Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Dothistroma_20septosporum_20[genbank_20GCA_5F002236545.1_202017-07-
28] 570 sequences; 31,958,638 total letters
Query= NC_014765.1
Length=198519
Score E
Sequences producing significant alignments: (Bits) Value
seq559 255 7e-63
seq332 132 6e-26
seq544 109 7e-19
>seq559
Length=875383
Score = 255 bits (282), Expect = 7e-63
Identities = 478/701 (68%), Gaps = 6/701 (1%)
Strand=Plus/Plus
Query 7457 TCGAAATCTTCACCACCCAAGTGTGTATCCCCCGCGGTCGCTTTGACTTCAAAGATACCT 7516
||||| || |||||||||||||| || || || || || | ||||| || || |||||
Sbjct 58447 TCGAAGTCCTCACCACCCAAGTGAGTGTCACCAGCAGTGGACTTGACCTCGAAAATACCC 58506
Query 7517 CCTTCAATGTTTAACAACGAAACATCAAACGTACCACCACCCAGGTCAAAAATGAGTACG 7576
| || || | | || ||| ||||| || ||||||||||| || || || ||||| ||
Sbjct 58507 TCCTCGATTGTGAGCAGCGACACATCGAAGGTACCACCACCAAGATCGAAGATGAGCACA 58566
Query 7577 TTCGTATCGTCGTCTTTGTTCTTATCGAGACCGTACGCGATAGCCGCCGCCGTTGGTTCA 7636
|| ||| | || | ||||| ||||||||||| || || || || || ||||| |||
Sbjct 58567 TTGCGCTCGCCCTCAGTCTTCTTGTCGAGACCGTAGGCAATGGCTGCTGCAGTTGGCTCA 58626
Query 7637 TTAATAATACGAAGACAGTTCAGGCCAGCAATAGTTGCCGCATCTTTCGTCGCTTGTCGT 7696
|| || ||||| || ||| ||||||||||| | || || || || ||||||||
Sbjct 58627 TTGATGATACGGAGGACGTTGAGGCCAGCAATGAGACCGGCGTCCTTTGTTGCTTGTCGC 58686
Query 7697 TGCGAATCGTTAAAGTAGGCCGGGACCGTTACGACCGCGTCCGTGACTTTCTTACCGAGA 7756
||||| ||||| || || || || ||||| ||||| |||| |||| | ||| ||
Sbjct 58687 TGCGAGTCGTTGAAATATGCTGGAACCGTGACGACGGCGTTGTTGACGGTGCCACCAAGG 58746
Query 7757 TACGATTCCGCGATATCTTTCATTTTGGTAAGAACCATCGATGAAATCTCTTCAGCCGCA 7816
||||| || ||| | || ||| || || || | ||| | || ||||| || | |
Sbjct 58747 TACGACTCTGCGGTCTCACGCATCTTTGTGAGGATCATGGCGGAGATCTCCTCTGGTGTG 58806
Query 7817 AACTGTTTCGTTTCACCGTTAAAATCAACTTCAATCATGGGTTTATCCGCAGCACCGGGG 7876
||||| ||| || || || || || || || | || || |||| |
Sbjct 58807 AACTGCTTCTCCTCGCCCTTGAACTCGACCGAGATGACTGGCTT---GCCAGCCTTCTCG 58863
Query 7877 ATAACCTTATACGACCAATCTTTCATATCGTCTTGGACCTGTTGGTCCGAAAACTTTCTT 7936
|| ||||| | | | | ||||| || |||| |||| | ||| ||||| |
Sbjct 58864 ATGACCTTGAAGGGAAAGTGCTTCATGTCTGCTTGCACCTCTGCGTCTTGGAACTTGCGG 58923
Query 7937 CCGATAAGACGCTTTGCATCAAAAACTGTGTTTTTGGGGTTCATGGCTGTTTGGTTCTTC 7996
||||| | |||||||| || || ||||||||| ||||||||||| || |||||
Sbjct 58924 CCGATCAATCGCTTTGCGTCGAAGACTGTGTTTGCTGGGTTCATGGCGACCTGATTCTTG 58983
Query 7997 GCCGCGTCCCCGATAAGACGTTCATTATTTTCCGTAAACGCGACGTACGATGGGGTCGTT 8056
|| || || ||||| ||||| || | || || || |||||| | || || || ||
Sbjct 58984 GCGGCATCACCGATCAGACGCTC---GGTGTCTGTGAAGGCGACGAATGAGGGTGTTGTG 59040
Query 8057 CGATTCCCTTGGTCGTTCGCAATAATTTCTACGCGGTCGTTTTGCCAGACGCCGACGCAC 8116
|| || || || ||||| || || || || | ||| || | | ||| || |||||
Sbjct 59041 CGGTTGCCCTGATCGTTGGCGATGATCTCAATGCGATCATCTCTGAAGATACCCACGCAA 59100
Query 8117 GAATACGTTGTTCCTAAATCAATACCGATTGCTTGAGTCAT 8157
|| ||||| || || || || |||||||||||| | | |||
Sbjct 59101 GAGTACGTGGTACCCAAGTCGATACCGATTGCTGGTGCCAT 59141
>seq332
Length=1128337
Score = 132 bits (146), Expect = 6e-26
Identities = 211/302 (70%), Gaps = 3/302 (1%)
Strand=Plus/Minus
Query 7457 TCGAAATCTTCACCACCCAAGTGTGTATCCCCCGCGGTCGCTTTGACTTCAAAGATACCT 7516
|||||||| | ||||||||| || || || || ||||| || ||||| |||| |||
Sbjct 262841 TCGAAATCCTGACCACCCAAATGGGTGTCACCAGCGGTAGCCTTGACAGTGAAGACACCG 262782
Query 7517 CCTTCAATGTTTAACAACGAAACATCAAACGTACCACCACCCAGGTCAAAAATGAGTACG 7576
|| | ||||| | | || ||||| || ||||||||||| || || | ||||| |||
Sbjct 262781 CCCTGAATGTGAAGAAGGGAGACATCGAAAGTACCACCACCAAGATCGTAGATGAGGACG 262722
Query 7577 TTCGTATCGTCGTC---TTTGTTCTTATCGAGACCGTACGCGATAGCCGCCGCCGTTGGT 7633
|| || | ||| ||| ||||||| || |||||||| || || |||||
Sbjct 262721 TTTCGCTCCTTGTCAGACTTGCCGGAGCCGAGACCATATGCGATAGCAGCGGCAGTTGGC 262662
Query 7634 TCATTAATAATACGAAGACAGTTCAGGCCAGCAATAGTTGCCGCATCTTTCGTCGCTTGT 7693
|| || ||||| || ||| ||| || ||||| || | | || || || || ||||||
Sbjct 262661 TCGTTGATAATGCGGAGAACGTTGAGTCCAGCGATGGCACCAGCGTCCTTGGTGGCTTGT 262602
Query 7694 CGTTGCGAATCGTTAAAGTAGGCCGGGACCGTTACGACCGCGTCCGTGACTTTCTTACCG 7753
| || |||||| ||||| || ||||| || | ||| || | | ||| ||||| |||
Sbjct 262601 CTCTGGTTATCGTTGAAGTAAGCTGGGACGGTAATGACGGCCTTCTCGACCTTCTTGCCG 262542
Query 7754 AG 7755
||
Sbjct 262541 AG 262540
>seq544
Length=72249
Score = 109 bits (120), Expect = 7e-19
Identities = 240/356 (67%), Gaps = 9/356 (3%)
Strand=Plus/Minus
Query 7457 TCGAAATCTTCACCACCCAAGTGTGTATCCCCCGCGGTCGCTTTGACTTCAAAGATACCT 7516
|||||||| |||||||| | || || || || || || || | || || || | ||
Sbjct 41664 TCGAAATCCTCACCACCAAGATGGGTGTCACCGGCCGTTGCCTGAACCTCGAACACGCCC 41605
Query 7517 CCTTCAATGTTTAACAACGAAACATCAAACGTACCACCACCCAGGTC---AAAAATGAGT 7573
|| | | || | || ||||| || ||||||||||| ||||| | |||||
Sbjct 41604 TGGTCGACAGTCAAGATGGAGACATCGAAAGTACCACCACCAAGGTCGTAGACAATGA-- 41547
Query 7574 ACGTTCGTATCGTCGTCTTTGTTCTTATCGAGACCGTACGCGATAGCCGCCGCCGTTGGT 7633
| ||| || | ||| | |||| ||||| ||||| |||| ||| || || || |||
Sbjct 41546 TCTGGCGT-TCCTTGTC---GGTCTTGTCGAGGCCGTAGGCGAGAGCGGCGGCGGTAGGT 41491
Query 7634 TCATTAATAATACGAAGACAGTTCAGGCCAGCAATAGTTGCCGCATCTTTCGTCGCTTGT 7693
|| || | | ||| || ||| || || || || || | || || || || ||
Sbjct 41490 TCGTTGACGACACGGAGGACGTTGAGACCGGCGATCGTGCCAGCGTCCTTGGTAGCGGCA 41431
Query 7694 CGTTGCGAATCGTTAAAGTAGGCCGGGACCGTTACGACCGCGTCCGTGACTTTCTTACCG 7753
|| || | ||||| |||||||| ||||| || ||||| |||| ||||| || | |||
Sbjct 41430 CGCTGGGCGTCGTTGAAGTAGGCTGGGACTGTGACGACTGCGTTGGTGACCTTTTCGCCG 41371
Query 7754 AGATACGATTCCGCGATATCTTTCATTTTGGTAAGAACCATCGATGAAATCTCTTC 7809
|| || || || |||| || ||||| ||| || | ||| ||||| | ||||||
Sbjct 41370 AGGTATGACTCGGCGACTTCCTTCATCTTGCCCAGGATCATGGATGAGACCTCTTC 41315
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 635128274678800
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |