 (0%)
Strand=Plus/Plus
Query 280174 TCATTGGACCCAATGGTGCGGGTAAGTCTACCCTAATCAAAGTCCTGACTGGCGAGACCC 280233
||||||| ||||||||||| || ||||| || | ||||| ||| ||||||||||| |
Sbjct 334713 TCATTGGGCCCAATGGTGCTGGCAAGTCGACGTTGATCAAGGTCTTGACTGGCGAGGTCA 334772
Query 280234 AGGCCACTGAGGGGTCCGTTTGGAAGCATCCCAACATGCGGATGGCTTACGTCGCTCAGC 280293
|| || || || ||| ||||||||| |||| || | ||| || ||||
Sbjct 334773 TTCCCCAAGAAGGCAAGGTCGAGAAACATCCCAACTTGCGAATTGGCTACATCAAGCAGC 334832
Query 280294 ACGCTTTCCACCACATCGAGAACCACCTGGACATGACTCCTAACCAATACATTCAGTGGC 280353
|||| || | ||| | |||| || || || | ||| || ||||| ||| |||||||||
Sbjct 334833 ACGCGCTCGAGCACGTGGAGATGCATCTCGAAAAGACGCCCAACCAGTACCTTCAGTGGC 334892
Query 280354 GCTATGC 280360
| |||||
Sbjct 334893 GATATGC 334899
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 1027829293579370
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |