Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Dothistroma_20septosporum_20[genbank_20GCA_5F002236545.1_202017-07- 28] 570 sequences; 31,958,638 total letters Query= NC_011183.1 Length=154641 Score E Sequences producing significant alignments: (Bits) Value seq176 271 8e-68 >seq176 Length=431326 Score = 271 bits (300), Expect = 8e-68 Identities = 621/923 (67%), Gaps = 14/923 (2%) Strand=Plus/Minus Query 93715 AATTACGATTACTTTGCCTTCAAAACTCTGGAGAAGTCGTACCTCCTCAAGATGGATGGC 93774 || ||| | ||||| | |||||| ||||||||| || ||||| |||| || |||||| Sbjct 235681 AACTACCAATACTTCGGCTTCAAGACTCTGGAGCGATCATACCTTCTCAGAATTGATGGC 235622 Query 93775 AGGGTTTCCGAGCGACCGCACCAGCTGCTGATGCGCGTCGCCATCGGGATTCACGGCCAC 93834 | |||| ||||| ||||||| ||| || | ||||| || || |||| |||||||| | Sbjct 235621 AAGGTTGCCGAGAGACCGCAACAGATGATCATGCGTGTGGCTGTCGGCATTCACGGGGAA 235562 Query 93835 GACAT-GCCGAATGTTTTGCGGGCTTTCAGAGACATGCGGGACAAGAGGTATAC-CATGG 93892 ||||| | | | | | | | | | ||||| | ||| | || |||| Sbjct 235561 GACATTGAAGCAGCGATCGAGACATATAACT-ACATGTCGTTGAAGTACTTCACACATG- 235504 Query 93893 CCACCCCGACCCTGTTCAACGCGGGGACCCCGGTGCCACAGATGTCTTCGTGTTTCCTGA 93952 | | || || || |||| || || ||||| | | ||| | | || || ||| || Sbjct 235503 CTTCGCCAACACTTTTCAGTGCTGGTACCCCACAGGCGCAGCTAGCATCCTGCTTCTTGG 235444 Query 93953 TGACGAACAAGGCCGACTCCATCTCCGGAATTTTCGACAGCCTCAAGGACTGTGCGACCA 94012 || | | |||| ||| ||| || || | ||| | ||||||| ||||| | | Sbjct 235443 TGGCCATGAAGGATGACAGCATTGATGGTATCTACGATACCCTCAAGATATGTGCCATGA 235384 Query 94013 TCTCAAAATACGCGGGGGGAATCGGGATCAGTGTCCACGACGTACGTGCCAGGGGTTCCT 94072 |||| || |||| || || || || | ||| ||| || | | |||| || || | Sbjct 235383 TCTCCAAGAACGCTGGCGGTATTGGTCTTCATGTTCACAACATCAGGGCCACAGGCTCAT 235324 Query 94073 ACATCCGCGGTACCAATGGCACCTCCAACGGCCTCGTCCCTATGCTCCGGGTCTTCAACA 94132 |||| |||| || || ||||| |||||||| || || || ||||| || |||| ||||| Sbjct 235323 ACATTGGCGGCACAAACGGCACATCCAACGGTCTTGTACCAATGCTACGAGTCTACAACA 235264 Query 94133 ACGCGGCGCGCTACGTGGACCAGGGTGGTGGGAGGAGGAAGGGTTCTTTCGCGGTCTATC 94192 || | || || ||||| ||||||||||| | | | ||| |||| || |||| | Sbjct 235263 ACACTGCACGTTACGTTGACCAGGGTGGCAACAAGCGTCCAGGTGCTTTTGCCATCTACC 235204 Query 94193 TCGAGCCCTGGCACGCGGACGTGCAGGC-TTTCATCGACCTGCGAAAGAACCACGGCAAC 94251 | ||||| |||||||| ||||| || || ||||| ||||| || |||||||| || || Sbjct 235203 TTGAGCCGTGGCACGCAGACGT-CATGCAGTTCATGGACCTTCGCAAGAACCATGGAAAG 235145 Query 94252 GATCTGGAGAGGGCCAGAGACCTCTTCTACGCTCTCTGGGTGCCAGACCTTTTTATGAAA 94311 || | | || | || | ||||||||||||||| | || || || |||||| | Sbjct 235144 GAAGAAGTTCGTGCGCGCGATTTGTTCTACGCTCTCTGGATTCCCGATCTCTTTATGCAG 235085 Query 94312 CGCGTCGAGAAAAACTCCGCCTGGAGTCTTTTTTGTCCCAATGAATGTCCCGGACTGTCC 94371 || ||||| | ||| | | |||| ||| | || ||||| ||||| || || ||||| Sbjct 235084 CGTGTCGAACAGAACGGCACTTGGACTCTAATGTGCCCCAACGAATGCCCTGGTCTGTCG 235025 Query 94372 GACGTTTGTGGATCGCGTTTTGAA-GACTTGTATGCTCGTTACGAATCGCAGGGCAAGGC 94430 || || | || | || || || || |||| | ||||| || | ||||||| Sbjct 235024 GATGTCTACGG-TGACGAGTTCAAGGAGCTGTACGAGCGTTATGAGAGAGAAGGCAAGGG 234966 Query 94431 CAG---GAAGGTTATGGATGCTAGGAAGCTGTGGGATCAGATCGTGGACGTACAGGTGGA 94487 | | || |||| |||| ||| | ||| || || | || | ||| || Sbjct 234965 CCGTGAGACGGTT---CGTGCTCAGAAAATATGGTATGCTATTCTCGAGGCGCAGACCGA 234909 Query 94488 GACGGGTACGCCCTACATCTTGTTCAAGGACTCTGTCAACGCCAAGTCCAACCAGCAGCA 94547 ||| || || || | ||| ||| ||||||| | | |||| |||| ||||||| || | Sbjct 234908 GACCGGCACACCTTTCATTCTGTACAAGGACGCCGCCAACCGCAAGAGCAACCAGAAGAA 234849 Query 94548 CCTCGGGGTGATCAAGAGCTCGAATCTGTGCACCGAGATTGTCGAGTATACTTCTCCGGA 94607 || || ||||||||||| ||| ||||||| ||||| | ||||| || ||||||| Sbjct 234848 TCTTGGCACCATCAAGAGCTCTAATTTGTGCACTGAGATCATGGAGTACTCTGCTCCGGA 234789 Query 94608 CGAGATTGCTGTGTGTAACCTGG 94630 ||| | ||||| || || |||| Sbjct 234788 TGAGGTCGCTGTCTGCAATCTGG 234766 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 494719675097200