Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Dothistroma_20septosporum_20[genbank_20GCA_5F002236545.1_202017-07-
28] 570 sequences; 31,958,638 total letters
Query= NC_011183.1
Length=154641
Score E
Sequences producing significant alignments: (Bits) Value
seq176 271 8e-68
>seq176
Length=431326
Score = 271 bits (300), Expect = 8e-68
Identities = 621/923 (67%), Gaps = 14/923 (2%)
Strand=Plus/Minus
Query 93715 AATTACGATTACTTTGCCTTCAAAACTCTGGAGAAGTCGTACCTCCTCAAGATGGATGGC 93774
|| ||| | ||||| | |||||| ||||||||| || ||||| |||| || ||||||
Sbjct 235681 AACTACCAATACTTCGGCTTCAAGACTCTGGAGCGATCATACCTTCTCAGAATTGATGGC 235622
Query 93775 AGGGTTTCCGAGCGACCGCACCAGCTGCTGATGCGCGTCGCCATCGGGATTCACGGCCAC 93834
| |||| ||||| ||||||| ||| || | ||||| || || |||| |||||||| |
Sbjct 235621 AAGGTTGCCGAGAGACCGCAACAGATGATCATGCGTGTGGCTGTCGGCATTCACGGGGAA 235562
Query 93835 GACAT-GCCGAATGTTTTGCGGGCTTTCAGAGACATGCGGGACAAGAGGTATAC-CATGG 93892
||||| | | | | | | | | | ||||| | ||| | || ||||
Sbjct 235561 GACATTGAAGCAGCGATCGAGACATATAACT-ACATGTCGTTGAAGTACTTCACACATG- 235504
Query 93893 CCACCCCGACCCTGTTCAACGCGGGGACCCCGGTGCCACAGATGTCTTCGTGTTTCCTGA 93952
| | || || || |||| || || ||||| | | ||| | | || || ||| ||
Sbjct 235503 CTTCGCCAACACTTTTCAGTGCTGGTACCCCACAGGCGCAGCTAGCATCCTGCTTCTTGG 235444
Query 93953 TGACGAACAAGGCCGACTCCATCTCCGGAATTTTCGACAGCCTCAAGGACTGTGCGACCA 94012
|| | | |||| ||| ||| || || | ||| | ||||||| ||||| | |
Sbjct 235443 TGGCCATGAAGGATGACAGCATTGATGGTATCTACGATACCCTCAAGATATGTGCCATGA 235384
Query 94013 TCTCAAAATACGCGGGGGGAATCGGGATCAGTGTCCACGACGTACGTGCCAGGGGTTCCT 94072
|||| || |||| || || || || | ||| ||| || | | |||| || || |
Sbjct 235383 TCTCCAAGAACGCTGGCGGTATTGGTCTTCATGTTCACAACATCAGGGCCACAGGCTCAT 235324
Query 94073 ACATCCGCGGTACCAATGGCACCTCCAACGGCCTCGTCCCTATGCTCCGGGTCTTCAACA 94132
|||| |||| || || ||||| |||||||| || || || ||||| || |||| |||||
Sbjct 235323 ACATTGGCGGCACAAACGGCACATCCAACGGTCTTGTACCAATGCTACGAGTCTACAACA 235264
Query 94133 ACGCGGCGCGCTACGTGGACCAGGGTGGTGGGAGGAGGAAGGGTTCTTTCGCGGTCTATC 94192
|| | || || ||||| ||||||||||| | | | ||| |||| || |||| |
Sbjct 235263 ACACTGCACGTTACGTTGACCAGGGTGGCAACAAGCGTCCAGGTGCTTTTGCCATCTACC 235204
Query 94193 TCGAGCCCTGGCACGCGGACGTGCAGGC-TTTCATCGACCTGCGAAAGAACCACGGCAAC 94251
| ||||| |||||||| ||||| || || ||||| ||||| || |||||||| || ||
Sbjct 235203 TTGAGCCGTGGCACGCAGACGT-CATGCAGTTCATGGACCTTCGCAAGAACCATGGAAAG 235145
Query 94252 GATCTGGAGAGGGCCAGAGACCTCTTCTACGCTCTCTGGGTGCCAGACCTTTTTATGAAA 94311
|| | | || | || | ||||||||||||||| | || || || |||||| |
Sbjct 235144 GAAGAAGTTCGTGCGCGCGATTTGTTCTACGCTCTCTGGATTCCCGATCTCTTTATGCAG 235085
Query 94312 CGCGTCGAGAAAAACTCCGCCTGGAGTCTTTTTTGTCCCAATGAATGTCCCGGACTGTCC 94371
|| ||||| | ||| | | |||| ||| | || ||||| ||||| || || |||||
Sbjct 235084 CGTGTCGAACAGAACGGCACTTGGACTCTAATGTGCCCCAACGAATGCCCTGGTCTGTCG 235025
Query 94372 GACGTTTGTGGATCGCGTTTTGAA-GACTTGTATGCTCGTTACGAATCGCAGGGCAAGGC 94430
|| || | || | || || || || |||| | ||||| || | |||||||
Sbjct 235024 GATGTCTACGG-TGACGAGTTCAAGGAGCTGTACGAGCGTTATGAGAGAGAAGGCAAGGG 234966
Query 94431 CAG---GAAGGTTATGGATGCTAGGAAGCTGTGGGATCAGATCGTGGACGTACAGGTGGA 94487
| | || |||| |||| ||| | ||| || || | || | ||| ||
Sbjct 234965 CCGTGAGACGGTT---CGTGCTCAGAAAATATGGTATGCTATTCTCGAGGCGCAGACCGA 234909
Query 94488 GACGGGTACGCCCTACATCTTGTTCAAGGACTCTGTCAACGCCAAGTCCAACCAGCAGCA 94547
||| || || || | ||| ||| ||||||| | | |||| |||| ||||||| || |
Sbjct 234908 GACCGGCACACCTTTCATTCTGTACAAGGACGCCGCCAACCGCAAGAGCAACCAGAAGAA 234849
Query 94548 CCTCGGGGTGATCAAGAGCTCGAATCTGTGCACCGAGATTGTCGAGTATACTTCTCCGGA 94607
|| || ||||||||||| ||| ||||||| ||||| | ||||| || |||||||
Sbjct 234848 TCTTGGCACCATCAAGAGCTCTAATTTGTGCACTGAGATCATGGAGTACTCTGCTCCGGA 234789
Query 94608 CGAGATTGCTGTGTGTAACCTGG 94630
||| | ||||| || || ||||
Sbjct 234788 TGAGGTCGCTGTCTGCAATCTGG 234766
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 494719675097200
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |