Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Dothistroma_20septosporum_20[genbank_20GCA_5F002236545.1_202017-07-
28] 570 sequences; 31,958,638 total letters
Query= NC_009127.1
Length=295146
Score E
Sequences producing significant alignments: (Bits) Value
seq559 291 2e-73
seq176 201 2e-46
seq526 91.5 3e-13
>seq559
Length=875383
Score = 291 bits (322), Expect = 2e-73
Identities = 583/854 (68%), Gaps = 34/854 (4%)
Strand=Plus/Plus
Query 42309 ATGTACAAGAAGGCGCAGTTCTCCAACTGGACCGCCGAGGAGATTGACCTGGCCAAGGA- 42367
|||||||| ||||| || ||| |||||| || ||||||||||| ||| | |||||
Sbjct 604145 ATGTACAAAAAGGCCGAGGCCTCATTCTGGACAGCTGAGGAGATTGATCTGTCGAAGGAT 604204
Query 42368 ---CACGGCCGGCT---GGGAGTCACTGTCTGAGAACGAAAAGTTTTTCCTCAAAAACAT 42421
|||| | || | || ||| | | |||||| || ||| || | || |
Sbjct 604205 CTCCACGACTGGAACAAGCGACTCAACGACGACGAACGA----TTCTTCATCTCACACGT 604260
Query 42422 ACTGGCCTTCTTCGCCGCCTCTGACGGCATAGTCAATGAGAACCTGGCCACCAGGTTCAT 42481
|| || ||||||||||| || || ||||| ||||| |||||||| | | | ||||
Sbjct 604261 CCTCGCATTCTTCGCCGCATCCGATGGCATTGTCAACGAGAACCTCGTCGAGCGCTTCAG 604320
Query 42482 GAAAGAGGTGCAGTACTTTGAGGCGCGCTGCTTCTACGGCTTCCAGATAGCCATAGAGAA 42541
||||||||| | ||||| || |||||||||||||||||||| || |||||
Sbjct 604321 CTCTGAGGTGCAGATCCCGGAGGCACGATGCTTCTACGGCTTCCAGATCATGATGGAGAA 604380
Query 42542 CGTGCACTCTGAGGTGTACGCCAAACTGCTCAACACGTACATCCTGGATCCCGTCGAGCG 42601
| | ||||| ||| || || || || | || |||||| || || ||||
Sbjct 604381 CATCCACTCCGAGACATATTCCCTTCTCATCGATACATACATCAGCGAGCCAAAGCAGCG 604440
Query 42602 TAACGGGCTGTTCAAGGCCATGGAGACGATGCCCTGCATCAAGAAGAAGGCGGACTGGGC 42661
| |||||||| ||||| || | || || |||||| | |||||| ||||||||
Sbjct 604441 AACATACCTGTTCAATGCCATCGACAACATCCCATGCATCCGCAGGAAGGCTGACTGGGC 604500
Query 42662 GCTCAACTGGATCGAGAGTCCCGA-CGCAACGTTCGGCGAGAGGCTGGTAGCCTTTACCG 42720
| | ||||| | | || | | || |||| | | || | || ||| |||
Sbjct 604501 GTTGCGATGGATTTCT-GACAAGAACTCGACATTCGCCCTCCGTCTCATTGCATTTGCCG 604559
Query 42721 CCGTCGAGGGCATCTTCTTCTCGGGCGCCTTCGCCTCCATCTTCTGGCTCAAGCAGAA-G 42779
|||| ||||| ||||||||||| || | || || | ||||||||||| ||| | |
Sbjct 604560 CCGTTGAGGGTATCTTCTTCTCTGGATCTTTTGCTGCTATCTTCTGGCTGAAGAAACGTG 604619
Query 42780 GTGTCGATGCCCGGACTCACCTTCTCGAACGAACTCATCAGCAGGGACGAGGGGCTGCAT 42839
|| || ||| |||| ||||| ||||||||||| |||||| | | || ||||| ||||
Sbjct 604620 GTCTC-ATGGCCGGGCTCACATTCTCGAACGAGCTCATCTCCCGTGATGAGGGCATGCAC 604678
Query 42840 AGGGACTTTGCCTGCCTCCTGTTCTCGAGCCACCTCAGGCACAAGCCCTCGAAGGAGCGG 42899
| ||||| |||||||| ||||||||| || || | | ||||||| ||| |
Sbjct 604679 ACAGACTTCGCCTGCCTTCTGTTCTCG---CATCTGAAGAACAAGCCGAACCAGGCCCTT 604735
Query 42900 GTCCGGGCCATCATCACGGAGGCCGTGGAGATCGAGAAGGAGTTCCTCACGCAGTCGCTG 42959
|| | | ||||||||| |||||||| ||||||| |||||||| | || || ||||
Sbjct 604736 GTGCAGAGCATCATCACCGAGGCCGTCACGATCGAGCAGGAGTTCTTGAC--AGACGCTC 604793
Query 42960 C-CCGTGTCC-CTGGTCGGCATGAACCACGACCTCATGTGCAAGTACATCCAGTACGTCG 43017
|| || || | || |||||| | |||||||| | ||||| | | |||||
Sbjct 604794 TTCCATGCAAGCTTCTGGGGATGAACGCTGGCCTCATGTCACAATACATTGAATTCGTCG 604853
Query 43018 CCGACCATCTCCTGTGCCAGATGGGTCTCAGCCGCC------TCTACAACACGCCGTGCC 43071
|||| | || |||| ||| ||| || | |||||||| | | ||
Sbjct 604854 CCGATCGCCTACTGT------TGGCACTCGGCAACAAGAAGTTCTACAACGCCACCAACC 604907
Query 43072 CCTTCGACTTTATGGAGAACATCTCGTTGGAGGGCAAGACCAACTTTTTCGAGAAGCGCG 43131
|||||||||| ||||||||||| ||| ||| |||||||||||||| ||||||||||| |
Sbjct 604908 CCTTCGACTTCATGGAGAACATTTCGCTGGGCGGCAAGACCAACTTCTTCGAGAAGCGTG 604967
Query 43132 TCGCCGACTACCAG 43145
| | ||| ||||||
Sbjct 604968 TTGGCGAATACCAG 604981
>seq176
Length=431326
Score = 201 bits (222), Expect = 2e-46
Identities = 480/719 (67%), Gaps = 15/719 (2%)
Strand=Plus/Plus
Query 244688 GCCAGGTTGCAGACGGCCACCTCCTCCGAGTTGGTGTACTGGACAATCTCGGTGCAGAGG 244747
||||| |||||||| || ||||| |||| | ||||| | ||||| ||||| |
Sbjct 234765 GCCAGATTGCAGACAGCGACCTCATCCGGAGCAGAGTACTCCATGATCTCAGTGCACAAA 234824
Query 244748 TTACTGCACTTGATGGTGCCCAGGTGCTGGTGATTGGACTTGGCGTTGCAGGCGTCCTTG 244807
||| || |||||||||||| || | || || ||| |||| |||| ||||||||||
Sbjct 234825 TTAGAGCTCTTGATGGTGCCAAGATTCTTCTGGTTGCTCTTGCGGTTGGCGGCGTCCTTG 234884
Query 244808 TAGAGCATGAAGGGCCCCCCGGTCTCGAGCTGGGCGACGAGGACGCTGTTCCAGAGGTCC 244867
|| || ||||| || ||||||||| ||| || |||| | | ||| | | |
Sbjct 234885 TACAGAATGAAAGGTGTGCCGGTCTCGGTCTGCGCCTCGAGAATAGCATACCATATTTTC 234944
Query 244868 CTAGCCTTGACCGTCCTGCGAGCCTTGCCCTCTGCCTCGTAGCGGGTGTACAGGGCCTCG 244927
||| |||||| || ||||||| ||| ||| || || |||||| ||| |
Sbjct 234945 TGAGCACGAACCGTCTCACGGCCCTTGCCTTCTCTCTCATAACGCTCGTACAGCTCCTTG 235004
Query 244928 AACTCGGGGCCCCAGACCTCGTCTAGGCCGGGGCA--CGACGCCGGGCACATGAGACTCC 244985
|||||| || |||| || || || ||||| || | |||||||| ||| |||
Sbjct 235005 AACTCGTCACCGTAGACATCCGACAGACCAGGGCATTCGTTG--GGGCACATTAGAGTCC 235062
Query 244986 ACTCGCCGCCGTCCTTGACCCTCTGCATGAAGAGGTCGGGGATCCAGAGGGCCTGGAAGA 245045
| |||| | | ||| | |||||| ||||| ||||| |||||||| || | ||| |
Sbjct 235063 AAGTGCCGTTCTGTTCGACACGCTGCATAAAGAGATCGGGAATCCAGAGAGCGTAGAACA 235122
Query 245046 GGTCCCTGGTCCTCTGCTCGTCCGAGCCAGTGTTCTTCCTCAGCTCCAAAAAGTCAAAGA 245105
|| | | | || ||| ||| |||||| | || |||| || | | ||
Sbjct 235123 AATCGCGCGCACGAACTTCTTCCTTTCCATGGTTCTTGCGAAGGTCCATGAACTGCATGA 235182
Query 245106 CGTCGACGTGCCAGGGCTCCATGTAGACAGCGAGGGCGCCGGGCCGCTTGTTGCCTCCCT 245165
|||| ||||||| ||||| | ||||| || | || || || ||||||||||| ||||
Sbjct 235183 CGTCTGCGTGCCACGGCTCAAGGTAGATGGCAAAAGCACCTGGACGCTTGTTGCCACCCT 235242
Query 245166 GGTCCAC-CATCCTCTCGAGCGCGTTGAAGATGCGCAGGGTAGGCACTATGCCGTTAGAG 245224
|||| || | | | | | |||| ||| || || | || || | ||||| ||
Sbjct 235243 GGTCAACGTAACGTGCAGTG-TTGTTGTAGACTCGTAGCATTGGTACAAGACCGTTGGAT 235301
Query 245225 TGGCCGTTGGTGCCCTTGATGTAGGCGCCCTTGCCCCTGAGGTTGCTGATGGACATG--- 245281
|||||| ||||| ||||| | ||| || |||||| |||| || |||||
Sbjct 235302 GTGCCGTTTGTGCCGCCAATGTATGAGCCTGTGGCCCTGATGTTG----TGAACATGAAG 235357
Query 245282 -CCTAGTCCGCCGGCGTGCTTGGAGATGAGGGCGCAGCTCTTGATGGTGTCTGCTATGCC 245340
|| | ||||| |||| ||||||||| | ||| || |||||| ||| || || ||
Sbjct 235358 ACCAATACCGCCAGCGTTCTTGGAGATCATGGCACATATCTTGAGGGTATCGTAGATACC 235417
Query 245341 CTCCATGCTGTCCGACTTCATGTTGAGCAGAAAGCAGGAGGACAGCTGGGGCT-TGGGG 245398
|| |||||||| ||||||| | || |||||||| | ||||| | || |||||
Sbjct 235418 ATCAATGCTGTCATCCTTCATGGCCACCAAGAAGCAGGATGCTAGCTGCGCCTGTGGGG 235476
>seq526
Length=1022908
Score = 91.5 bits (100), Expect = 3e-13
Identities = 101/131 (77%), Gaps = 4/131 (3%)
Strand=Plus/Minus
Query 242937 GAGCTGATGAGGTTCCCGGACAGGACCACTCCGATCGGACAGATGATCAACTCGTACCTG 242996
|||| ||||| |||||||||||||| || ||||||||||||||||||| || ||
Sbjct 61854 GAGCATATGAGATTCCCGGACAGGACGACAGTGATCGGACAGATGATCAACAGCTATCT- 61796
Query 242997 CTCAACAAG-AGCG-ATCTGGACGATCACGTCGTACACCTCCTGTTCTCGGCCAACCGAT 243054
||| ||| | || | | || ||||||| | |||| || || |||||||| || ||||
Sbjct 61795 -CCAAGAAGCATCGCAACAAGAAGATCACGCCATACATCTGCTTTTCTCGGCGAATCGAT 61737
Query 243055 GGGAAGCCGCC 243065
||||||| |||
Sbjct 61736 GGGAAGCTGCC 61726
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 944332471583200
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |