Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Dothistroma_20septosporum_20[genbank_20GCA_5F002236545.1_202017-07- 28] 570 sequences; 31,958,638 total letters Query= NC_014765.1 Length=198519 Score E Sequences producing significant alignments: (Bits) Value seq559 255 7e-63 seq332 132 6e-26 seq544 109 7e-19 >seq559 Length=875383 Score = 255 bits (282), Expect = 7e-63 Identities = 478/701 (68%), Gaps = 6/701 (1%) Strand=Plus/Plus Query 7457 TCGAAATCTTCACCACCCAAGTGTGTATCCCCCGCGGTCGCTTTGACTTCAAAGATACCT 7516 ||||| || |||||||||||||| || || || || || | ||||| || || ||||| Sbjct 58447 TCGAAGTCCTCACCACCCAAGTGAGTGTCACCAGCAGTGGACTTGACCTCGAAAATACCC 58506 Query 7517 CCTTCAATGTTTAACAACGAAACATCAAACGTACCACCACCCAGGTCAAAAATGAGTACG 7576 | || || | | || ||| ||||| || ||||||||||| || || || ||||| || Sbjct 58507 TCCTCGATTGTGAGCAGCGACACATCGAAGGTACCACCACCAAGATCGAAGATGAGCACA 58566 Query 7577 TTCGTATCGTCGTCTTTGTTCTTATCGAGACCGTACGCGATAGCCGCCGCCGTTGGTTCA 7636 || ||| | || | ||||| ||||||||||| || || || || || ||||| ||| Sbjct 58567 TTGCGCTCGCCCTCAGTCTTCTTGTCGAGACCGTAGGCAATGGCTGCTGCAGTTGGCTCA 58626 Query 7637 TTAATAATACGAAGACAGTTCAGGCCAGCAATAGTTGCCGCATCTTTCGTCGCTTGTCGT 7696 || || ||||| || ||| ||||||||||| | || || || || |||||||| Sbjct 58627 TTGATGATACGGAGGACGTTGAGGCCAGCAATGAGACCGGCGTCCTTTGTTGCTTGTCGC 58686 Query 7697 TGCGAATCGTTAAAGTAGGCCGGGACCGTTACGACCGCGTCCGTGACTTTCTTACCGAGA 7756 ||||| ||||| || || || || ||||| ||||| |||| |||| | ||| || Sbjct 58687 TGCGAGTCGTTGAAATATGCTGGAACCGTGACGACGGCGTTGTTGACGGTGCCACCAAGG 58746 Query 7757 TACGATTCCGCGATATCTTTCATTTTGGTAAGAACCATCGATGAAATCTCTTCAGCCGCA 7816 ||||| || ||| | || ||| || || || | ||| | || ||||| || | | Sbjct 58747 TACGACTCTGCGGTCTCACGCATCTTTGTGAGGATCATGGCGGAGATCTCCTCTGGTGTG 58806 Query 7817 AACTGTTTCGTTTCACCGTTAAAATCAACTTCAATCATGGGTTTATCCGCAGCACCGGGG 7876 ||||| ||| || || || || || || || | || || |||| | Sbjct 58807 AACTGCTTCTCCTCGCCCTTGAACTCGACCGAGATGACTGGCTT---GCCAGCCTTCTCG 58863 Query 7877 ATAACCTTATACGACCAATCTTTCATATCGTCTTGGACCTGTTGGTCCGAAAACTTTCTT 7936 || ||||| | | | | ||||| || |||| |||| | ||| ||||| | Sbjct 58864 ATGACCTTGAAGGGAAAGTGCTTCATGTCTGCTTGCACCTCTGCGTCTTGGAACTTGCGG 58923 Query 7937 CCGATAAGACGCTTTGCATCAAAAACTGTGTTTTTGGGGTTCATGGCTGTTTGGTTCTTC 7996 ||||| | |||||||| || || ||||||||| ||||||||||| || ||||| Sbjct 58924 CCGATCAATCGCTTTGCGTCGAAGACTGTGTTTGCTGGGTTCATGGCGACCTGATTCTTG 58983 Query 7997 GCCGCGTCCCCGATAAGACGTTCATTATTTTCCGTAAACGCGACGTACGATGGGGTCGTT 8056 || || || ||||| ||||| || | || || || |||||| | || || || || Sbjct 58984 GCGGCATCACCGATCAGACGCTC---GGTGTCTGTGAAGGCGACGAATGAGGGTGTTGTG 59040 Query 8057 CGATTCCCTTGGTCGTTCGCAATAATTTCTACGCGGTCGTTTTGCCAGACGCCGACGCAC 8116 || || || || ||||| || || || || | ||| || | | ||| || ||||| Sbjct 59041 CGGTTGCCCTGATCGTTGGCGATGATCTCAATGCGATCATCTCTGAAGATACCCACGCAA 59100 Query 8117 GAATACGTTGTTCCTAAATCAATACCGATTGCTTGAGTCAT 8157 || ||||| || || || || |||||||||||| | | ||| Sbjct 59101 GAGTACGTGGTACCCAAGTCGATACCGATTGCTGGTGCCAT 59141 >seq332 Length=1128337 Score = 132 bits (146), Expect = 6e-26 Identities = 211/302 (70%), Gaps = 3/302 (1%) Strand=Plus/Minus Query 7457 TCGAAATCTTCACCACCCAAGTGTGTATCCCCCGCGGTCGCTTTGACTTCAAAGATACCT 7516 |||||||| | ||||||||| || || || || ||||| || ||||| |||| ||| Sbjct 262841 TCGAAATCCTGACCACCCAAATGGGTGTCACCAGCGGTAGCCTTGACAGTGAAGACACCG 262782 Query 7517 CCTTCAATGTTTAACAACGAAACATCAAACGTACCACCACCCAGGTCAAAAATGAGTACG 7576 || | ||||| | | || ||||| || ||||||||||| || || | ||||| ||| Sbjct 262781 CCCTGAATGTGAAGAAGGGAGACATCGAAAGTACCACCACCAAGATCGTAGATGAGGACG 262722 Query 7577 TTCGTATCGTCGTC---TTTGTTCTTATCGAGACCGTACGCGATAGCCGCCGCCGTTGGT 7633 || || | ||| ||| ||||||| || |||||||| || || ||||| Sbjct 262721 TTTCGCTCCTTGTCAGACTTGCCGGAGCCGAGACCATATGCGATAGCAGCGGCAGTTGGC 262662 Query 7634 TCATTAATAATACGAAGACAGTTCAGGCCAGCAATAGTTGCCGCATCTTTCGTCGCTTGT 7693 || || ||||| || ||| ||| || ||||| || | | || || || || |||||| Sbjct 262661 TCGTTGATAATGCGGAGAACGTTGAGTCCAGCGATGGCACCAGCGTCCTTGGTGGCTTGT 262602 Query 7694 CGTTGCGAATCGTTAAAGTAGGCCGGGACCGTTACGACCGCGTCCGTGACTTTCTTACCG 7753 | || |||||| ||||| || ||||| || | ||| || | | ||| ||||| ||| Sbjct 262601 CTCTGGTTATCGTTGAAGTAAGCTGGGACGGTAATGACGGCCTTCTCGACCTTCTTGCCG 262542 Query 7754 AG 7755 || Sbjct 262541 AG 262540 >seq544 Length=72249 Score = 109 bits (120), Expect = 7e-19 Identities = 240/356 (67%), Gaps = 9/356 (3%) Strand=Plus/Minus Query 7457 TCGAAATCTTCACCACCCAAGTGTGTATCCCCCGCGGTCGCTTTGACTTCAAAGATACCT 7516 |||||||| |||||||| | || || || || || || || | || || || | || Sbjct 41664 TCGAAATCCTCACCACCAAGATGGGTGTCACCGGCCGTTGCCTGAACCTCGAACACGCCC 41605 Query 7517 CCTTCAATGTTTAACAACGAAACATCAAACGTACCACCACCCAGGTC---AAAAATGAGT 7573 || | | || | || ||||| || ||||||||||| ||||| | ||||| Sbjct 41604 TGGTCGACAGTCAAGATGGAGACATCGAAAGTACCACCACCAAGGTCGTAGACAATGA-- 41547 Query 7574 ACGTTCGTATCGTCGTCTTTGTTCTTATCGAGACCGTACGCGATAGCCGCCGCCGTTGGT 7633 | ||| || | ||| | |||| ||||| ||||| |||| ||| || || || ||| Sbjct 41546 TCTGGCGT-TCCTTGTC---GGTCTTGTCGAGGCCGTAGGCGAGAGCGGCGGCGGTAGGT 41491 Query 7634 TCATTAATAATACGAAGACAGTTCAGGCCAGCAATAGTTGCCGCATCTTTCGTCGCTTGT 7693 || || | | ||| || ||| || || || || || | || || || || || Sbjct 41490 TCGTTGACGACACGGAGGACGTTGAGACCGGCGATCGTGCCAGCGTCCTTGGTAGCGGCA 41431 Query 7694 CGTTGCGAATCGTTAAAGTAGGCCGGGACCGTTACGACCGCGTCCGTGACTTTCTTACCG 7753 || || | ||||| |||||||| ||||| || ||||| |||| ||||| || | ||| Sbjct 41430 CGCTGGGCGTCGTTGAAGTAGGCTGGGACTGTGACGACTGCGTTGGTGACCTTTTCGCCG 41371 Query 7754 AGATACGATTCCGCGATATCTTTCATTTTGGTAAGAACCATCGATGAAATCTCTTC 7809 || || || || |||| || ||||| ||| || | ||| ||||| | |||||| Sbjct 41370 AGGTATGACTCGGCGACTTCCTTCATCTTGCCCAGGATCATGGATGAGACCTCTTC 41315 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 635128274678800