Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Dothistroma_20septosporum_20[genbank_20GCA_5F002236545.1_202017-07-
28] 570 sequences; 31,958,638 total letters
Query= NC_013668.3
Length=248526
Score E
Sequences producing significant alignments: (Bits) Value
seq176 134 2e-26
>seq176
Length=431326
Score = 134 bits (148), Expect = 2e-26
Identities = 444/673 (66%), Gaps = 22/673 (3%)
Strand=Plus/Plus
Query 204883 CTCCACGATCTCGGTGCACAAGTTACCGCACTTCACCACCCCCACATGCTGCTGGTTAGA 204942
||||| |||||| |||||||| ||| || ||| | || | || || ||||||
Sbjct 234803 CTCCATGATCTCAGTGCACAAATTAGAGCTCTTGATGGTGCCAAGATTCTTCTGGTTGCT 234862
Query 204943 CTTGCGGTTACAGGAGTCCTTGTACATCATGAACGGCATTCCGTTCTCCATCTGAGA-TC 205001
||||||||| || ||||||||||| ||||| || | ||| |||| |||| | ||
Sbjct 234863 CTTGCGGTTGGCGGCGTCCTTGTACAGAATGAAAGGTGTGCCGGTCTCGGTCTGCGCCTC 234922
Query 205002 GCAGAATGTGGGTCCACAATTCGCGAGCCTCCACTTGCTTCACGTACATC-CCTTGAGAC 205060
| ||||| ||| | || |||| || || |||| | | |||| |
Sbjct 234923 G-AGAATAGCATACCATATTTTCTGAGCACGAACCGTCT-CACGGCCCTTGCCTTCTCTC 234980
Query 205061 TCGTATTTTGTGTACAGCGCCACAAAGTCAGAACCGTACACGTCCATCAGCCCTGGACAT 205120
|| || ||||||| || || || |||||| || ||| ||| || || |||
Sbjct 234981 TCATAACGCTCGTACAGCTCCTTGAACTCGTCACCGTAGACATCCGACAGACCAGGGCAT 235040
Query 205121 TTTTTGGGACACATCAGAGACCACAT-CTGATCGTCTTTCACCCTCTCCATAAACAGGTC 205179
| ||||| ||||| |||| ||| | | | || | || || | || |||||| || ||
Sbjct 235041 TCGTTGGGGCACATTAGAGTCCAAGTGCCGTTC-TGTTCGACACGCTGCATAAAGAGATC 235099
Query 205180 GCTGATCCACAGGCCGTAAAACAGATCACGGGCCCTAATTCCGTCGTCTCCAAGGTTCTT 205239
| ||||| || |||| |||| ||| || || | || | | || | |||| |||||||
Sbjct 235100 GGGAATCCAGAGAGCGTAGAACAAATCGCGCGCACGAACTTCTTCCTTTCCATGGTTCTT 235159
Query 205240 TTTCAAGTCCAGCCAAGCCGCA--ATGTCGGCGTGCCACGGCTCTAACCACACGGCCATT 205297
| ||||| | | ||| | ||| |||||||||||||| | | | ||| |
Sbjct 235160 GCGAAGGTCCATGAA--CTGCATGACGTCTGCGTGCCACGGCTCAAGGTAGATGGCAAAA 235217
Query 205298 GCGCCTGGCCTCTTGTTCCCACCCTGGTCCAC----CATGCGAGTCATCGCGTTGAAAAC 205353
|| ||||| | |||||| ||||||||||| || | ||| ||| | |||| | ||
Sbjct 235218 GCACCTGGACGCTTGTTGCCACCCTGGTCAACGTAACGTGC-AGTGTT---GTTGTAGAC 235273
Query 205354 TCGCAGCATCGGCACCAGACCGTTGGCGGTCCCGTTCGTGCTGTTGATGGCCGAGCCTTC 205413
||| ||||| || || |||||||||| || ||||| |||| | ||| ||||||
Sbjct 235274 TCGTAGCATTGGTACAAGACCGTTGGATGTGCCGTTTGTGCCGCCAATGTATGAGCCTGT 235333
Query 205414 AGCCCTCACGTTG-GAGATGGCCGCGCCAATCCCGCCAGAACACTTGGCGATCTGGGCGC 205472
||||| | |||| || | | ||||| ||||||| ||||| |||| ||| |
Sbjct 235334 GGCCCTGATGTTGTGAACATGAAG-ACCAATACCGCCAGCGTTCTTGGAGATCATGGCAC 235392
Query 205473 A-CTCTTGCAGAGTGCTGTAGATGCCTGCGATGGAATCGTCCGCCAGTGTCACCAGATAG 205531
| ||||| || || |||||| || | ||| || ||| || | ||||| ||
Sbjct 235393 ATATCTTG-AGGGTATCGTAGATACCATCAATGCTGTCATCCTTCATGGCCACCAAGAAG 235451
Query 205532 CACGAAGCCAGCT 205544
|| || || ||||
Sbjct 235452 CAGGATGCTAGCT 235464
Score = 86.0 bits (94), Expect = 1e-11
Identities = 222/336 (66%), Gaps = 2/336 (1%)
Strand=Plus/Plus
Query 204185 GGGTTGATGATCTGAAAGTCTCCGGACAGCACCCCTCGGGTGAACAGGTTGTTGGTGAAT 204244
||||||| || ||| || || || | || ||| | || | | | | |||| | ||| ||
Sbjct 234186 GGGTTGACGACCTGGAACTCGCCAGCCAACACACGACGAGAGTAAATGTTGCTTGTGTAT 234245
Query 204245 GGTTCGAACGCCTCGTTGTTGCCGAAAATCTGAGCGGTGCTGGCCGTGGGCATGGGAGCC 204304
|| ||||| |||||| ||| | ||||| | ||| ||| || ||||| || ||
Sbjct 234246 GGCTCGAAGCACTCGTTAAAGCCCATGATCTGCGAGGTCGAGGCTGTTGGCATCGGCGCA 234305
Query 204305 AGGAGCAGGGAGTTGCGCACACCGTATTTTTGGACCCTGCGCTTCAGAGAGGTCCAGTCG 204364
| ||| || |||||||||||||||| | || | ||| ||| || | || ||||||
Sbjct 234306 ACGAGAAGCGAGTTGCGCACACCGTGCTGGGCGATCTTGCCCTTGAGTGCGGCCCAGTCC 234365
Query 204365 TGCATCGCACTGGGTTTCACGCCCCACATGTCGAACTGAAAGATGCCTTGACTGACTGGG 204424
| | | || || ||||||||||||| |||| | ||| || |||||
Sbjct 234366 CAGAGGTCGGTAGGAGTCTTGCCCCACATGTCGTACTGGAGCTCGCCCTGCGATACTGGA 234425
Query 204425 CTGCCCTTGTACGTCGGATAAGG-CTGATCCTCTTCTGCCAGCTTGCACGAGGCGGCCAT 204483
||| ||| ||| ||||| | || | || || || |||| ||| || || | |
Sbjct 234426 GAGCCTGGGTATGTCTCGTAAGGACCGAGCTTC-TCAGCAAGCTCGCATGAAGCCTCAAG 234484
Query 204484 GGCGTGATAGTACATGGTCTCAAAGATCTGAACGTT 204519
|| || || ||||||||||| ||||| | |||
Sbjct 234485 AGCAGCATGATAGATGGTCTCAAAAATCTGGATGTT 234520
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 795149534519200
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |