Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Dothistroma_20septosporum_20[genbank_20GCA_5F002236545.1_202017-07-
28] 570 sequences; 31,958,638 total letters
Query= NC_008724.1
Length=288047
Score E
Sequences producing significant alignments: (Bits) Value
seq110 197 3e-45
seq559 138 2e-27
seq526 125 1e-23
seq121 84.2 4e-11
>seq110
Length=1833661
Score = 197 bits (218), Expect = 3e-45
Identities = 180/227 (79%), Gaps = 0/227 (0%)
Strand=Plus/Minus
Query 68235 CCTCCGCGAAGGCGCAATACCAAGTGTAGCGTGGACTCTTTTTGGATGTTATAATCGGAG 68294
||||| || || |||| |||||||| || |||||||| || |||||||| || || ||
Sbjct 1246491 CCTCCACGGAGACGCAGCACCAAGTGCAGGGTGGACTCCTTCTGGATGTTGTAGTCCGAA 1246432
Query 68295 AGTGTCCTCCCATCTTCTAACTGCTTCCCGGCGAATATGAGTCTTTGTTGGTCGGGTGGA 68354
||||||| || || || | |||||| |||||||| ||||| | || ||||| |||||
Sbjct 1246431 AGTGTCCGGCCGTCCTCAAGCTGCTTGCCGGCGAAGATGAGACGCTGCTGGTCCGGTGGG 1246372
Query 68355 ATGCCTTCCTTGTCTTGAATCTTTGCCTTGACGGCCTCGATGGTGTCTGCTGATTCTACT 68414
||||| ||||||||||| ||||||| ||||||| ||||| ||||| | |||||| |||
Sbjct 1246371 ATGCCCTCCTTGTCTTGGATCTTTGACTTGACGTTGTCGATCGTGTCGGATGATTCCACT 1246312
Query 68415 TCCAAGGTGATGGTTTTTCCCGTGAGGGTCTTGACGAATATCTGCAT 68461
|| | ||||| || || || ||||| ||||||||||| || |||||
Sbjct 1246311 TCGAGTGTGATAGTCTTGCCGGTGAGTGTCTTGACGAAAATTTGCAT 1246265
Score = 156 bits (172), Expect = 8e-33
Identities = 173/228 (76%), Gaps = 2/228 (1%)
Strand=Plus/Minus
Query 68235 CCTCCGCGAAGGCGCAATACCAAGTGTAGCGTGGACTCTTTTTGGATGTTATAATCGGAG 68294
|| || || || || | |||||||| || || || ||||| |||||||| || |||||
Sbjct 1246263 CCACCACGGAGACGAAGCACCAAGTGGAGAGTCGATTCTTTCTGGATGTTGTAGTCGGAC 1246204
Query 68295 AGTGTCCTCCCATCTTCTAACTGCTTCCCGGCGAATATGAGTCTTTGTTGGTCGGGTGGA 68354
|| || | ||||| || | |||||| || || || || || | || ||||| |||||
Sbjct 1246203 AGAGTACGACCATCCTCGAGCTGCTTGCCTGCAAAAATCAGGCGCTGCTGGTCAGGTGGG 1246144
Query 68355 ATGCCTTCCTTGTCTTGAATCTTTGCCTTGACGGCCTCGATGGTGTCTGCTG-ATTCTAC 68413
|| || |||||||| || ||||| | |||||| ||||||||||| |||| | || ||
Sbjct 1246143 ATACCCTCCTTGTCCTGGATCTTCGACTTGACATTGTCGATGGTGTC-GCTGGACTCGAC 1246085
Query 68414 TTCCAAGGTGATGGTTTTTCCCGTGAGGGTCTTGACGAATATCTGCAT 68461
|| | ||||||||| || || ||||| ||||||||||| ||||||||
Sbjct 1246084 CTCGAGGGTGATGGTCTTGCCGGTGAGAGTCTTGACGAAGATCTGCAT 1246037
Score = 104 bits (114), Expect = 4e-17
Identities = 146/205 (71%), Gaps = 0/205 (0%)
Strand=Plus/Minus
Query 68235 CCTCCGCGAAGGCGCAATACCAAGTGTAGCGTGGACTCTTTTTGGATGTTATAATCGGAG 68294
|| || ||||| || | || | || || ||| ||| || |||||||| || |||||
Sbjct 1246035 CCACCACGAAGACGGAGGACGAGATGGAGAGTGCTCTCCTTCTGGATGTTGTAGTCGGAC 1245976
Query 68295 AGTGTCCTCCCATCTTCTAACTGCTTCCCGGCGAATATGAGTCTTTGTTGGTCGGGTGGA 68354
|| || | || || || | ||| || || || || || | | ||| ||||| ||||||
Sbjct 1245975 AGGGTGCGACCGTCCTCGAGCTGTTTGCCTGCAAAAATCAAGCGTTGCTGGTCAGGTGGA 1245916
Query 68355 ATGCCTTCCTTGTCTTGAATCTTTGCCTTGACGGCCTCGATGGTGTCTGCTGATTCTACT 68414
|||||||||||||| || ||||| ||| || ||||||||||| | || || ||
Sbjct 1245915 ATGCCTTCCTTGTCCTGGATCTTGCTCTTCACATTGTCGATGGTGTCGGACGACTCAACC 1245856
Query 68415 TCCAAGGTGATGGTTTTTCCCGTGA 68439
|| | ||| ||||| || || ||||
Sbjct 1245855 TCGAGGGTAATGGTCTTGCCGGTGA 1245831
>seq559
Length=875383
Score = 138 bits (152), Expect = 2e-27
Identities = 299/441 (68%), Gaps = 10/441 (2%)
Strand=Plus/Minus
Query 9935 CATGACGCCCGCCTTCTGGTACTCCGATACCCGGCGCTCGAAGAAGTTGGACTTGCCCTC 9994
|||||| || ||||||||||| || || || |||||||||||||| |||||| |
Sbjct 604996 CATGACACCAGCCTTCTGGTATTCGCCAACACGCTTCTCGAAGAAGTTGGTCTTGCCGCC 604937
Query 9995 GAGGGAAATGAGCTCCATGAAGTCAAAGGGGTTCTCGGC---GCCAAACTGCTTGGGGTA 10051
|| |||||| |||||||||||| |||||||| ||| | |||| ||| ||
Sbjct 604936 CAGCGAAATGTTCTCCATGAAGTCGAAGGGGTTGGTGGCGTTGTAGAACTTCTT---GTT 604880
Query 10052 ACCGAGTGCTGTGAAAATGCGGTCAGCCACGAACTCGATGTACTGGCTCATCAGGTCCGA 10111
|||||||| | | ||| || || ||||| || ||||| || ||| ||| | |
Sbjct 604879 GCCGAGTGCCAACAGTAGGCGATCGGCGACGAATTCAATGTATTGTGACATGAGGCCAGC 604820
Query 10112 GTTCATGCCAATCATGCGGCAGGGGATGGCGTCGCAAATGAAGTCCTTTTCGTTGGCGAC 10171
|||||| || | | ||| || | ||||| | ||| |||| ||| | | |||
Sbjct 604819 GTTCATCCCCAGAAGCTTGCATGGAAGAGCGTCTGTCAAGAACTCCTGCTCGATCGTGAC 604760
Query 10172 CGCTTCCTCGACGATGCTCTTTACCACGTCAAGGGACAGCTTGTTCTCGAGCTTCGAATA 10231
|| || || |||||||| || | | | || | ||||||||| || | ||| |
Sbjct 604759 GGCCTCGGTGATGATGCTCTGCACAAGGGCCTGGTTCGGCTTGTTCTTCAGATGCGAGAA 604700
Query 10232 CAGGAGCTCTCCAAACTGCTG-GTGGAGGCCCTCGTCGCGGCTGATGAACTCGTTGGACA 10290
||| || | || | ||| ||| | |||||| || ||| ||||| |||||| || |
Sbjct 604699 CAGAAGGCAGGCGAAGT-CTGTGTGCATGCCCTCATCACGGGAGATGAGCTCGTTCGAGA 604641
Query 10291 AACCCAGACCGGGCATGAGCCCCCGGTTGCGCAGCCAGAAAATGGC-GCAGAACGACCCG 10349
| || |||| |||||| || || || ||||||||| || || ||| || || ||
Sbjct 604640 ATGTGAGCCCGGCCATGAGACCACGTTTCTTCAGCCAGAAGATAGCAGCA-AAAGATCCA 604582
Query 10350 GAGAACAGAAGACCCTCCACG 10370
||||| | | |||||| |||
Sbjct 604581 GAGAAGAAGATACCCTCAACG 604561
>seq526
Length=1022908
Score = 125 bits (138), Expect = 1e-23
Identities = 142/188 (76%), Gaps = 2/188 (1%)
Strand=Plus/Plus
Query 68266 TGGACTCTTTTTGGATGTTATAATCGGAGAGTGTCCTCCCATCTTCTAACTGCTTCCCGG 68325
|| || | || |||||||| || |||||||| || | ||||| || |||||||| || |
Sbjct 770763 TGCACACCTTCTGGATGTTGTAGTCGGAGAGGGTGCGACCATCCTCCAACTGCTTTCCAG 770822
Query 68326 CGAATATGAGTCTTTGTTGGTCGGGTGGAATGCCTTCCTTGTCTTGAATCTTTGCCTTGA 68385
|||| || | | || ||||| ||||| || || |||||||| || ||||| |||||
Sbjct 770823 CGAAGATCAAACGCTGCTGGTCCGGTGGGATTCCCTCCTTGTCCTGGATCTTGCTCTTGA 770882
Query 68386 CGGCCTCGATGGTGTCTGCT-GATTCTACTTCCAAGGTGATGGTTTTTCCCGTGAGGGTC 68444
| ||||||||||| ||| || || || || | |||||||| || || |||||||||
Sbjct 770883 CATTGTCGATGGTGTC-GCTCGACTCGACCTCGAGCGTGATGGTCTTGCCAGTGAGGGTC 770941
Query 68445 TTGACGAA 68452
|| |||||
Sbjct 770942 TTTACGAA 770949
Score = 87.8 bits (96), Expect = 3e-12
Identities = 139/197 (71%), Gaps = 2/197 (1%)
Strand=Plus/Plus
Query 224979 ACCGCCACTGGATGTACTGGTTGGGGGTCATGTCCAGGTGGTTCTCAATATGGTGGAAAG 225038
|||||||||||||||| | | |||||| | || || |||| || || || |||||
Sbjct 543991 ACCGCCACTGGATGTATTCGGACGGGGTCTTCTCGAGATGGTGGTCGATGTGCGCGAAAG 544050
Query 225039 CATGCTGGGCTACGTACGCCATGCGCATGTTGGGATGCTTCCACACAGAGCCCCGAGTC- 225097
| ||||| | ||| || || || ||||| |||| | || ||| ||||
Sbjct 544051 CGTGCTGCTTGATGTAGGCGATACGGATGTTCTCGTGCTGGTAGACGTCGCCGGCAGTCG 544110
Query 225098 GGTTGTGCCTCGCCGGTGAGGACCTTGATGAGCGTAGTCTTGCCCGCACCATTGGGGCCA 225157
|| || | ||| || || ||||| |||| ||| |||| |||||| |||||||| || |||
Sbjct 544111 GGATGAG-CTCACCAGTTAGGACGTTGACGAGAGTAGACTTGCCGGCACCATTTGGCCCA 544169
Query 225158 ATCACGCCAATCCGGGA 225174
|| ||| |||| || ||
Sbjct 544170 ATGACGGCAATACGAGA 544186
>seq121
Length=465529
Score = 84.2 bits (92), Expect = 4e-11
Identities = 131/185 (71%), Gaps = 2/185 (1%)
Strand=Plus/Minus
Query 177098 AATCTCGGCGTTGTTAGTAATACTAGAC-ACAGACGCATCACGGACATTCAGTAGCTTAC 177156
|||||||||||| || | ||| || | | | || ||||| || ||||| || | |||||
Sbjct 193707 AATCTCGGCGTTCTTTGAAAT-CTGGTCGATGGAAGCATCGCGCACATTGAGAATCTTAC 193649
Query 177157 CACGGAGGGGGAAAATTCCGTAGCGATCCCGACCCACGACAGCAAGGCCAGCTGTGGCAA 177216
|||| || || || | || | | || | || ||||| | || || ||||
Sbjct 193648 CACGAAGTGGAAAGACACCAAACAGGTCTGGGTTGACAACAGCTCGCCCTGCAAGAGCAA 193589
Query 177217 GCGTGGCGGCAGAGTCACCCTCTGTCAAAATGAGCGTGCACATTCCAGAGTGCTTCGTGC 177276
|| ||||||||||||||| |||||||| |||||||||||| | | || |||||| |
Sbjct 193588 GCAAGGCGGCAGAGTCACCTTCTGTCAAGATGAGCGTGCACTTGTGACCGTCCTTCGTAC 193529
Query 177277 CCGCC 177281
| |||
Sbjct 193528 CGGCC 193524
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 921615833440400
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |